RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 MCM10Q7L590 875 aa19.14■□□□□ 0.65
COL27A1-203ENST00000468565 NLGN1Q8N2Q7 840 aa19.14■□□□□ 0.65
COL27A1-203ENST00000468565 ZNF496Q96IT1 587 aaPredicted RBP19.14■□□□□ 0.65
COL27A1-203ENST00000468565 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-203ENST00000468565 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-203ENST00000468565 GYS1P13807 737 aa19.13■□□□□ 0.65
COL27A1-203ENST00000468565 NLGN2Q8NFZ4 835 aa19.13■□□□□ 0.65
COL27A1-203ENST00000468565 FMNL2Q96PY5 1086 aa19.13■□□□□ 0.65
COL27A1-203ENST00000468565 TEX13AQ9BXU3 409 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-203ENST00000468565 MAPK8IP3Q9UPT6 1336 aa19.13■□□□□ 0.65
COL27A1-203ENST00000468565 KDM3BQ7LBC6 1761 aa19.13■□□□□ 0.65
COL27A1-203ENST00000468565 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
COL27A1-203ENST00000468565 USP42Q9H9J4 1324 aaKnown RBP19.12■□□□□ 0.65
COL27A1-203ENST00000468565 STARD3NLO95772 234 aa19.12■□□□□ 0.65
COL27A1-203ENST00000468565 MMP10P09238 476 aa19.11■□□□□ 0.65
COL27A1-203ENST00000468565 DCTN1Q14203 1278 aa19.11■□□□□ 0.65
COL27A1-203ENST00000468565 ZBTB1Q9Y2K1 713 aa19.11■□□□□ 0.65
COL27A1-203ENST00000468565 COL15A1P39059 1388 aa19.1■□□□□ 0.65
COL27A1-203ENST00000468565 KCNQ3O43525 872 aa19.09■□□□□ 0.65
COL27A1-203ENST00000468565 KIAA1551Q9HCM1 1747 aa19.09■□□□□ 0.65
COL27A1-203ENST00000468565 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
COL27A1-203ENST00000468565 TAF7Q15545 349 aaPredicted RBP19.08■□□□□ 0.65
COL27A1-203ENST00000468565 SRP68Q9UHB9 627 aaKnown RBP19.08■□□□□ 0.65
COL27A1-203ENST00000468565 UTRNP46939 3433 aa19.08■□□□□ 0.64
COL27A1-203ENST00000468565 GPR162Q16538 588 aa19.08■□□□□ 0.64
COL27A1-203ENST00000468565 ZPR1O75312 459 aa19.07■□□□□ 0.64
COL27A1-203ENST00000468565 NARFQ9UHQ1 456 aa19.07■□□□□ 0.64
COL27A1-203ENST00000468565 SCN7AQ01118 1682 aa19.07■□□□□ 0.64
COL27A1-203ENST00000468565 PNISRQ8TF01 805 aaKnown RBP19.06■□□□□ 0.64
COL27A1-203ENST00000468565 FOXD4L1Q9NU39 408 aa19.06■□□□□ 0.64
COL27A1-203ENST00000468565 C10orf71Q711Q0 1435 aa19.06■□□□□ 0.64
COL27A1-203ENST00000468565 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
COL27A1-203ENST00000468565 EIF5P55010 431 aaKnown RBP19.06■□□□□ 0.64
COL27A1-203ENST00000468565 FKBP8Q14318 412 aa19.06■□□□□ 0.64
COL27A1-203ENST00000468565 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.644e-8■□□□□ 10.6
COL27A1-203ENST00000468565 PARP3Q9Y6F1 533 aa19.06■□□□□ 0.64
COL27A1-203ENST00000468565 AFDNP55196 1824 aaKnown RBP19.06■□□□□ 0.64
COL27A1-203ENST00000468565 N4BP2Q86UW6 1770 aaPredicted RBP19.05■□□□□ 0.64
COL27A1-203ENST00000468565 YY1P25490 414 aa19.05■□□□□ 0.64
COL27A1-203ENST00000468565 BRCA1P38398 1863 aaKnown RBP19.04■□□□□ 0.64
COL27A1-203ENST00000468565 A0A087WZG4 1122 aa19.04■□□□□ 0.64
COL27A1-203ENST00000468565 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
COL27A1-203ENST00000468565 IL6STP40189 918 aaPredicted RBP19.04■□□□□ 0.64
COL27A1-203ENST00000468565 USPL1Q5W0Q7 1092 aa19.04■□□□□ 0.64
COL27A1-203ENST00000468565 BCORQ6W2J9 1755 aa19.04■□□□□ 0.64
COL27A1-203ENST00000468565 NRXN2Q9P2S2 1712 aa19.04■□□□□ 0.64
COL27A1-203ENST00000468565 GOLGB1Q14789 3259 aaKnown RBP19.04■□□□□ 0.64
COL27A1-203ENST00000468565 ANP32CO43423 234 aa19.02■□□□□ 0.64
COL27A1-203ENST00000468565 TM4SF1P30408 202 aa19.02■□□□□ 0.64
COL27A1-203ENST00000468565 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
COL27A1-203ENST00000468565 RIPK4P57078 832 aa19.02■□□□□ 0.64
COL27A1-203ENST00000468565 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
COL27A1-203ENST00000468565 PXDNLA1KZ92 1463 aa19.02■□□□□ 0.64
COL27A1-203ENST00000468565 YBX3P16989 372 aaKnown RBP eCLIP19.02■□□□□ 0.63
COL27A1-203ENST00000468565 DDR1Q08345 913 aa19.02■□□□□ 0.63
COL27A1-203ENST00000468565 RUNDC1Q96C34 613 aa19.02■□□□□ 0.63
COL27A1-203ENST00000468565 USP16Q9Y5T5 823 aa19.02■□□□□ 0.63
COL27A1-203ENST00000468565 GRIN3BO60391 1043 aa19.01■□□□□ 0.63
COL27A1-203ENST00000468565 A1BGP04217 495 aa19.01■□□□□ 0.63
COL27A1-203ENST00000468565 TGFB2P61812 414 aa19.01■□□□□ 0.63
COL27A1-203ENST00000468565 THUMPD2Q9BTF0 503 aaKnown RBP19.01■□□□□ 0.63
COL27A1-203ENST00000468565 BCL2L12Q9HB09 334 aa19■□□□□ 0.63
COL27A1-203ENST00000468565 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
COL27A1-203ENST00000468565 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
COL27A1-203ENST00000468565 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
COL27A1-203ENST00000468565 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
COL27A1-203ENST00000468565 CCDC146Q8IYE0 955 aa19■□□□□ 0.63
COL27A1-203ENST00000468565 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
COL27A1-203ENST00000468565 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
COL27A1-203ENST00000468565 EIF4A1P60842 406 aaKnown RBP18.98■□□□□ 0.63
COL27A1-203ENST00000468565 NFIXQ14938 502 aa18.98■□□□□ 0.63
COL27A1-203ENST00000468565 BABAM1Q9NWV8 329 aa18.98■□□□□ 0.63
COL27A1-203ENST00000468565 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
COL27A1-203ENST00000468565 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-203ENST00000468565 ZNF330Q9Y3S2 320 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-203ENST00000468565 GIGYF1O75420 1035 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-203ENST00000468565 TBC1D2BQ9UPU7 963 aa18.96■□□□□ 0.63
COL27A1-203ENST00000468565 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
COL27A1-203ENST00000468565 DLEC1Q9Y238 1755 aa18.95■□□□□ 0.62
COL27A1-203ENST00000468565 CAMTA2O94983 1202 aa18.94■□□□□ 0.62
COL27A1-203ENST00000468565 TSPYL4Q9UJ04 414 aa18.94■□□□□ 0.62
COL27A1-203ENST00000468565 NBPF26B4DH59 902 aa18.94■□□□□ 0.62
COL27A1-203ENST00000468565 NEUROD2Q15784 382 aa18.94■□□□□ 0.62
COL27A1-203ENST00000468565 NBPF10Q6P3W6 841 aaKnown RBP18.94■□□□□ 0.62
COL27A1-203ENST00000468565 DZIP3Q86Y13 1208 aaKnown RBP18.94■□□□□ 0.62
COL27A1-203ENST00000468565 NBPF15Q8N660 670 aa18.94■□□□□ 0.62
COL27A1-203ENST00000468565 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
COL27A1-203ENST00000468565 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
COL27A1-203ENST00000468565 SERPINB2P05120 415 aa18.93■□□□□ 0.62
COL27A1-203ENST00000468565 DPEP1P16444 411 aa18.93■□□□□ 0.62
COL27A1-203ENST00000468565 PIP4K2AP48426 406 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-203ENST00000468565 ANKRD31Q8N7Z5 1873 aa18.93■□□□□ 0.62
COL27A1-203ENST00000468565 RGL2O15211 777 aa18.92■□□□□ 0.62
COL27A1-203ENST00000468565 TBC1D9BQ66K14 1250 aa18.92■□□□□ 0.62
COL27A1-203ENST00000468565 NUP98P52948 1817 aa18.92■□□□□ 0.62
COL27A1-203ENST00000468565 CARMIL3Q8ND23 1372 aa18.91■□□□□ 0.62
COL27A1-203ENST00000468565 WWC3Q9ULE0 1092 aa18.91■□□□□ 0.62
COL27A1-203ENST00000468565 KCNA3P22001 575 aa18.9■□□□□ 0.62
COL27A1-203ENST00000468565 CLEC4GQ6UXB4 293 aa18.9■□□□□ 0.62
COL27A1-203ENST00000468565 BICDL1Q6ZP65 573 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms