RNA–Protein interactions for RNA: ENST00000468102.1

DEF6-203, Transcript of DEF6, guanine nucleotide exchange factor, humanhuman

TSL 2

Gene DEF6, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF6-203ENST00000468102 USP42Q9H9J4 1324 aaKnown RBP23.32■■□□□ 1.32
DEF6-203ENST00000468102 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
DEF6-203ENST00000468102 SOS1Q07889 1333 aaPredicted RBP23.31■■□□□ 1.32
DEF6-203ENST00000468102 TAF7Q15545 349 aaPredicted RBP23.3■■□□□ 1.32
DEF6-203ENST00000468102 USPL1Q5W0Q7 1092 aa23.3■■□□□ 1.32
DEF6-203ENST00000468102 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
DEF6-203ENST00000468102 GRIN3BO60391 1043 aa23.29■■□□□ 1.32
DEF6-203ENST00000468102 FKBP8Q14318 412 aa23.29■■□□□ 1.32
DEF6-203ENST00000468102 COL15A1P39059 1388 aa23.28■■□□□ 1.32
DEF6-203ENST00000468102 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
DEF6-203ENST00000468102 A0A087WZG4 1122 aa23.27■■□□□ 1.32
DEF6-203ENST00000468102 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
DEF6-203ENST00000468102 UBR2Q8IWV8 1755 aa23.27■■□□□ 1.32
DEF6-203ENST00000468102 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
DEF6-203ENST00000468102 C4AP0C0L4 1744 aa23.26■■□□□ 1.31
DEF6-203ENST00000468102 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
DEF6-203ENST00000468102 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
DEF6-203ENST00000468102 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
DEF6-203ENST00000468102 A1BGP04217 495 aa23.25■■□□□ 1.31
DEF6-203ENST00000468102 SNRPA1P09661 255 aaKnown RBP23.25■■□□□ 1.31
DEF6-203ENST00000468102 RIPK4P57078 832 aa23.25■■□□□ 1.31
DEF6-203ENST00000468102 CCDC146Q8IYE0 955 aa23.25■■□□□ 1.31
DEF6-203ENST00000468102 PNISRQ8TF01 805 aaKnown RBP23.25■■□□□ 1.31
DEF6-203ENST00000468102 THUMPD2Q9BTF0 503 aaKnown RBP23.25■■□□□ 1.31
DEF6-203ENST00000468102 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
DEF6-203ENST00000468102 A0A0G2JLW4 131 aa23.23■■□□□ 1.31
DEF6-203ENST00000468102 TGFB2P61812 414 aa23.23■■□□□ 1.31
DEF6-203ENST00000468102 BICDL1Q6ZP65 573 aa23.23■■□□□ 1.31
DEF6-203ENST00000468102 USP16Q9Y5T5 823 aa23.23■■□□□ 1.31
DEF6-203ENST00000468102 EIF5P55010 431 aaKnown RBP23.22■■□□□ 1.31
DEF6-203ENST00000468102 TBC1D2BQ9UPU7 963 aa23.22■■□□□ 1.31
DEF6-203ENST00000468102 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
DEF6-203ENST00000468102 ZNF316A6NFI3 1004 aaPredicted RBP23.21■■□□□ 1.31
DEF6-203ENST00000468102 IL6STP40189 918 aaPredicted RBP23.21■■□□□ 1.31
DEF6-203ENST00000468102 DDR1Q08345 913 aa23.21■■□□□ 1.31
DEF6-203ENST00000468102 RRP7AQ9Y3A4 280 aaKnown RBP23.21■■□□□ 1.31
DEF6-203ENST00000468102 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
DEF6-203ENST00000468102 PIP4K2AP48426 406 aaPredicted RBP23.2■■□□□ 1.3
DEF6-203ENST00000468102 LMOD3Q0VAK6 560 aa23.2■■□□□ 1.3
DEF6-203ENST00000468102 CHD4Q14839 1912 aa23.2■■□□□ 1.3
DEF6-203ENST00000468102 TM4SF1P30408 202 aa23.19■■□□□ 1.3
DEF6-203ENST00000468102 TMPOP42166 694 aaKnown RBP23.19■■□□□ 1.3
DEF6-203ENST00000468102 NFIXQ14938 502 aa23.19■■□□□ 1.3
DEF6-203ENST00000468102 BCS1LQ9Y276 419 aa23.19■■□□□ 1.3
DEF6-203ENST00000468102 POLRMTO00411 1230 aaKnown RBP23.18■■□□□ 1.3
DEF6-203ENST00000468102 NPHP1O15259 732 aa23.18■■□□□ 1.3
DEF6-203ENST00000468102 DPEP1P16444 411 aa23.18■■□□□ 1.3
DEF6-203ENST00000468102 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
DEF6-203ENST00000468102 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
DEF6-203ENST00000468102 TSPYL4Q9UJ04 414 aa23.17■■□□□ 1.3
DEF6-203ENST00000468102 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
DEF6-203ENST00000468102 SERPINB2P05120 415 aa23.16■■□□□ 1.3
DEF6-203ENST00000468102 DZIP3Q86Y13 1208 aaKnown RBP23.16■■□□□ 1.3
DEF6-203ENST00000468102 BCL2L12Q9HB09 334 aa23.15■■□□□ 1.3
DEF6-203ENST00000468102 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
DEF6-203ENST00000468102 PXDNLA1KZ92 1463 aa23.14■■□□□ 1.29
DEF6-203ENST00000468102 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
DEF6-203ENST00000468102 ZNF784Q8NCA9 323 aaPredicted RBP23.14■■□□□ 1.29
DEF6-203ENST00000468102 TBC1D9BQ66K14 1250 aa23.13■■□□□ 1.29
DEF6-203ENST00000468102 PIM2Q9P1W9 311 aa23.13■■□□□ 1.29
DEF6-203ENST00000468102 N4BP2Q86UW6 1770 aaPredicted RBP23.13■■□□□ 1.29
DEF6-203ENST00000468102 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
DEF6-203ENST00000468102 SETDB2Q96T68 719 aa23.12■■□□□ 1.29
DEF6-203ENST00000468102 GIGYF1O75420 1035 aaPredicted RBP23.11■■□□□ 1.29
DEF6-203ENST00000468102 CHRNA5P30532 468 aa23.11■■□□□ 1.29
DEF6-203ENST00000468102 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
DEF6-203ENST00000468102 UTRNP46939 3433 aa23.1■■□□□ 1.29
DEF6-203ENST00000468102 ANP32CO43423 234 aa23.1■■□□□ 1.29
DEF6-203ENST00000468102 CAMTA2O94983 1202 aa23.1■■□□□ 1.29
DEF6-203ENST00000468102 ARHGAP27Q6ZUM4 889 aa23.1■■□□□ 1.29
DEF6-203ENST00000468102 KIF13BQ9NQT8 1826 aa23.1■■□□□ 1.29
DEF6-203ENST00000468102 DALRD3Q5D0E6 543 aaKnown RBP23.09■■□□□ 1.29
DEF6-203ENST00000468102 NBPF26B4DH59 902 aa23.08■■□□□ 1.29
DEF6-203ENST00000468102 MYL6BP14649 208 aa23.08■■□□□ 1.29
DEF6-203ENST00000468102 NBPF10Q6P3W6 841 aaKnown RBP23.08■■□□□ 1.29
DEF6-203ENST00000468102 NBPF15Q8N660 670 aa23.08■■□□□ 1.29
DEF6-203ENST00000468102 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
DEF6-203ENST00000468102 CARMIL3Q8ND23 1372 aa23.06■■□□□ 1.28
DEF6-203ENST00000468102 H0YIN7 160 aa23.06■■□□□ 1.28
DEF6-203ENST00000468102 KCNA3P22001 575 aa23.06■■□□□ 1.28
DEF6-203ENST00000468102 C2CD5Q86YS7 1000 aa23.06■■□□□ 1.28
DEF6-203ENST00000468102 CCDC24Q8N4L8 307 aa23.06■■□□□ 1.28
DEF6-203ENST00000468102 GOLGB1Q14789 3259 aaKnown RBP23.06■■□□□ 1.28
DEF6-203ENST00000468102 KDM3BQ7LBC6 1761 aa23.05■■□□□ 1.28
DEF6-203ENST00000468102 KIF6Q6ZMV9 814 aa23.05■■□□□ 1.28
DEF6-203ENST00000468102 CNBD1Q8NA66 436 aa23.05■■□□□ 1.28
DEF6-203ENST00000468102 BABAM1Q9NWV8 329 aa23.05■■□□□ 1.28
DEF6-203ENST00000468102 APAF1O14727 1248 aa23.04■■□□□ 1.28
DEF6-203ENST00000468102 ST5P78524 1137 aa23.04■■□□□ 1.28
DEF6-203ENST00000468102 CLEC4GQ6UXB4 293 aa23.04■■□□□ 1.28
DEF6-203ENST00000468102 TRIM35Q9UPQ4 493 aa23.04■■□□□ 1.28
DEF6-203ENST00000468102 AFDNP55196 1824 aaKnown RBP23.03■■□□□ 1.28
DEF6-203ENST00000468102 FAM177BA6PVY3 158 aa23.03■■□□□ 1.28
DEF6-203ENST00000468102 PDE6BP35913 854 aa23.03■■□□□ 1.28
DEF6-203ENST00000468102 NBPF5PQ86XG9 351 aaPredicted RBP23.03■■□□□ 1.28
DEF6-203ENST00000468102 NECTIN2Q92692 538 aa23.03■■□□□ 1.28
DEF6-203ENST00000468102 ZNF622Q969S3 477 aaKnown RBP eCLIP23.03■■□□□ 1.28
DEF6-203ENST00000468102 NIP7Q9Y221 180 aaKnown RBP eCLIP23.03■■□□□ 1.28
DEF6-203ENST00000468102 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
DEF6-203ENST00000468102 PRR5LQ6MZQ0 368 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms