RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 YTHDC1Q96MU7 727 aaKnown RBP21.07■□□□□ 0.96
HLA-C-205ENST00000466892 CRKLP46109 303 aaKnown RBP21.06■□□□□ 0.96
HLA-C-205ENST00000466892 CCDC87Q9NVE4 849 aa21.06■□□□□ 0.96
HLA-C-205ENST00000466892 USP16Q9Y5T5 823 aa21.06■□□□□ 0.96
HLA-C-205ENST00000466892 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
HLA-C-205ENST00000466892 HDGFL1Q5TGJ6 251 aa21.05■□□□□ 0.96
HLA-C-205ENST00000466892 AKT1S1Q96B36 256 aa21.05■□□□□ 0.96
HLA-C-205ENST00000466892 AK7Q96M32 723 aa21.05■□□□□ 0.96
HLA-C-205ENST00000466892 COL5A3P25940 1745 aaPredicted RBP21.04■□□□□ 0.96
HLA-C-205ENST00000466892 VAMP4O75379 141 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 ADRA2BP18089 450 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 KCNQ4P56696 695 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 STK32BQ9NY57 414 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 LAMB4A4D0S4 1761 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
HLA-C-205ENST00000466892 PRAMEF22A3QJZ6 481 aa21.03■□□□□ 0.96
HLA-C-205ENST00000466892 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
HLA-C-205ENST00000466892 TSPYL6Q8N831 410 aa21.03■□□□□ 0.96
HLA-C-205ENST00000466892 FLAD1Q8NFF5 587 aa21.03■□□□□ 0.96
HLA-C-205ENST00000466892 DBF4Q9UBU7 674 aaPredicted RBP21.03■□□□□ 0.96
HLA-C-205ENST00000466892 NUP188Q5SRE5 1749 aa21.02■□□□□ 0.96
HLA-C-205ENST00000466892 RPS6KA4O75676 772 aa21.02■□□□□ 0.96
HLA-C-205ENST00000466892 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
HLA-C-205ENST00000466892 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
HLA-C-205ENST00000466892 SSFA2P28290 1259 aa21.01■□□□□ 0.95
HLA-C-205ENST00000466892 SLC15A2Q16348 729 aa21.01■□□□□ 0.95
HLA-C-205ENST00000466892 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
HLA-C-205ENST00000466892 RTCBQ9Y3I0 505 aaKnown RBP21.01■□□□□ 0.95
HLA-C-205ENST00000466892 GNPATO15228 680 aa21■□□□□ 0.95
HLA-C-205ENST00000466892 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
HLA-C-205ENST00000466892 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
HLA-C-205ENST00000466892 STK31Q9BXU1 1019 aa21■□□□□ 0.95
HLA-C-205ENST00000466892 ZBTB1Q9Y2K1 713 aa21■□□□□ 0.95
HLA-C-205ENST00000466892 TAF1LQ8IZX4 1826 aa20.99■□□□□ 0.95
HLA-C-205ENST00000466892 A0A087WZG4 1122 aa20.99■□□□□ 0.95
HLA-C-205ENST00000466892 ZNF827Q17R98 1081 aa20.99■□□□□ 0.95
HLA-C-205ENST00000466892 TFCP2L1Q9NZI6 479 aa20.99■□□□□ 0.95
HLA-C-205ENST00000466892 A1BGP04217 495 aa20.98■□□□□ 0.95
HLA-C-205ENST00000466892 EIF5P55010 431 aaKnown RBP20.98■□□□□ 0.95
HLA-C-205ENST00000466892 ALDH1L2Q3SY69 923 aa20.98■□□□□ 0.95
HLA-C-205ENST00000466892 ANO8Q9HCE9 1232 aaPredicted RBP20.98■□□□□ 0.95
HLA-C-205ENST00000466892 HYPKQ9NX55 129 aa20.98■□□□□ 0.95
HLA-C-205ENST00000466892 NBPF26B4DH59 902 aa20.97■□□□□ 0.95
HLA-C-205ENST00000466892 RGL2O15211 777 aa20.97■□□□□ 0.95
HLA-C-205ENST00000466892 PDIA6Q15084 440 aa20.97■□□□□ 0.95
HLA-C-205ENST00000466892 NBPF10Q6P3W6 841 aaKnown RBP20.97■□□□□ 0.95
HLA-C-205ENST00000466892 NBPF15Q8N660 670 aa20.97■□□□□ 0.95
HLA-C-205ENST00000466892 CANXP27824 592 aaKnown RBP20.96■□□□□ 0.95
HLA-C-205ENST00000466892 CHPF2Q9P2E5 772 aa20.96■□□□□ 0.95
HLA-C-205ENST00000466892 COL15A1P39059 1388 aa20.96■□□□□ 0.95
HLA-C-205ENST00000466892 TRAPPC3LQ5T215 181 aa20.95■□□□□ 0.94
HLA-C-205ENST00000466892 LRP10Q7Z4F1 713 aa20.95■□□□□ 0.94
HLA-C-205ENST00000466892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
HLA-C-205ENST00000466892 BRPF1P55201 1214 aaPredicted RBP20.94■□□□□ 0.94
HLA-C-205ENST00000466892 NECTIN2Q92692 538 aa20.93■□□□□ 0.94
HLA-C-205ENST00000466892 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
HLA-C-205ENST00000466892 QSER1Q2KHR3 1735 aa20.92■□□□□ 0.94
HLA-C-205ENST00000466892 SLC4A2P04920 1241 aa20.91■□□□□ 0.94
HLA-C-205ENST00000466892 MYL6BP14649 208 aa20.91■□□□□ 0.94
HLA-C-205ENST00000466892 RFC4P35249 363 aa20.91■□□□□ 0.94
HLA-C-205ENST00000466892 RARSP54136 660 aaKnown RBP20.91■□□□□ 0.94
HLA-C-205ENST00000466892 SLC16A10Q8TF71 515 aa20.91■□□□□ 0.94
HLA-C-205ENST00000466892 ERVV-1B6SEH8 477 aa20.9■□□□□ 0.94
HLA-C-205ENST00000466892 PROSER3Q2NL68 480 aa20.9■□□□□ 0.94
HLA-C-205ENST00000466892 ARHGEF1Q92888 912 aaKnown RBP20.9■□□□□ 0.94
HLA-C-205ENST00000466892 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
HLA-C-205ENST00000466892 USP42Q9H9J4 1324 aaKnown RBP20.89■□□□□ 0.93
HLA-C-205ENST00000466892 PHF14O94880 888 aa20.89■□□□□ 0.93
HLA-C-205ENST00000466892 DDX58O95786 925 aaKnown RBP20.89■□□□□ 0.93
HLA-C-205ENST00000466892 KIF6Q6ZMV9 814 aa20.89■□□□□ 0.93
HLA-C-205ENST00000466892 DZIP3Q86Y13 1208 aaKnown RBP20.89■□□□□ 0.93
HLA-C-205ENST00000466892 SSH1Q8WYL5 1049 aa20.89■□□□□ 0.93
HLA-C-205ENST00000466892 UBR3Q6ZT12 1888 aa20.89■□□□□ 0.93
HLA-C-205ENST00000466892 KIF16BQ96L93 1317 aa20.88■□□□□ 0.93
HLA-C-205ENST00000466892 ZPR1O75312 459 aa20.88■□□□□ 0.93
HLA-C-205ENST00000466892 PIP4K2AP48426 406 aaPredicted RBP20.88■□□□□ 0.93
HLA-C-205ENST00000466892 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
HLA-C-205ENST00000466892 COPS6Q7L5N1 327 aa20.88■□□□□ 0.93
HLA-C-205ENST00000466892 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
HLA-C-205ENST00000466892 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
HLA-C-205ENST00000466892 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
HLA-C-205ENST00000466892 MYH14Q7Z406 1995 aaKnown RBP20.88■□□□□ 0.93
HLA-C-205ENST00000466892 PTPRCP08575 1304 aa20.87■□□□□ 0.93
HLA-C-205ENST00000466892 FLIIQ13045 1269 aa20.87■□□□□ 0.93
HLA-C-205ENST00000466892 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
HLA-C-205ENST00000466892 XAGE3Q8WTP9 111 aa20.87■□□□□ 0.93
HLA-C-205ENST00000466892 ZNF652Q9Y2D9 606 aa20.87■□□□□ 0.93
HLA-C-205ENST00000466892 ZNF330Q9Y3S2 320 aaPredicted RBP20.87■□□□□ 0.93
HLA-C-205ENST00000466892 MAP3K15Q6ZN16 1313 aa20.86■□□□□ 0.93
HLA-C-205ENST00000466892 R3HDM1Q15032 1099 aaKnown RBP20.86■□□□□ 0.93
HLA-C-205ENST00000466892 PLBD2Q8NHP8 589 aa20.86■□□□□ 0.93
HLA-C-205ENST00000466892 CAMTA2O94983 1202 aa20.85■□□□□ 0.93
HLA-C-205ENST00000466892 ANXA1P04083 346 aa20.85■□□□□ 0.93
HLA-C-205ENST00000466892 ANKRD13DQ6ZTN6 518 aa20.85■□□□□ 0.93
HLA-C-205ENST00000466892 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
HLA-C-205ENST00000466892 NLGN1Q8N2Q7 840 aa20.84■□□□□ 0.93
HLA-C-205ENST00000466892 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
HLA-C-205ENST00000466892 PHAXQ9H814 394 aaKnown RBP20.84■□□□□ 0.93
HLA-C-205ENST00000466892 TBC1D2BQ9UPU7 963 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms