RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 MMP10P09238 476 aa19.31■□□□□ 0.68
COMMD3-206ENST00000468179 GYS1P13807 737 aa19.31■□□□□ 0.68
COMMD3-206ENST00000468179 NFE2L2Q16236 605 aa19.31■□□□□ 0.68
COMMD3-206ENST00000468179 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
COMMD3-206ENST00000468179 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
COMMD3-206ENST00000468179 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
COMMD3-206ENST00000468179 PARP3Q9Y6F1 533 aa19.3■□□□□ 0.68
COMMD3-206ENST00000468179 A0A087WZG4 1122 aa19.29■□□□□ 0.68
COMMD3-206ENST00000468179 YY1P25490 414 aa19.29■□□□□ 0.68
COMMD3-206ENST00000468179 WDR43Q15061 677 aaKnown RBP eCLIP19.29■□□□□ 0.68
COMMD3-206ENST00000468179 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
COMMD3-206ENST00000468179 NLGN2Q8NFZ4 835 aa19.29■□□□□ 0.68
COMMD3-206ENST00000468179 PRKRIP1Q9H875 184 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-206ENST00000468179 SOS1Q07889 1333 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-206ENST00000468179 USP42Q9H9J4 1324 aaKnown RBP19.29■□□□□ 0.68
COMMD3-206ENST00000468179 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
COMMD3-206ENST00000468179 TJP1Q07157 1748 aa19.28■□□□□ 0.68
COMMD3-206ENST00000468179 GRIN3BO60391 1043 aa19.27■□□□□ 0.68
COMMD3-206ENST00000468179 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
COMMD3-206ENST00000468179 ZBTB1Q9Y2K1 713 aa19.27■□□□□ 0.68
COMMD3-206ENST00000468179 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.67
COMMD3-206ENST00000468179 SNRPA1P09661 255 aaKnown RBP19.26■□□□□ 0.67
COMMD3-206ENST00000468179 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
COMMD3-206ENST00000468179 LMOD3Q0VAK6 560 aa19.26■□□□□ 0.67
COMMD3-206ENST00000468179 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
COMMD3-206ENST00000468179 DSG3P32926 999 aa19.25■□□□□ 0.67
COMMD3-206ENST00000468179 SRP68Q9UHB9 627 aaKnown RBP19.25■□□□□ 0.67
COMMD3-206ENST00000468179 NARFQ9UHQ1 456 aa19.25■□□□□ 0.67
COMMD3-206ENST00000468179 COL15A1P39059 1388 aa19.25■□□□□ 0.67
COMMD3-206ENST00000468179 MYH14Q7Z406 1995 aaKnown RBP19.25■□□□□ 0.67
COMMD3-206ENST00000468179 UBR2Q8IWV8 1755 aa19.24■□□□□ 0.67
COMMD3-206ENST00000468179 KCNQ3O43525 872 aa19.24■□□□□ 0.67
COMMD3-206ENST00000468179 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
COMMD3-206ENST00000468179 EIF5P55010 431 aaKnown RBP19.24■□□□□ 0.67
COMMD3-206ENST00000468179 TGFB2P61812 414 aa19.24■□□□□ 0.67
COMMD3-206ENST00000468179 FKBP8Q14318 412 aa19.24■□□□□ 0.67
COMMD3-206ENST00000468179 USPL1Q5W0Q7 1092 aa19.24■□□□□ 0.67
COMMD3-206ENST00000468179 SIPA1L3O60292 1781 aaPredicted RBP19.23■□□□□ 0.67
COMMD3-206ENST00000468179 RIPK4P57078 832 aa19.23■□□□□ 0.67
COMMD3-206ENST00000468179 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
COMMD3-206ENST00000468179 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
COMMD3-206ENST00000468179 A1BGP04217 495 aa19.2■□□□□ 0.66
COMMD3-206ENST00000468179 TM4SF1P30408 202 aa19.2■□□□□ 0.66
COMMD3-206ENST00000468179 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
COMMD3-206ENST00000468179 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
COMMD3-206ENST00000468179 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
COMMD3-206ENST00000468179 USP16Q9Y5T5 823 aa19.2■□□□□ 0.66
COMMD3-206ENST00000468179 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
COMMD3-206ENST00000468179 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
COMMD3-206ENST00000468179 YBX3P16989 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
COMMD3-206ENST00000468179 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
COMMD3-206ENST00000468179 ADAMTS8Q9UP79 889 aa19.18■□□□□ 0.66
COMMD3-206ENST00000468179 C10orf71Q711Q0 1435 aa19.17■□□□□ 0.66
COMMD3-206ENST00000468179 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
COMMD3-206ENST00000468179 CCDC146Q8IYE0 955 aa19.17■□□□□ 0.66
COMMD3-206ENST00000468179 THUMPD2Q9BTF0 503 aaKnown RBP19.17■□□□□ 0.66
COMMD3-206ENST00000468179 DDR1Q08345 913 aa19.16■□□□□ 0.66
COMMD3-206ENST00000468179 NFIXQ14938 502 aa19.16■□□□□ 0.66
COMMD3-206ENST00000468179 TSPYL4Q9UJ04 414 aa19.16■□□□□ 0.66
COMMD3-206ENST00000468179 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
COMMD3-206ENST00000468179 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
COMMD3-206ENST00000468179 DZIP3Q86Y13 1208 aaKnown RBP19.15■□□□□ 0.66
COMMD3-206ENST00000468179 BCL2L12Q9HB09 334 aa19.15■□□□□ 0.66
COMMD3-206ENST00000468179 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
COMMD3-206ENST00000468179 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
COMMD3-206ENST00000468179 ANP32CO43423 234 aa19.14■□□□□ 0.65
COMMD3-206ENST00000468179 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.65
COMMD3-206ENST00000468179 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
COMMD3-206ENST00000468179 A0A0G2JLW4 131 aa19.13■□□□□ 0.65
COMMD3-206ENST00000468179 MYCNP04198 464 aaPredicted RBP19.13■□□□□ 0.65
COMMD3-206ENST00000468179 SERPINB2P05120 415 aa19.13■□□□□ 0.65
COMMD3-206ENST00000468179 RRP7AQ9Y3A4 280 aaKnown RBP19.13■□□□□ 0.65
COMMD3-206ENST00000468179 PXDNLA1KZ92 1463 aa19.12■□□□□ 0.65
COMMD3-206ENST00000468179 RGL2O15211 777 aa19.12■□□□□ 0.65
COMMD3-206ENST00000468179 DPEP1P16444 411 aa19.12■□□□□ 0.65
COMMD3-206ENST00000468179 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
COMMD3-206ENST00000468179 SETDB2Q96T68 719 aa19.12■□□□□ 0.65
COMMD3-206ENST00000468179 PIM2Q9P1W9 311 aa19.12■□□□□ 0.65
COMMD3-206ENST00000468179 DLG5Q8TDM6 1919 aa19.11■□□□□ 0.65
COMMD3-206ENST00000468179 CAMTA2O94983 1202 aa19.11■□□□□ 0.65
COMMD3-206ENST00000468179 BICDL1Q6ZP65 573 aa19.11■□□□□ 0.65
COMMD3-206ENST00000468179 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
COMMD3-206ENST00000468179 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
COMMD3-206ENST00000468179 BCS1LQ9Y276 419 aa19.1■□□□□ 0.65
COMMD3-206ENST00000468179 CARMIL3Q8ND23 1372 aa19.09■□□□□ 0.65
COMMD3-206ENST00000468179 ERBB4Q15303 1308 aa19.09■□□□□ 0.65
COMMD3-206ENST00000468179 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
COMMD3-206ENST00000468179 NPHP1O15259 732 aa19.09■□□□□ 0.65
COMMD3-206ENST00000468179 PIP4K2AP48426 406 aaPredicted RBP19.09■□□□□ 0.65
COMMD3-206ENST00000468179 CALD1Q05682 793 aaKnown RBP19.09■□□□□ 0.65
COMMD3-206ENST00000468179 WWC3Q9ULE0 1092 aa19.09■□□□□ 0.65
COMMD3-206ENST00000468179 NBPF26B4DH59 902 aa19.08■□□□□ 0.65
COMMD3-206ENST00000468179 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.65
COMMD3-206ENST00000468179 NBPF15Q8N660 670 aa19.08■□□□□ 0.65
COMMD3-206ENST00000468179 DALRD3Q5D0E6 543 aaKnown RBP19.07■□□□□ 0.64
COMMD3-206ENST00000468179 ZNF784Q8NCA9 323 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-206ENST00000468179 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
COMMD3-206ENST00000468179 CHD4Q14839 1912 aa19.07■□□□□ 0.64
COMMD3-206ENST00000468179 KDM3BQ7LBC6 1761 aa19.06■□□□□ 0.64
COMMD3-206ENST00000468179 CHL1O00533 1208 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms