RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PRKAR2BP31323 418 aa14.91□□□□□ -0.02
COL4A6-205ENST00000468338 LINC00116Q8NCU8 138 aa14.91□□□□□ -0.02
COL4A6-205ENST00000468338 UBR3Q6ZT12 1888 aa14.91□□□□□ -0.02
COL4A6-205ENST00000468338 U2AF1L5P0DN76 240 aaPredicted RBP14.9□□□□□ -0.02
COL4A6-205ENST00000468338 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
COL4A6-205ENST00000468338 U2AF1Q01081 240 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL4A6-205ENST00000468338 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
COL4A6-205ENST00000468338 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
COL4A6-205ENST00000468338 CICQ96RK0 1608 aaPredicted RBP14.89□□□□□ -0.03
COL4A6-205ENST00000468338 MAP3K5Q99683 1374 aa14.89□□□□□ -0.03
COL4A6-205ENST00000468338 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
COL4A6-205ENST00000468338 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
COL4A6-205ENST00000468338 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
COL4A6-205ENST00000468338 GNAT3A8MTJ3 354 aa14.88□□□□□ -0.03
COL4A6-205ENST00000468338 COL5A3P25940 1745 aaPredicted RBP14.88□□□□□ -0.03
COL4A6-205ENST00000468338 MYH14Q7Z406 1995 aaKnown RBP14.87□□□□□ -0.03
COL4A6-205ENST00000468338 RC3H1Q5TC82 1133 aaKnown RBP14.87□□□□□ -0.03
COL4A6-205ENST00000468338 SIPA1L3O60292 1781 aaPredicted RBP14.86□□□□□ -0.03
COL4A6-205ENST00000468338 SSFA2P28290 1259 aa14.86□□□□□ -0.03
COL4A6-205ENST00000468338 AK7Q96M32 723 aa14.86□□□□□ -0.03
COL4A6-205ENST00000468338 PLEKHF1Q96S99 279 aa14.86□□□□□ -0.03
COL4A6-205ENST00000468338 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
COL4A6-205ENST00000468338 CNTNAP4Q9C0A0 1308 aa14.86□□□□□ -0.03
COL4A6-205ENST00000468338 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
COL4A6-205ENST00000468338 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-205ENST00000468338 PPP1R1BQ9UD71 204 aaPredicted RBP14.85□□□□□ -0.03
COL4A6-205ENST00000468338 TJP1Q07157 1748 aa14.84□□□□□ -0.03
COL4A6-205ENST00000468338 KCPQ6ZWJ8 1503 aa14.84□□□□□ -0.03
COL4A6-205ENST00000468338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.84□□□□□ -0.03
COL4A6-205ENST00000468338 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
COL4A6-205ENST00000468338 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
COL4A6-205ENST00000468338 ARXQ96QS3 562 aa14.84□□□□□ -0.03
COL4A6-205ENST00000468338 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.03
COL4A6-205ENST00000468338 GNPATO15228 680 aa14.83□□□□□ -0.04
COL4A6-205ENST00000468338 HTATSF1O43719 755 aaKnown RBP14.83□□□□□ -0.04
COL4A6-205ENST00000468338 SMIM5Q71RC9 77 aa14.83□□□□□ -0.04
COL4A6-205ENST00000468338 RPS6KA4O75676 772 aa14.82□□□□□ -0.04
COL4A6-205ENST00000468338 SYT17Q9BSW7 474 aa14.82□□□□□ -0.04
COL4A6-205ENST00000468338 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
COL4A6-205ENST00000468338 POLD1P28340 1107 aa14.81□□□□□ -0.04
COL4A6-205ENST00000468338 TEFQ10587 303 aa14.81□□□□□ -0.04
COL4A6-205ENST00000468338 ZNF467Q7Z7K2 595 aaPredicted RBP14.81□□□□□ -0.04
COL4A6-205ENST00000468338 FHDC1Q9C0D6 1143 aaPredicted RBP14.81□□□□□ -0.04
COL4A6-205ENST00000468338 RTCBQ9Y3I0 505 aaKnown RBP14.81□□□□□ -0.04
COL4A6-205ENST00000468338 DLG5Q8TDM6 1919 aa14.8□□□□□ -0.04
COL4A6-205ENST00000468338 CRKLP46109 303 aaKnown RBP14.8□□□□□ -0.04
COL4A6-205ENST00000468338 TRAPPC3LQ5T215 181 aa14.8□□□□□ -0.04
COL4A6-205ENST00000468338 INTS5Q6P9B9 1019 aaKnown RBP14.8□□□□□ -0.04
COL4A6-205ENST00000468338 ZNF790Q6PG37 636 aa14.8□□□□□ -0.04
COL4A6-205ENST00000468338 DNAJC10Q8IXB1 793 aa14.8□□□□□ -0.04
COL4A6-205ENST00000468338 PNNQ9H307 717 aaKnown RBP14.8□□□□□ -0.04
COL4A6-205ENST00000468338 PHF14O94880 888 aa14.79□□□□□ -0.04
COL4A6-205ENST00000468338 CYP19A1P11511 503 aaPredicted RBP14.79□□□□□ -0.04
COL4A6-205ENST00000468338 ARHGEF1Q92888 912 aaKnown RBP14.79□□□□□ -0.04
COL4A6-205ENST00000468338 NFE2L2Q16236 605 aa14.78□□□□□ -0.04
COL4A6-205ENST00000468338 MCM10Q7L590 875 aa14.78□□□□□ -0.04
COL4A6-205ENST00000468338 RTF1Q92541 710 aaKnown RBP14.78□□□□□ -0.04
COL4A6-205ENST00000468338 ZNF496Q96IT1 587 aaPredicted RBP14.78□□□□□ -0.04
COL4A6-205ENST00000468338 HEG1Q9ULI3 1381 aa14.77□□□□□ -0.04
COL4A6-205ENST00000468338 NEFMP07197 916 aa14.77□□□□□ -0.05
COL4A6-205ENST00000468338 DCTN1Q14203 1278 aa14.77□□□□□ -0.05
COL4A6-205ENST00000468338 MSL1Q68DK7 614 aa14.77□□□□□ -0.05
COL4A6-205ENST00000468338 TTC5Q8N0Z6 440 aa14.77□□□□□ -0.05
COL4A6-205ENST00000468338 C4AP0C0L4 1744 aa14.76□□□□□ -0.05
COL4A6-205ENST00000468338 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
COL4A6-205ENST00000468338 KCNQ3O43525 872 aa14.76□□□□□ -0.05
COL4A6-205ENST00000468338 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
COL4A6-205ENST00000468338 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
COL4A6-205ENST00000468338 SOS1Q07889 1333 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-205ENST00000468338 TAF7Q15545 349 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-205ENST00000468338 FMNL2Q96PY5 1086 aa14.75□□□□□ -0.05
COL4A6-205ENST00000468338 TEX13AQ9BXU3 409 aaPredicted RBP14.75□□□□□ -0.05
COL4A6-205ENST00000468338 WDR70Q9NW82 654 aa14.75□□□□□ -0.05
COL4A6-205ENST00000468338 MAPK8IP3Q9UPT6 1336 aa14.74□□□□□ -0.05
COL4A6-205ENST00000468338 GYS1P13807 737 aa14.74□□□□□ -0.05
COL4A6-205ENST00000468338 NLGN1Q8N2Q7 840 aa14.74□□□□□ -0.05
COL4A6-205ENST00000468338 ZBTB1Q9Y2K1 713 aa14.74□□□□□ -0.05
COL4A6-205ENST00000468338 STARD3NLO95772 234 aa14.73□□□□□ -0.05
COL4A6-205ENST00000468338 RFC4P35249 363 aa14.73□□□□□ -0.05
COL4A6-205ENST00000468338 TMPOP42166 694 aaKnown RBP14.73□□□□□ -0.05
COL4A6-205ENST00000468338 ADAMTS8Q9UP79 889 aa14.73□□□□□ -0.05
COL4A6-205ENST00000468338 CD2APQ9Y5K6 639 aa14.73□□□□□ -0.05
COL4A6-205ENST00000468338 USP42Q9H9J4 1324 aaKnown RBP14.72□□□□□ -0.05
COL4A6-205ENST00000468338 EIF5P55010 431 aaKnown RBP14.72□□□□□ -0.05
COL4A6-205ENST00000468338 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
COL4A6-205ENST00000468338 RUNDC1Q96C34 613 aa14.71□□□□□ -0.05
COL4A6-205ENST00000468338 KDM3BQ7LBC6 1761 aa14.7□□□□□ -0.06
COL4A6-205ENST00000468338 MMP10P09238 476 aa14.7□□□□□ -0.06
COL4A6-205ENST00000468338 SNRPA1P09661 255 aaKnown RBP14.7□□□□□ -0.06
COL4A6-205ENST00000468338 RIPK4P57078 832 aa14.7□□□□□ -0.06
COL4A6-205ENST00000468338 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL4A6-205ENST00000468338 NLGN2Q8NFZ4 835 aa14.7□□□□□ -0.06
COL4A6-205ENST00000468338 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
COL4A6-205ENST00000468338 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
COL4A6-205ENST00000468338 SRP68Q9UHB9 627 aaKnown RBP14.7□□□□□ -0.06
COL4A6-205ENST00000468338 NARFQ9UHQ1 456 aa14.7□□□□□ -0.06
COL4A6-205ENST00000468338 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
COL4A6-205ENST00000468338 IL6STP40189 918 aaPredicted RBP14.69□□□□□ -0.06
COL4A6-205ENST00000468338 MIS18AQ9NYP9 233 aa14.69□□□□□ -0.06
COL4A6-205ENST00000468338 COL15A1P39059 1388 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms