RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 KCNQ3O43525 872 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 STARD3NLO95772 234 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
ZC3HC1-204ENST00000467642 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
ZC3HC1-204ENST00000467642 CYP19A1P11511 503 aaPredicted RBP12.99□□□□□ -0.33
ZC3HC1-204ENST00000467642 RFC4P35249 363 aa12.99□□□□□ -0.33
ZC3HC1-204ENST00000467642 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
ZC3HC1-204ENST00000467642 CCDC87Q9NVE4 849 aa12.99□□□□□ -0.33
ZC3HC1-204ENST00000467642 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 TJP1Q07157 1748 aa12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 ADRA2BP18089 450 aa12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
ZC3HC1-204ENST00000467642 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
ZC3HC1-204ENST00000467642 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
ZC3HC1-204ENST00000467642 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
ZC3HC1-204ENST00000467642 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
ZC3HC1-204ENST00000467642 FHDC1Q9C0D6 1143 aaPredicted RBP12.97□□□□□ -0.33
ZC3HC1-204ENST00000467642 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.33
ZC3HC1-204ENST00000467642 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.34
ZC3HC1-204ENST00000467642 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.34
ZC3HC1-204ENST00000467642 SYT17Q9BSW7 474 aa12.96□□□□□ -0.34
ZC3HC1-204ENST00000467642 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.34
ZC3HC1-204ENST00000467642 APAF1O14727 1248 aa12.95□□□□□ -0.34
ZC3HC1-204ENST00000467642 NLGN1Q8N2Q7 840 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 TSPYL4Q9UJ04 414 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 ZPR1O75312 459 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 A1BGP04217 495 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
ZC3HC1-204ENST00000467642 UTRNP46939 3433 aa12.93□□□□□ -0.34
ZC3HC1-204ENST00000467642 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
ZC3HC1-204ENST00000467642 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
ZC3HC1-204ENST00000467642 GYS1P13807 737 aa12.93□□□□□ -0.34
ZC3HC1-204ENST00000467642 SRP68Q9UHB9 627 aaKnown RBP12.93□□□□□ -0.34
ZC3HC1-204ENST00000467642 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
ZC3HC1-204ENST00000467642 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
ZC3HC1-204ENST00000467642 COL15A1P39059 1388 aa12.92□□□□□ -0.34
ZC3HC1-204ENST00000467642 MMP10P09238 476 aa12.92□□□□□ -0.34
ZC3HC1-204ENST00000467642 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
ZC3HC1-204ENST00000467642 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
ZC3HC1-204ENST00000467642 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
ZC3HC1-204ENST00000467642 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
ZC3HC1-204ENST00000467642 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
ZC3HC1-204ENST00000467642 NOP58Q9Y2X3 529 aaKnown RBP12.91□□□□□ -0.34
ZC3HC1-204ENST00000467642 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
ZC3HC1-204ENST00000467642 A0A087WZG4 1122 aa12.9□□□□□ -0.34
ZC3HC1-204ENST00000467642 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
ZC3HC1-204ENST00000467642 IL6STP40189 918 aaPredicted RBP12.9□□□□□ -0.34
ZC3HC1-204ENST00000467642 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
ZC3HC1-204ENST00000467642 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
ZC3HC1-204ENST00000467642 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.35
ZC3HC1-204ENST00000467642 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.35
ZC3HC1-204ENST00000467642 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.35
ZC3HC1-204ENST00000467642 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
ZC3HC1-204ENST00000467642 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
ZC3HC1-204ENST00000467642 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
ZC3HC1-204ENST00000467642 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
ZC3HC1-204ENST00000467642 CHL1O00533 1208 aa12.88□□□□□ -0.35
ZC3HC1-204ENST00000467642 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
ZC3HC1-204ENST00000467642 CALD1Q05682 793 aaKnown RBP12.88□□□□□ -0.35
ZC3HC1-204ENST00000467642 NLGN2Q8NFZ4 835 aa12.88□□□□□ -0.35
ZC3HC1-204ENST00000467642 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
ZC3HC1-204ENST00000467642 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 TM4SF1P30408 202 aa12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 NBPF10Q6P3W6 841 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 BCL2L12Q9HB09 334 aa12.86□□□□□ -0.35
ZC3HC1-204ENST00000467642 NFIXQ14938 502 aa12.85□□□□□ -0.35
ZC3HC1-204ENST00000467642 GPR162Q16538 588 aa12.85□□□□□ -0.35
ZC3HC1-204ENST00000467642 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
ZC3HC1-204ENST00000467642 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
ZC3HC1-204ENST00000467642 MYL6BP14649 208 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 GNAI1P63096 354 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 DDR1Q08345 913 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 WWC1Q8IX03 1113 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
ZC3HC1-204ENST00000467642 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
ZC3HC1-204ENST00000467642 CAMTA2O94983 1202 aa12.83□□□□□ -0.36
ZC3HC1-204ENST00000467642 ZNF853P0CG23 659 aa12.83□□□□□ -0.36
ZC3HC1-204ENST00000467642 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
ZC3HC1-204ENST00000467642 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
ZC3HC1-204ENST00000467642 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms