RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
VARS2-204ENST00000467717 CNTNAP4Q9C0A0 1308 aa22.03■■□□□ 1.12
VARS2-204ENST00000467717 VAMP4O75379 141 aa22.02■■□□□ 1.12
VARS2-204ENST00000467717 CRKLP46109 303 aaKnown RBP22.02■■□□□ 1.12
VARS2-204ENST00000467717 RC3H1Q5TC82 1133 aaKnown RBP22.02■■□□□ 1.12
VARS2-204ENST00000467717 HDGFL1Q5TGJ6 251 aa22.02■■□□□ 1.12
VARS2-204ENST00000467717 LY75O60449 1722 aa22.02■■□□□ 1.12
VARS2-204ENST00000467717 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
VARS2-204ENST00000467717 CCDC87Q9NVE4 849 aa22.01■■□□□ 1.11
VARS2-204ENST00000467717 A1BGP04217 495 aa22■■□□□ 1.11
VARS2-204ENST00000467717 INTS5Q6P9B9 1019 aaKnown RBP22■■□□□ 1.11
VARS2-204ENST00000467717 AK7Q96M32 723 aa22■■□□□ 1.11
VARS2-204ENST00000467717 ZNF831Q5JPB2 1677 aa21.99■■□□□ 1.11
VARS2-204ENST00000467717 NBPF14Q5TI25 921 aa21.99■■□□□ 1.11
VARS2-204ENST00000467717 AKT1S1Q96B36 256 aa21.99■■□□□ 1.11
VARS2-204ENST00000467717 ZBTB1Q9Y2K1 713 aa21.99■■□□□ 1.11
VARS2-204ENST00000467717 ERBB4Q15303 1308 aa21.99■■□□□ 1.11
VARS2-204ENST00000467717 CCDC30Q5VVM6 783 aa21.98■■□□□ 1.11
VARS2-204ENST00000467717 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
VARS2-204ENST00000467717 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
VARS2-204ENST00000467717 STK32BQ9NY57 414 aa21.98■■□□□ 1.11
VARS2-204ENST00000467717 GNPATO15228 680 aa21.97■■□□□ 1.11
VARS2-204ENST00000467717 CANXP27824 592 aaKnown RBP21.97■■□□□ 1.11
VARS2-204ENST00000467717 ZNF827Q17R98 1081 aa21.97■■□□□ 1.11
VARS2-204ENST00000467717 ANO8Q9HCE9 1232 aaPredicted RBP21.97■■□□□ 1.11
VARS2-204ENST00000467717 CICQ96RK0 1608 aaPredicted RBP21.97■■□□□ 1.11
VARS2-204ENST00000467717 NBPF26B4DH59 902 aa21.96■■□□□ 1.11
VARS2-204ENST00000467717 RPS6KA4O75676 772 aa21.96■■□□□ 1.11
VARS2-204ENST00000467717 SLC15A2Q16348 729 aa21.96■■□□□ 1.11
VARS2-204ENST00000467717 NBPF10Q6P3W6 841 aaKnown RBP21.96■■□□□ 1.11
VARS2-204ENST00000467717 NBPF15Q8N660 670 aa21.96■■□□□ 1.11
VARS2-204ENST00000467717 DBF4Q9UBU7 674 aaPredicted RBP21.96■■□□□ 1.11
VARS2-204ENST00000467717 RTCBQ9Y3I0 505 aaKnown RBP21.96■■□□□ 1.11
VARS2-204ENST00000467717 TJP1Q07157 1748 aa21.95■■□□□ 1.1
VARS2-204ENST00000467717 IL6STP40189 918 aaPredicted RBP21.95■■□□□ 1.1
VARS2-204ENST00000467717 PDIA6Q15084 440 aa21.95■■□□□ 1.1
VARS2-204ENST00000467717 DDX21Q9NR30 783 aaKnown RBP eCLIP21.95■■□□□ 1.1
VARS2-204ENST00000467717 TFCP2L1Q9NZI6 479 aa21.95■■□□□ 1.1
VARS2-204ENST00000467717 CHPF2Q9P2E5 772 aa21.95■■□□□ 1.1
VARS2-204ENST00000467717 PIP4K2AP48426 406 aaPredicted RBP21.94■■□□□ 1.1
VARS2-204ENST00000467717 STK31Q9BXU1 1019 aa21.94■■□□□ 1.1
VARS2-204ENST00000467717 C5P01031 1676 aa21.94■■□□□ 1.1
VARS2-204ENST00000467717 EIF5P55010 431 aaKnown RBP21.93■■□□□ 1.1
VARS2-204ENST00000467717 NPM2Q86SE8 214 aaKnown RBP21.93■■□□□ 1.1
VARS2-204ENST00000467717 RREB1Q92766 1687 aa21.92■■□□□ 1.1
VARS2-204ENST00000467717 MYL6BP14649 208 aa21.92■■□□□ 1.1
VARS2-204ENST00000467717 SSFA2P28290 1259 aa21.92■■□□□ 1.1
VARS2-204ENST00000467717 PROSER3Q2NL68 480 aa21.92■■□□□ 1.1
VARS2-204ENST00000467717 HYPKQ9NX55 129 aa21.92■■□□□ 1.1
VARS2-204ENST00000467717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.91■■□□□ 1.1
VARS2-204ENST00000467717 TCERG1O14776 1098 aaKnown RBP21.91■■□□□ 1.1
VARS2-204ENST00000467717 ANXA1P04083 346 aa21.91■■□□□ 1.1
VARS2-204ENST00000467717 ADRA2BP18089 450 aa21.91■■□□□ 1.1
VARS2-204ENST00000467717 ALDH1L2Q3SY69 923 aa21.91■■□□□ 1.1
VARS2-204ENST00000467717 TRAPPC3LQ5T215 181 aa21.91■■□□□ 1.1
VARS2-204ENST00000467717 FLAD1Q8NFF5 587 aa21.91■■□□□ 1.1
VARS2-204ENST00000467717 ZNF330Q9Y3S2 320 aaPredicted RBP21.91■■□□□ 1.1
VARS2-204ENST00000467717 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
VARS2-204ENST00000467717 A0A087WZG4 1122 aa21.9■■□□□ 1.1
VARS2-204ENST00000467717 PHF14O94880 888 aa21.9■■□□□ 1.1
VARS2-204ENST00000467717 SLC4A2P04920 1241 aa21.9■■□□□ 1.1
VARS2-204ENST00000467717 LRP10Q7Z4F1 713 aa21.9■■□□□ 1.1
VARS2-204ENST00000467717 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
VARS2-204ENST00000467717 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.1
VARS2-204ENST00000467717 RARSP54136 660 aaKnown RBP21.89■■□□□ 1.09
VARS2-204ENST00000467717 SSH1Q8WYL5 1049 aa21.89■■□□□ 1.09
VARS2-204ENST00000467717 COL5A3P25940 1745 aaPredicted RBP21.89■■□□□ 1.09
VARS2-204ENST00000467717 SMIM5Q71RC9 77 aa21.88■■□□□ 1.09
VARS2-204ENST00000467717 ARHGEF1Q92888 912 aaKnown RBP21.88■■□□□ 1.09
VARS2-204ENST00000467717 COL15A1P39059 1388 aa21.87■■□□□ 1.09
VARS2-204ENST00000467717 PNPLA7Q6ZV29 1317 aa21.87■■□□□ 1.09
VARS2-204ENST00000467717 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
VARS2-204ENST00000467717 LAMB4A4D0S4 1761 aa21.87■■□□□ 1.09
VARS2-204ENST00000467717 RFC4P35249 363 aa21.86■■□□□ 1.09
VARS2-204ENST00000467717 COPS6Q7L5N1 327 aa21.86■■□□□ 1.09
VARS2-204ENST00000467717 COL23A1Q86Y22 540 aaPredicted RBP21.86■■□□□ 1.09
VARS2-204ENST00000467717 MRPL50Q8N5N7 158 aaKnown RBP21.86■■□□□ 1.09
VARS2-204ENST00000467717 XAGE3Q8WTP9 111 aa21.86■■□□□ 1.09
VARS2-204ENST00000467717 ARXQ96QS3 562 aa21.86■■□□□ 1.09
VARS2-204ENST00000467717 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
VARS2-204ENST00000467717 DZIP3Q86Y13 1208 aaKnown RBP21.85■■□□□ 1.09
VARS2-204ENST00000467717 BCL2L13Q9BXK5 485 aa21.85■■□□□ 1.09
VARS2-204ENST00000467717 PHAXQ9H814 394 aaKnown RBP21.85■■□□□ 1.09
VARS2-204ENST00000467717 AIMP1Q12904 312 aaKnown RBP21.84■■□□□ 1.09
VARS2-204ENST00000467717 KIF6Q6ZMV9 814 aa21.84■■□□□ 1.09
VARS2-204ENST00000467717 TTLL7Q6ZT98 887 aa21.84■■□□□ 1.09
VARS2-204ENST00000467717 TBC1D2BQ9UPU7 963 aa21.84■■□□□ 1.09
VARS2-204ENST00000467717 MYH14Q7Z406 1995 aaKnown RBP21.84■■□□□ 1.09
VARS2-204ENST00000467717 MSH5O43196 834 aa21.83■■□□□ 1.09
VARS2-204ENST00000467717 BRPF1P55201 1214 aaPredicted RBP21.83■■□□□ 1.09
VARS2-204ENST00000467717 FLIIQ13045 1269 aa21.83■■□□□ 1.09
VARS2-204ENST00000467717 G2E3Q7L622 706 aa21.83■■□□□ 1.09
VARS2-204ENST00000467717 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
VARS2-204ENST00000467717 RCAN3Q9UKA8 241 aa21.83■■□□□ 1.09
VARS2-204ENST00000467717 ZPR1O75312 459 aa21.82■■□□□ 1.08
VARS2-204ENST00000467717 DDX58O95786 925 aaKnown RBP21.81■■□□□ 1.08
VARS2-204ENST00000467717 USP42Q9H9J4 1324 aaKnown RBP21.8■■□□□ 1.08
VARS2-204ENST00000467717 DCAF8L1A6NGE4 600 aa21.8■■□□□ 1.08
VARS2-204ENST00000467717 ERVV-1B6SEH8 477 aa21.8■■□□□ 1.08
VARS2-204ENST00000467717 RGL2O15211 777 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms