RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 CCDC125Q86Z20 511 aa8.61□□□□□ -1.03
ATP2B4-206ENST00000466407 ATP10DQ9P241 1426 aa8.61□□□□□ -1.03
ATP2B4-206ENST00000466407 BCORQ6W2J9 1755 aa8.61□□□□□ -1.03
ATP2B4-206ENST00000466407 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 PLSCR1O15162 318 aa8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 RC3H1Q5TC82 1133 aaKnown RBP8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 C8orf58Q8NAV2 365 aa8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 SSH1Q8WYL5 1049 aa8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 MYH14Q7Z406 1995 aaKnown RBP8.6□□□□□ -1.03
ATP2B4-206ENST00000466407 NUP98P52948 1817 aa8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 AFDNP55196 1824 aaKnown RBP8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 CNTNAP4Q9C0A0 1308 aa8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 NPM2Q86SE8 214 aaKnown RBP8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 FTSJ3Q8IY81 847 aaKnown RBP8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 MRPL50Q8N5N7 158 aaKnown RBP8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 DDX19BQ9UMR2 479 aa8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 UBR3Q6ZT12 1888 aa8.59□□□□□ -1.03
ATP2B4-206ENST00000466407 ABCC4O15439 1325 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 C4BP0C0L5 1744 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 A0A087WZG4 1122 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 ADRA2BP18089 450 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 IL6STP40189 918 aaPredicted RBP8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 CCT4P50991 539 aaKnown RBP8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 SIK1P57059 783 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 TSPYL6Q8N831 410 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 SCN7AQ01118 1682 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 MYH3P11055 1940 aa8.58□□□□□ -1.04
ATP2B4-206ENST00000466407 SLC4A2P04920 1241 aa8.57□□□□□ -1.04
ATP2B4-206ENST00000466407 FLIIQ13045 1269 aa8.57□□□□□ -1.04
ATP2B4-206ENST00000466407 HSP90AB3PQ58FF7 597 aa8.57□□□□□ -1.04
ATP2B4-206ENST00000466407 ERVV-1B6SEH8 477 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 TRIM27P14373 513 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 HSP90B1P14625 803 aaKnown RBP8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 NEXNQ0ZGT2 675 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 SLC39A6Q13433 755 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 FLAD1Q8NFF5 587 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 COL15A1P39059 1388 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 LAMB2P55268 1798 aa8.56□□□□□ -1.04
ATP2B4-206ENST00000466407 C4AP0C0L4 1744 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 BCAR3O75815 825 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 CYP19A1P11511 503 aaPredicted RBP8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 KSR2Q6VAB6 950 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 PLBD2Q8NHP8 589 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 RBM42Q9BTD8 480 aaKnown RBP8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 CHPF2Q9P2E5 772 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 ZNF652Q9Y2D9 606 aa8.55□□□□□ -1.04
ATP2B4-206ENST00000466407 EP400Q96L91 3159 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 ELL2O00472 640 aaPredicted RBP8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 KCNQ3O43525 872 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 PTCD1O75127 700 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 GNAI3P08754 354 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 EIF2S2P20042 333 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 SF3B2Q13435 895 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 KIF6Q6ZMV9 814 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 LINS1Q8NG48 757 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 DNAAF4Q8WXU2 420 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 ACSBG1Q96GR2 724 aa8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 NOB1Q9ULX3 412 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-206ENST00000466407 SSFA2P28290 1259 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 BAG6P46379 1132 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 PDIA6Q15084 440 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 ANKRD13DQ6ZTN6 518 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 LRP10Q7Z4F1 713 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 FRAT1Q92837 279 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 CCNL1Q9UK58 526 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 USP16Q9Y5T5 823 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 COL24A1Q17RW2 1714 aa8.53□□□□□ -1.04
ATP2B4-206ENST00000466407 SENP3-EIF4A1A0A087X0R7 540 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 KCNQ2O43526 872 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 RPS6KA4O75676 772 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 CRKLP46109 303 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 EIF5P55010 431 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 DNAJC10Q8IXB1 793 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 AK7Q96M32 723 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 SRCIN1Q9C0H9 1055 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 PPP4R2Q9NY27 417 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
ATP2B4-206ENST00000466407 PARP10Q53GL7 1025 aa8.51□□□□□ -1.05
ATP2B4-206ENST00000466407 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms