RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
CD40-204ENST00000466205 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
CD40-204ENST00000466205 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.26
CD40-204ENST00000466205 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
CD40-204ENST00000466205 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
CD40-204ENST00000466205 RIPK4P57078 832 aa13.45□□□□□ -0.26
CD40-204ENST00000466205 MMP10P09238 476 aa13.44□□□□□ -0.26
CD40-204ENST00000466205 GYS1P13807 737 aa13.44□□□□□ -0.26
CD40-204ENST00000466205 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
CD40-204ENST00000466205 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
CD40-204ENST00000466205 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CD40-204ENST00000466205 A1BGP04217 495 aa13.43□□□□□ -0.26
CD40-204ENST00000466205 ADRA2BP18089 450 aa13.43□□□□□ -0.26
CD40-204ENST00000466205 TMPOP42166 694 aaKnown RBP13.43□□□□□ -0.26
CD40-204ENST00000466205 TAF7Q15545 349 aaPredicted RBP13.43□□□□□ -0.26
CD40-204ENST00000466205 USPL1Q5W0Q7 1092 aa13.43□□□□□ -0.26
CD40-204ENST00000466205 COL15A1P39059 1388 aa13.43□□□□□ -0.26
CD40-204ENST00000466205 ANP32CO43423 234 aa13.42□□□□□ -0.26
CD40-204ENST00000466205 STARD3NLO95772 234 aa13.42□□□□□ -0.26
CD40-204ENST00000466205 FKBP8Q14318 412 aa13.42□□□□□ -0.26
CD40-204ENST00000466205 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
CD40-204ENST00000466205 USP16Q9Y5T5 823 aa13.42□□□□□ -0.26
CD40-204ENST00000466205 USP42Q9H9J4 1324 aaKnown RBP13.41□□□□□ -0.26
CD40-204ENST00000466205 ZPR1O75312 459 aa13.41□□□□□ -0.26
CD40-204ENST00000466205 GPR162Q16538 588 aa13.41□□□□□ -0.26
CD40-204ENST00000466205 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
CD40-204ENST00000466205 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
CD40-204ENST00000466205 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
CD40-204ENST00000466205 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
CD40-204ENST00000466205 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
CD40-204ENST00000466205 TEX13AQ9BXU3 409 aaPredicted RBP13.39□□□□□ -0.27
CD40-204ENST00000466205 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
CD40-204ENST00000466205 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
CD40-204ENST00000466205 KDM3BQ7LBC6 1761 aa13.39□□□□□ -0.27
CD40-204ENST00000466205 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
CD40-204ENST00000466205 DDR1Q08345 913 aa13.38□□□□□ -0.27
CD40-204ENST00000466205 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
CD40-204ENST00000466205 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
CD40-204ENST00000466205 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
CD40-204ENST00000466205 APAF1O14727 1248 aa13.37□□□□□ -0.27
CD40-204ENST00000466205 EIF4A1P60842 406 aaKnown RBP13.37□□□□□ -0.27
CD40-204ENST00000466205 LMOD3Q0VAK6 560 aa13.37□□□□□ -0.27
CD40-204ENST00000466205 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
CD40-204ENST00000466205 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
CD40-204ENST00000466205 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
CD40-204ENST00000466205 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
CD40-204ENST00000466205 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
CD40-204ENST00000466205 YBX3P16989 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
CD40-204ENST00000466205 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
CD40-204ENST00000466205 GIGYF1O75420 1035 aaPredicted RBP13.35□□□□□ -0.27
CD40-204ENST00000466205 IL6STP40189 918 aaPredicted RBP13.35□□□□□ -0.27
CD40-204ENST00000466205 NFIXQ14938 502 aa13.35□□□□□ -0.27
CD40-204ENST00000466205 DZIP3Q86Y13 1208 aaKnown RBP13.35□□□□□ -0.27
CD40-204ENST00000466205 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 A0A087WZG4 1122 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 MYL6BP14649 208 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
CD40-204ENST00000466205 YY1P25490 414 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 TM4SF1P30408 202 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 TBC1D9BQ66K14 1250 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
CD40-204ENST00000466205 CCDC24Q8N4L8 307 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 NECTIN2Q92692 538 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
CD40-204ENST00000466205 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.28
CD40-204ENST00000466205 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
CD40-204ENST00000466205 SCN7AQ01118 1682 aa13.33□□□□□ -0.28
CD40-204ENST00000466205 CAMTA2O94983 1202 aa13.32□□□□□ -0.28
CD40-204ENST00000466205 DPEP1P16444 411 aa13.32□□□□□ -0.28
CD40-204ENST00000466205 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
CD40-204ENST00000466205 ANXA1P04083 346 aa13.31□□□□□ -0.28
CD40-204ENST00000466205 SERPINB2P05120 415 aa13.31□□□□□ -0.28
CD40-204ENST00000466205 CHRNA5P30532 468 aa13.31□□□□□ -0.28
CD40-204ENST00000466205 FAM9BQ8IZU0 186 aa13.31□□□□□ -0.28
CD40-204ENST00000466205 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
CD40-204ENST00000466205 UTRNP46939 3433 aa13.3□□□□□ -0.28
CD40-204ENST00000466205 KIAA1551Q9HCM1 1747 aa13.3□□□□□ -0.28
CD40-204ENST00000466205 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
CD40-204ENST00000466205 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
CD40-204ENST00000466205 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
CD40-204ENST00000466205 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
CD40-204ENST00000466205 CHL1O00533 1208 aa13.29□□□□□ -0.28
CD40-204ENST00000466205 NPHP1O15259 732 aa13.29□□□□□ -0.28
CD40-204ENST00000466205 TGFB2P61812 414 aa13.29□□□□□ -0.28
CD40-204ENST00000466205 HLFQ16534 295 aa13.29□□□□□ -0.28
CD40-204ENST00000466205 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
CD40-204ENST00000466205 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
CD40-204ENST00000466205 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
CD40-204ENST00000466205 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
CD40-204ENST00000466205 ZBTB3Q9H5J0 574 aa13.28□□□□□ -0.28
CD40-204ENST00000466205 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
CD40-204ENST00000466205 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
CD40-204ENST00000466205 GRIN3BO60391 1043 aa13.27□□□□□ -0.29
CD40-204ENST00000466205 KCNA3P22001 575 aa13.27□□□□□ -0.29
CD40-204ENST00000466205 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
CD40-204ENST00000466205 BABAM1Q9NWV8 329 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms