RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 KCNQ4P56696 695 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 SLC27A3Q5K4L6 730 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 HDGFL1Q5TGJ6 251 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 CCDC125Q86Z20 511 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 CAMKK2Q96RR4 588 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 TEX13AQ9BXU3 409 aaPredicted RBP14.36□□□□□ -0.11
VCP-204ENST00000466100 N4BP2Q86UW6 1770 aaPredicted RBP14.36□□□□□ -0.11
VCP-204ENST00000466100 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 PDIA6Q15084 440 aa14.35□□□□□ -0.11
VCP-204ENST00000466100 ALDH1L2Q3SY69 923 aa14.35□□□□□ -0.11
VCP-204ENST00000466100 LRP10Q7Z4F1 713 aa14.35□□□□□ -0.11
VCP-204ENST00000466100 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
VCP-204ENST00000466100 UPF1Q92900 1129 aaKnown RBP eCLIP14.35□□□□□ -0.11
VCP-204ENST00000466100 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
VCP-204ENST00000466100 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
VCP-204ENST00000466100 NBPF26B4DH59 902 aa14.34□□□□□ -0.11
VCP-204ENST00000466100 EIF2S2P20042 333 aaKnown RBP14.34□□□□□ -0.11
VCP-204ENST00000466100 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
VCP-204ENST00000466100 NBPF14Q5TI25 921 aa14.34□□□□□ -0.11
VCP-204ENST00000466100 NBPF10Q6P3W6 841 aaKnown RBP14.34□□□□□ -0.11
VCP-204ENST00000466100 NBPF15Q8N660 670 aa14.34□□□□□ -0.11
VCP-204ENST00000466100 SCN7AQ01118 1682 aa14.33□□□□□ -0.11
VCP-204ENST00000466100 ARFGEF2Q9Y6D5 1785 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 STARD3NLO95772 234 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 A1BGP04217 495 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 CRKLP46109 303 aaKnown RBP14.33□□□□□ -0.12
VCP-204ENST00000466100 BAG6P46379 1132 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 BRPF1P55201 1214 aaPredicted RBP14.33□□□□□ -0.12
VCP-204ENST00000466100 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
VCP-204ENST00000466100 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 INTS5Q6P9B9 1019 aaKnown RBP14.33□□□□□ -0.12
VCP-204ENST00000466100 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.12
VCP-204ENST00000466100 NECTIN2Q92692 538 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 RCAN3Q9UKA8 241 aa14.33□□□□□ -0.12
VCP-204ENST00000466100 TCERG1O14776 1098 aaKnown RBP14.32□□□□□ -0.12
VCP-204ENST00000466100 SF3B2Q13435 895 aaKnown RBP14.32□□□□□ -0.12
VCP-204ENST00000466100 EZH2Q15910 746 aaKnown RBP14.32□□□□□ -0.12
VCP-204ENST00000466100 RC3H1Q5TC82 1133 aaKnown RBP14.32□□□□□ -0.12
VCP-204ENST00000466100 CHMP4AQ9BY43 222 aa14.32□□□□□ -0.12
VCP-204ENST00000466100 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
VCP-204ENST00000466100 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
VCP-204ENST00000466100 DBF4Q9UBU7 674 aaPredicted RBP14.32□□□□□ -0.12
VCP-204ENST00000466100 ZBTB1Q9Y2K1 713 aa14.32□□□□□ -0.12
VCP-204ENST00000466100 BCAR3O75815 825 aa14.31□□□□□ -0.12
VCP-204ENST00000466100 ANXA1P04083 346 aa14.31□□□□□ -0.12
VCP-204ENST00000466100 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
VCP-204ENST00000466100 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
VCP-204ENST00000466100 SMC4Q9NTJ3 1288 aa14.31□□□□□ -0.12
VCP-204ENST00000466100 ANKRD36CQ5JPF3 1778 aa14.3□□□□□ -0.12
VCP-204ENST00000466100 NUP98P52948 1817 aa14.3□□□□□ -0.12
VCP-204ENST00000466100 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
VCP-204ENST00000466100 STK31Q9BXU1 1019 aa14.3□□□□□ -0.12
VCP-204ENST00000466100 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
VCP-204ENST00000466100 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
VCP-204ENST00000466100 EIF5P55010 431 aaKnown RBP14.29□□□□□ -0.12
VCP-204ENST00000466100 G2E3Q7L622 706 aa14.29□□□□□ -0.12
VCP-204ENST00000466100 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
VCP-204ENST00000466100 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
VCP-204ENST00000466100 IL6STP40189 918 aaPredicted RBP14.28□□□□□ -0.12
VCP-204ENST00000466100 ZNF827Q17R98 1081 aa14.28□□□□□ -0.12
VCP-204ENST00000466100 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
VCP-204ENST00000466100 HYPKQ9NX55 129 aa14.28□□□□□ -0.12
VCP-204ENST00000466100 COL15A1P39059 1388 aa14.27□□□□□ -0.12
VCP-204ENST00000466100 KIF16BQ96L93 1317 aa14.27□□□□□ -0.12
VCP-204ENST00000466100 RPS6KA4O75676 772 aa14.27□□□□□ -0.13
VCP-204ENST00000466100 MYL6BP14649 208 aa14.27□□□□□ -0.13
VCP-204ENST00000466100 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.13
VCP-204ENST00000466100 CANXP27824 592 aaKnown RBP14.27□□□□□ -0.13
VCP-204ENST00000466100 FLIIQ13045 1269 aa14.27□□□□□ -0.13
VCP-204ENST00000466100 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.13
VCP-204ENST00000466100 ADCY9O60503 1353 aa14.26□□□□□ -0.13
VCP-204ENST00000466100 GNPATO15228 680 aa14.26□□□□□ -0.13
VCP-204ENST00000466100 XAGE3Q8WTP9 111 aa14.26□□□□□ -0.13
VCP-204ENST00000466100 AFDNP55196 1824 aaKnown RBP14.26□□□□□ -0.13
VCP-204ENST00000466100 PXDNLA1KZ92 1463 aa14.25□□□□□ -0.13
VCP-204ENST00000466100 PTPRCP08575 1304 aa14.25□□□□□ -0.13
VCP-204ENST00000466100 TTLL7Q6ZT98 887 aa14.25□□□□□ -0.13
VCP-204ENST00000466100 AK7Q96M32 723 aa14.25□□□□□ -0.13
VCP-204ENST00000466100 NOB1Q9ULX3 412 aaKnown RBP14.25□□□□□ -0.13
VCP-204ENST00000466100 CASZ1Q86V15 1759 aa14.24□□□□□ -0.13
VCP-204ENST00000466100 RRP1P56182 461 aaKnown RBP14.24□□□□□ -0.13
VCP-204ENST00000466100 SMIM5Q71RC9 77 aa14.24□□□□□ -0.13
VCP-204ENST00000466100 COPS6Q7L5N1 327 aa14.24□□□□□ -0.13
VCP-204ENST00000466100 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
VCP-204ENST00000466100 COL24A1Q17RW2 1714 aa14.24□□□□□ -0.13
VCP-204ENST00000466100 ADRA2BP18089 450 aa14.23□□□□□ -0.13
VCP-204ENST00000466100 SSFA2P28290 1259 aa14.23□□□□□ -0.13
VCP-204ENST00000466100 TNNQ9UQP3 1299 aa14.23□□□□□ -0.13
VCP-204ENST00000466100 RTCBQ9Y3I0 505 aaKnown RBP14.23□□□□□ -0.13
VCP-204ENST00000466100 ABCC4O15439 1325 aa14.22□□□□□ -0.13
VCP-204ENST00000466100 TRIM27P14373 513 aa14.22□□□□□ -0.13
VCP-204ENST00000466100 AIMP1Q12904 312 aaKnown RBP14.22□□□□□ -0.13
VCP-204ENST00000466100 FKBP5Q13451 457 aaPredicted RBP14.22□□□□□ -0.13
VCP-204ENST00000466100 ATF7IPQ6VMQ6 1270 aa14.22□□□□□ -0.13
VCP-204ENST00000466100 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
VCP-204ENST00000466100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms