RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 LRFN2Q9ULH4 789 aa12.18□□□□□ -0.46
ITGA4-205ENST00000468948 CENPCQ03188 943 aa12.17□□□□□ -0.46
ITGA4-205ENST00000468948 TEAD4Q15561 434 aa12.17□□□□□ -0.46
ITGA4-205ENST00000468948 SPRYD7Q5W111 196 aa12.17□□□□□ -0.46
ITGA4-205ENST00000468948 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
ITGA4-205ENST00000468948 MYO19Q96H55 970 aa12.17□□□□□ -0.46
ITGA4-205ENST00000468948 CITED4Q96RK1 184 aa12.17□□□□□ -0.46
ITGA4-205ENST00000468948 FZD6O60353 706 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 P4HBP07237 508 aaKnown RBP12.16□□□□□ -0.46
ITGA4-205ENST00000468948 VAMP1P23763 118 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 PTGIRP43119 386 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 FOXC1Q12948 553 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 CABP1Q9NZU7 370 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
ITGA4-205ENST00000468948 MEN1O00255 615 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 EML1O00423 815 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
ITGA4-205ENST00000468948 NOS2P35228 1153 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 POTEAQ6S8J7 498 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 NLRP3Q96P20 1036 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
ITGA4-205ENST00000468948 TREHO43280 583 aa12.14□□□□□ -0.47
ITGA4-205ENST00000468948 TCF3P15923 654 aa12.14□□□□□ -0.47
ITGA4-205ENST00000468948 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
ITGA4-205ENST00000468948 ZNF697Q5TEC3 545 aa12.14□□□□□ -0.47
ITGA4-205ENST00000468948 Q6ZVU0 165 aa12.14□□□□□ -0.47
ITGA4-205ENST00000468948 AGBL1Q96MI9 1066 aa12.14□□□□□ -0.47
ITGA4-205ENST00000468948 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
ITGA4-205ENST00000468948 PLCB3Q01970 1234 aa12.13□□□□□ -0.47
ITGA4-205ENST00000468948 ALDH16A1Q8IZ83 802 aa12.13□□□□□ -0.47
ITGA4-205ENST00000468948 ZDHHC1Q8WTX9 485 aa12.13□□□□□ -0.47
ITGA4-205ENST00000468948 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
ITGA4-205ENST00000468948 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
ITGA4-205ENST00000468948 ZBTB39O15060 712 aa12.12□□□□□ -0.47
ITGA4-205ENST00000468948 ZIC2O95409 532 aaPredicted RBP12.12□□□□□ -0.47
ITGA4-205ENST00000468948 ZNF598Q86UK7 904 aaKnown RBP12.12□□□□□ -0.47
ITGA4-205ENST00000468948 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
ITGA4-205ENST00000468948 L3MBTL2Q969R5 705 aa12.12□□□□□ -0.47
ITGA4-205ENST00000468948 DMRTB1Q96MA1 342 aa12.12□□□□□ -0.47
ITGA4-205ENST00000468948 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
ITGA4-205ENST00000468948 FMR1Q06787 632 aaKnown RBP eCLIP12.11□□□□□ -0.47
ITGA4-205ENST00000468948 C11orf91Q3C1V1 193 aa12.11□□□□□ -0.47
ITGA4-205ENST00000468948 ATCAYQ86WG3 371 aa12.11□□□□□ -0.47
ITGA4-205ENST00000468948 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
ITGA4-205ENST00000468948 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
ITGA4-205ENST00000468948 RELBQ01201 579 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 PDE3BQ13370 1112 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 DGKZQ13574 1117 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 DSC3Q14574 896 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 RTN1Q16799 776 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 FAM26DQ5JW98 314 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
ITGA4-205ENST00000468948 ZNF395Q9H8N7 513 aaPredicted RBP12.1□□□□□ -0.47
ITGA4-205ENST00000468948 ZFAND3Q9H8U3 227 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 PKD2L1Q9P0L9 805 aa12.1□□□□□ -0.47
ITGA4-205ENST00000468948 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
ITGA4-205ENST00000468948 MAPK8P45983 427 aa12.09□□□□□ -0.47
ITGA4-205ENST00000468948 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
ITGA4-205ENST00000468948 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
ITGA4-205ENST00000468948 TMEM214Q6NUQ4 689 aaKnown RBP12.09□□□□□ -0.47
ITGA4-205ENST00000468948 FAM129BQ96TA1 746 aa12.09□□□□□ -0.47
ITGA4-205ENST00000468948 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
ITGA4-205ENST00000468948 NIFKQ9BYG3 293 aaKnown RBP12.09□□□□□ -0.47
ITGA4-205ENST00000468948 EHHADHQ08426 723 aa12.08□□□□□ -0.48
ITGA4-205ENST00000468948 ZNF295-AS1Q8N0V1 137 aa12.08□□□□□ -0.48
ITGA4-205ENST00000468948 PHACTR1Q9C0D0 580 aa12.08□□□□□ -0.48
ITGA4-205ENST00000468948 KLK14Q9P0G3 267 aa12.08□□□□□ -0.48
ITGA4-205ENST00000468948 POLIQ9UNA4 740 aa12.08□□□□□ -0.48
ITGA4-205ENST00000468948 RECKO95980 971 aa12.07□□□□□ -0.48
ITGA4-205ENST00000468948 TSNAXIP1Q2TAA8 658 aa12.07□□□□□ -0.48
ITGA4-205ENST00000468948 ETFBKMTQ8IXQ9 262 aa12.07□□□□□ -0.48
ITGA4-205ENST00000468948 IFT43Q96FT9 208 aa12.07□□□□□ -0.48
ITGA4-205ENST00000468948 TTC24A2A3L6 582 aaPredicted RBP12.06□□□□□ -0.48
ITGA4-205ENST00000468948 J3QL48 77 aa12.06□□□□□ -0.48
ITGA4-205ENST00000468948 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
ITGA4-205ENST00000468948 FGD1P98174 961 aa12.06□□□□□ -0.48
ITGA4-205ENST00000468948 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
ITGA4-205ENST00000468948 EDEM1Q92611 657 aa12.06□□□□□ -0.48
ITGA4-205ENST00000468948 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
ITGA4-205ENST00000468948 GPR182O15218 404 aa12.05□□□□□ -0.48
ITGA4-205ENST00000468948 IGHA2P01877 340 aa12.05□□□□□ -0.48
ITGA4-205ENST00000468948 MZF1P28698 734 aaPredicted RBP12.05□□□□□ -0.48
ITGA4-205ENST00000468948 ZAP70P43403 619 aa12.05□□□□□ -0.48
ITGA4-205ENST00000468948 RHBDD1Q8TEB9 315 aa12.05□□□□□ -0.48
ITGA4-205ENST00000468948 TIMP2P16035 220 aa12.04□□□□□ -0.48
ITGA4-205ENST00000468948 XPCQ01831 940 aaPredicted RBP12.04□□□□□ -0.48
ITGA4-205ENST00000468948 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
ITGA4-205ENST00000468948 CYP4X1Q8N118 509 aa12.04□□□□□ -0.48
ITGA4-205ENST00000468948 ALKBH8Q96BT7 664 aaKnown RBP12.04□□□□□ -0.48
ITGA4-205ENST00000468948 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
ITGA4-205ENST00000468948 USP5P45974 858 aa12.03□□□□□ -0.48
ITGA4-205ENST00000468948 GJD3Q8N144 294 aa12.03□□□□□ -0.48
ITGA4-205ENST00000468948 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
ITGA4-205ENST00000468948 PRPF40AO75400 957 aaKnown RBP12.02□□□□□ -0.49
ITGA4-205ENST00000468948 ATP2B2Q01814 1243 aa12.02□□□□□ -0.49
ITGA4-205ENST00000468948 MRPL58Q14197 206 aaKnown RBP12.02□□□□□ -0.49
ITGA4-205ENST00000468948 GNASQ5JWF2 1037 aa12.02□□□□□ -0.49
ITGA4-205ENST00000468948 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms