RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
DDX56-208ENST00000467318 CICQ96RK0 1608 aaPredicted RBP18.97■□□□□ 0.63
DDX56-208ENST00000467318 ITPK1Q13572 414 aa18.97■□□□□ 0.63
DDX56-208ENST00000467318 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
DDX56-208ENST00000467318 EZH2Q15910 746 aaKnown RBP18.96■□□□□ 0.63
DDX56-208ENST00000467318 HDGFL1Q5TGJ6 251 aa18.96■□□□□ 0.63
DDX56-208ENST00000467318 CCDC30Q5VVM6 783 aa18.96■□□□□ 0.63
DDX56-208ENST00000467318 LRRC4BQ9NT99 713 aa18.96■□□□□ 0.63
DDX56-208ENST00000467318 CYP19A1P11511 503 aaPredicted RBP18.95■□□□□ 0.62
DDX56-208ENST00000467318 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
DDX56-208ENST00000467318 RC3H1Q5TC82 1133 aaKnown RBP18.94■□□□□ 0.62
DDX56-208ENST00000467318 TJP1Q07157 1748 aa18.93■□□□□ 0.62
DDX56-208ENST00000467318 LINC00116Q8NCU8 138 aa18.93■□□□□ 0.62
DDX56-208ENST00000467318 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
DDX56-208ENST00000467318 CNTNAP4Q9C0A0 1308 aa18.93■□□□□ 0.62
DDX56-208ENST00000467318 LAMB4A4D0S4 1761 aa18.92■□□□□ 0.62
DDX56-208ENST00000467318 C5P01031 1676 aa18.92■□□□□ 0.62
DDX56-208ENST00000467318 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
DDX56-208ENST00000467318 STK31Q9BXU1 1019 aa18.92■□□□□ 0.62
DDX56-208ENST00000467318 CRKLP46109 303 aaKnown RBP18.92■□□□□ 0.62
DDX56-208ENST00000467318 CCDC87Q9NVE4 849 aa18.92■□□□□ 0.62
DDX56-208ENST00000467318 A1BGP04217 495 aa18.91■□□□□ 0.62
DDX56-208ENST00000467318 NECTIN2Q92692 538 aa18.91■□□□□ 0.62
DDX56-208ENST00000467318 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.62
DDX56-208ENST00000467318 TAF1LQ8IZX4 1826 aa18.91■□□□□ 0.62
DDX56-208ENST00000467318 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
DDX56-208ENST00000467318 RARSP54136 660 aaKnown RBP18.89■□□□□ 0.61
DDX56-208ENST00000467318 INTS5Q6P9B9 1019 aaKnown RBP18.89■□□□□ 0.61
DDX56-208ENST00000467318 CHPF2Q9P2E5 772 aa18.89■□□□□ 0.61
DDX56-208ENST00000467318 IL6STP40189 918 aaPredicted RBP18.89■□□□□ 0.61
DDX56-208ENST00000467318 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
DDX56-208ENST00000467318 ZBTB1Q9Y2K1 713 aa18.89■□□□□ 0.61
DDX56-208ENST00000467318 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 PIP4K2AP48426 406 aaPredicted RBP18.88■□□□□ 0.61
DDX56-208ENST00000467318 BRPF1P55201 1214 aaPredicted RBP18.88■□□□□ 0.61
DDX56-208ENST00000467318 PDIA6Q15084 440 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 SMIM5Q71RC9 77 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
DDX56-208ENST00000467318 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 AK7Q96M32 723 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 RCAN3Q9UKA8 241 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
DDX56-208ENST00000467318 NBPF26B4DH59 902 aa18.87■□□□□ 0.61
DDX56-208ENST00000467318 CANXP27824 592 aaKnown RBP18.87■□□□□ 0.61
DDX56-208ENST00000467318 NBPF14Q5TI25 921 aa18.87■□□□□ 0.61
DDX56-208ENST00000467318 NBPF10Q6P3W6 841 aaKnown RBP18.87■□□□□ 0.61
DDX56-208ENST00000467318 NBPF15Q8N660 670 aa18.87■□□□□ 0.61
DDX56-208ENST00000467318 TSHZ2Q9NRE2 1034 aa18.87■□□□□ 0.61
DDX56-208ENST00000467318 RREB1Q92766 1687 aa18.87■□□□□ 0.61
DDX56-208ENST00000467318 CACNA1FO60840 1977 aa18.87■□□□□ 0.61
DDX56-208ENST00000467318 RPS6KA4O75676 772 aa18.86■□□□□ 0.61
DDX56-208ENST00000467318 SMC4Q9NTJ3 1288 aa18.86■□□□□ 0.61
DDX56-208ENST00000467318 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
DDX56-208ENST00000467318 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
DDX56-208ENST00000467318 TCERG1O14776 1098 aaKnown RBP18.85■□□□□ 0.61
DDX56-208ENST00000467318 GNPATO15228 680 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 MYL6BP14649 208 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 EIF5P55010 431 aaKnown RBP18.85■□□□□ 0.61
DDX56-208ENST00000467318 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 NUP188Q5SRE5 1749 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 LRP10Q7Z4F1 713 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 AMIGO3Q86WK7 504 aa18.85■□□□□ 0.61
DDX56-208ENST00000467318 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
DDX56-208ENST00000467318 ADRA2BP18089 450 aa18.84■□□□□ 0.61
DDX56-208ENST00000467318 MRPL50Q8N5N7 158 aaKnown RBP18.84■□□□□ 0.61
DDX56-208ENST00000467318 ANXA1P04083 346 aa18.83■□□□□ 0.61
DDX56-208ENST00000467318 SSFA2P28290 1259 aa18.83■□□□□ 0.61
DDX56-208ENST00000467318 ZNF827Q17R98 1081 aa18.83■□□□□ 0.61
DDX56-208ENST00000467318 BCL2L13Q9BXK5 485 aa18.83■□□□□ 0.61
DDX56-208ENST00000467318 STK32BQ9NY57 414 aa18.83■□□□□ 0.61
DDX56-208ENST00000467318 TFCP2L1Q9NZI6 479 aa18.83■□□□□ 0.61
DDX56-208ENST00000467318 A0A087WZG4 1122 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 ZNF330Q9Y3S2 320 aaPredicted RBP18.82■□□□□ 0.6
DDX56-208ENST00000467318 KIF16BQ96L93 1317 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 BCAR3O75815 825 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 TRAPPC3LQ5T215 181 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 COPS6Q7L5N1 327 aa18.82■□□□□ 0.6
DDX56-208ENST00000467318 FLIIQ13045 1269 aa18.81■□□□□ 0.6
DDX56-208ENST00000467318 PHAXQ9H814 394 aaKnown RBP18.81■□□□□ 0.6
DDX56-208ENST00000467318 COL15A1P39059 1388 aa18.8■□□□□ 0.6
DDX56-208ENST00000467318 PTPRCP08575 1304 aa18.8■□□□□ 0.6
DDX56-208ENST00000467318 SOCS7O14512 581 aa18.8■□□□□ 0.6
DDX56-208ENST00000467318 DDX58O95786 925 aaKnown RBP18.8■□□□□ 0.6
DDX56-208ENST00000467318 XAGE3Q8WTP9 111 aa18.8■□□□□ 0.6
DDX56-208ENST00000467318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.79■□□□□ 0.6
DDX56-208ENST00000467318 IPO8O15397 1037 aaKnown RBP18.79■□□□□ 0.6
DDX56-208ENST00000467318 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
DDX56-208ENST00000467318 G2E3Q7L622 706 aa18.79■□□□□ 0.6
DDX56-208ENST00000467318 ARHGAP45Q92619 1136 aa18.79■□□□□ 0.6
DDX56-208ENST00000467318 FKBP5Q13451 457 aaPredicted RBP18.79■□□□□ 0.6
DDX56-208ENST00000467318 KIF6Q6ZMV9 814 aa18.79■□□□□ 0.6
DDX56-208ENST00000467318 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
DDX56-208ENST00000467318 DZIP3Q86Y13 1208 aaKnown RBP18.79■□□□□ 0.6
DDX56-208ENST00000467318 ARHGEF1Q92888 912 aaKnown RBP18.79■□□□□ 0.6
DDX56-208ENST00000467318 UBR3Q6ZT12 1888 aa18.78■□□□□ 0.6
DDX56-208ENST00000467318 RFC4P35249 363 aa18.78■□□□□ 0.6
DDX56-208ENST00000467318 ARXQ96QS3 562 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms