RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 CSB-PGBD3P0DP91 1061 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 IL2RBP14784 551 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 IL13P35225 146 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 MTHFSP49914 203 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 IFFO2Q5TF58 517 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 ILDR2Q71H61 639 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 SEPT12Q8IYM1 358 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 CFAP53Q96M91 514 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 PRKRIP1Q9H875 184 aaPredicted RBP4.74□□□□□ -1.65
TRIM59-202ENST00000468542 NLRP2Q9NX02 1062 aa4.74□□□□□ -1.65
TRIM59-202ENST00000468542 MYBBP1AQ9BQG0 1328 aaKnown RBP4.73□□□□□ -1.65
TRIM59-202ENST00000468542 TNS2Q63HR2 1409 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
TRIM59-202ENST00000468542 RGS20O76081 388 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 TNNT2P45379 298 aaPredicted RBP4.73□□□□□ -1.65
TRIM59-202ENST00000468542 EIF4A2Q14240 407 aaKnown RBP4.73□□□□□ -1.65
TRIM59-202ENST00000468542 NBPF6Q5VWK0 638 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 CCDC125Q86Z20 511 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 NBPF4Q96M43 638 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 VPS9D1Q9Y2B5 631 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 CCDC9Q9Y3X0 531 aaKnown RBP4.73□□□□□ -1.65
TRIM59-202ENST00000468542 TAF1LQ8IZX4 1826 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 DLG5Q8TDM6 1919 aa4.73□□□□□ -1.65
TRIM59-202ENST00000468542 OVOS2A0A0G2JMS6 1433 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 PAPPAQ13219 1627 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 NUP188Q5SRE5 1749 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 DOT1LQ8TEK3 1739 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 BTAF1O14981 1849 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 SRCAPQ6ZRS2 3230 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 ZBTB7CA1YPR0 619 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 DIAPH1O60610 1272 aaKnown RBP4.72□□□□□ -1.65
TRIM59-202ENST00000468542 FCHSD2O94868 740 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 FBLN1P23142 703 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 DDB1Q16531 1140 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 FAM98CQ17RN3 349 aaKnown RBP4.72□□□□□ -1.65
TRIM59-202ENST00000468542 AMOTQ4VCS5 1084 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 FAM196AQ6ZSG2 479 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 KRT27Q7Z3Y8 459 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 EYA1Q99502 592 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 BCL2L12Q9HB09 334 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 NUDCQ9Y266 331 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 UBR2Q8IWV8 1755 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 MEGF6O75095 1541 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 PCDH11XQ9BZA7 1347 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 PCDH11YQ9BZA8 1340 aa4.72□□□□□ -1.65
TRIM59-202ENST00000468542 EXOC5O00471 708 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 SOCS7O14512 581 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 ANP32CO43423 234 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 TATP17735 454 aaPredicted RBP4.71□□□□□ -1.66
TRIM59-202ENST00000468542 PDE3BQ13370 1112 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 Q6ZNB5 142 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 PNNQ9H307 717 aaKnown RBP4.71□□□□□ -1.66
TRIM59-202ENST00000468542 USP35Q9P2H5 1018 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 SPG7Q9UQ90 795 aa4.71□□□□□ -1.66
TRIM59-202ENST00000468542 MRC1P22897 1456 aa4.7□□□□□ -1.66
TRIM59-202ENST00000468542 COL5A3P25940 1745 aaPredicted RBP4.7□□□□□ -1.66
TRIM59-202ENST00000468542 HSP90AB1P08238 724 aaKnown RBP4.7□□□□□ -1.66
TRIM59-202ENST00000468542 HMGB2P26583 209 aaKnown RBP4.7□□□□□ -1.66
TRIM59-202ENST00000468542 PDE4AP27815 886 aa4.7□□□□□ -1.66
TRIM59-202ENST00000468542 FOSBP53539 338 aa4.7□□□□□ -1.66
TRIM59-202ENST00000468542 ZCRB1Q8TBF4 217 aaKnown RBP4.7□□□□□ -1.66
TRIM59-202ENST00000468542 LTV1Q96GA3 475 aaPredicted RBP4.7□□□□□ -1.66
TRIM59-202ENST00000468542 TUBGCP6Q96RT7 1819 aa4.69□□□□□ -1.66
TRIM59-202ENST00000468542 A0A0G2JS52 829 aa4.69□□□□□ -1.66
TRIM59-202ENST00000468542 MYT1Q01538 1121 aa4.69□□□□□ -1.66
TRIM59-202ENST00000468542 PLEKHO1Q53GL0 409 aaPredicted RBP4.69□□□□□ -1.66
TRIM59-202ENST00000468542 SULT6B1Q6IMI4 303 aa4.69□□□□□ -1.66
TRIM59-202ENST00000468542 MARCH10Q8NA82 808 aaPredicted RBP4.69□□□□□ -1.66
TRIM59-202ENST00000468542 KCTD12Q96CX2 325 aaKnown RBP4.69□□□□□ -1.66
TRIM59-202ENST00000468542 DCAF5Q96JK2 942 aa4.69□□□□□ -1.66
TRIM59-202ENST00000468542 ZBED2Q9BTP6 218 aa4.69□□□□□ -1.66
TRIM59-202ENST00000468542 CASZ1Q86V15 1759 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 C5P01031 1676 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 PLSCR1O15162 318 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 CYP27B1O15528 508 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
TRIM59-202ENST00000468542 GTPBP6O43824 516 aaPredicted RBP4.68□□□□□ -1.66
TRIM59-202ENST00000468542 NEFMP07197 916 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 U2AF1L5P0DN76 240 aaPredicted RBP4.68□□□□□ -1.66
TRIM59-202ENST00000468542 PHKG2P15735 406 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 U2AF1Q01081 240 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRIM59-202ENST00000468542 MFSD10Q14728 455 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 AKAP4Q5JQC9 854 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 PPP1R15BQ5SWA1 713 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 AEBP1Q8IUX7 1158 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 IFNL2Q8IZJ0 200 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 NGEFQ8N5V2 710 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 USHBP1Q8N6Y0 703 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 GAS2L2Q8NHY3 880 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 UPF1Q92900 1129 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRIM59-202ENST00000468542 KCNK17Q96T54 332 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 RSPH6AQ9H0K4 717 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 UBR3Q6ZT12 1888 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 KDM3BQ7LBC6 1761 aa4.68□□□□□ -1.66
TRIM59-202ENST00000468542 ERVV-2B6SEH9 535 aa4.67□□□□□ -1.66
TRIM59-202ENST00000468542 CCER2I3L3R5 266 aa4.67□□□□□ -1.66
TRIM59-202ENST00000468542 U2SURPO15042 1029 aaKnown RBP4.67□□□□□ -1.66
TRIM59-202ENST00000468542 PRKAR2BP31323 418 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms