RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 CNTNAP3Q9BZ76 1288 aa7.9□□□□□ -1.14
GPNMB-207ENST00000468723 TSPAN10Q9H1Z9 355 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-207ENST00000468723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-207ENST00000468723 H7C1W4 665 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 SEC13P55735 322 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 KRT76Q01546 638 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 ZNF295-AS1Q8N0V1 137 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 ZDHHC1Q8WTX9 485 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 NUCKS1Q9H1E3 243 aaKnown RBP7.89□□□□□ -1.15
GPNMB-207ENST00000468723 ZNF232Q9UNY5 417 aa7.89□□□□□ -1.15
GPNMB-207ENST00000468723 FAM196BA6NMK8 535 aa7.88□□□□□ -1.15
GPNMB-207ENST00000468723 THBS1P07996 1170 aa7.88□□□□□ -1.15
GPNMB-207ENST00000468723 CSB-PGBD3P0DP91 1061 aa7.88□□□□□ -1.15
GPNMB-207ENST00000468723 FOXK2Q01167 660 aa7.88□□□□□ -1.15
GPNMB-207ENST00000468723 PGBD3Q8N328 593 aa7.88□□□□□ -1.15
GPNMB-207ENST00000468723 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
GPNMB-207ENST00000468723 NOS2P35228 1153 aa7.87□□□□□ -1.15
GPNMB-207ENST00000468723 SH3PXD2AQ5TCZ1 1133 aa7.87□□□□□ -1.15
GPNMB-207ENST00000468723 CCDC82Q8N4S0 544 aa7.87□□□□□ -1.15
GPNMB-207ENST00000468723 L3MBTL2Q969R5 705 aa7.87□□□□□ -1.15
GPNMB-207ENST00000468723 C1orf115Q9H7X2 142 aa7.87□□□□□ -1.15
GPNMB-207ENST00000468723 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
GPNMB-207ENST00000468723 M0R2N6 131 aa7.86□□□□□ -1.15
GPNMB-207ENST00000468723 ATP4AP20648 1035 aa7.86□□□□□ -1.15
GPNMB-207ENST00000468723 TXLNAP40222 546 aa7.86□□□□□ -1.15
GPNMB-207ENST00000468723 NBPF1Q3BBV0 1214 aa7.86□□□□□ -1.15
GPNMB-207ENST00000468723 ARSJQ5FYB0 599 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-207ENST00000468723 FOXR1Q6PIV2 292 aa7.86□□□□□ -1.15
GPNMB-207ENST00000468723 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-207ENST00000468723 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
GPNMB-207ENST00000468723 PPP1R12BO60237 982 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-207ENST00000468723 INSM1Q01101 510 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-207ENST00000468723 GAS6Q14393 721 aa7.85□□□□□ -1.15
GPNMB-207ENST00000468723 TEAD4Q15561 434 aa7.85□□□□□ -1.15
GPNMB-207ENST00000468723 FAM200AQ8TCP9 573 aa7.85□□□□□ -1.15
GPNMB-207ENST00000468723 SCG3Q8WXD2 468 aaKnown RBP7.85□□□□□ -1.15
GPNMB-207ENST00000468723 ARXQ96QS3 562 aa7.85□□□□□ -1.15
GPNMB-207ENST00000468723 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
GPNMB-207ENST00000468723 ATAD2Q6PL18 1390 aa7.84□□□□□ -1.15
GPNMB-207ENST00000468723 SERTM1A2A2V5 107 aa7.84□□□□□ -1.15
GPNMB-207ENST00000468723 TATP17735 454 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-207ENST00000468723 EFHC2Q5JST6 749 aa7.84□□□□□ -1.15
GPNMB-207ENST00000468723 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
GPNMB-207ENST00000468723 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
GPNMB-207ENST00000468723 TIMELESSQ9UNS1 1208 aa7.84□□□□□ -1.15
GPNMB-207ENST00000468723 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
GPNMB-207ENST00000468723 A0A1W2PNR3 127 aa7.83□□□□□ -1.16
GPNMB-207ENST00000468723 SUPT5HO00267 1087 aaKnown RBP7.83□□□□□ -1.16
GPNMB-207ENST00000468723 C21orf2O43822 256 aa7.83□□□□□ -1.16
GPNMB-207ENST00000468723 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
GPNMB-207ENST00000468723 SRPK2P78362 688 aaKnown RBP7.83□□□□□ -1.16
GPNMB-207ENST00000468723 ZSCAN1Q8NBB4 408 aa7.83□□□□□ -1.16
GPNMB-207ENST00000468723 ZIC5Q96T25 663 aa7.83□□□□□ -1.16
GPNMB-207ENST00000468723 CRISPLD1Q9H336 500 aa7.83□□□□□ -1.16
GPNMB-207ENST00000468723 CHMP3Q9Y3E7 222 aa7.83□□□□□ -1.16
GPNMB-207ENST00000468723 EML1O00423 815 aa7.82□□□□□ -1.16
GPNMB-207ENST00000468723 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
GPNMB-207ENST00000468723 UBAP2LQ14157 1087 aaKnown RBP7.82□□□□□ -1.16
GPNMB-207ENST00000468723 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
GPNMB-207ENST00000468723 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
GPNMB-207ENST00000468723 ZDHHC3Q9NYG2 299 aa7.82□□□□□ -1.16
GPNMB-207ENST00000468723 PBXIP1Q96AQ6 731 aa7.81□□□□□ -1.16
GPNMB-207ENST00000468723 KLRG1Q96E93 195 aa7.81□□□□□ -1.16
GPNMB-207ENST00000468723 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
GPNMB-207ENST00000468723 NGLY1Q96IV0 654 aa7.81□□□□□ -1.16
GPNMB-207ENST00000468723 ZMIZ1Q9ULJ6 1067 aa7.81□□□□□ -1.16
GPNMB-207ENST00000468723 GJA3Q9Y6H8 435 aa7.81□□□□□ -1.16
GPNMB-207ENST00000468723 BNIP3LO60238 219 aa7.8□□□□□ -1.16
GPNMB-207ENST00000468723 STK32AQ8WU08 396 aa7.8□□□□□ -1.16
GPNMB-207ENST00000468723 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
GPNMB-207ENST00000468723 ADAMTS2O95450 1211 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 MX2P20592 715 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 LBRQ14739 615 aaKnown RBP7.79□□□□□ -1.16
GPNMB-207ENST00000468723 LRRC69Q6ZNQ3 347 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 NLRP8Q86W28 1048 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 RHPN1Q8TCX5 695 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 C2orf49Q9BVC5 232 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-207ENST00000468723 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 MBIPQ9NS73 344 aa7.79□□□□□ -1.16
GPNMB-207ENST00000468723 DCDC2BA2VCK2 349 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 ATXN7O15265 892 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-207ENST00000468723 ATG7O95352 703 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 ALDH16A1Q8IZ83 802 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 PRIMPOLQ96LW4 560 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 ARID3AQ99856 593 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 CFHR5Q9BXR6 569 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 PHF24Q9UPV7 400 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 PCDHGC4Q9Y5F7 938 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 IGF1RP08069 1367 aa7.78□□□□□ -1.16
GPNMB-207ENST00000468723 KHNYNO15037 678 aaKnown RBP7.77□□□□□ -1.17
GPNMB-207ENST00000468723 IGFBP4P22692 258 aa7.77□□□□□ -1.17
GPNMB-207ENST00000468723 CTBSQ01459 385 aa7.77□□□□□ -1.17
GPNMB-207ENST00000468723 SRSF11Q05519 484 aaKnown RBP7.77□□□□□ -1.17
GPNMB-207ENST00000468723 ELOAQ14241 798 aaKnown RBP7.77□□□□□ -1.17
GPNMB-207ENST00000468723 FIGNL1Q6PIW4 674 aa7.77□□□□□ -1.17
GPNMB-207ENST00000468723 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms