RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 MYH16Q9H6N6 1097 aa13.93□□□□□ -0.18
NPHP3-203ENST00000465756 C5P01031 1676 aa13.93□□□□□ -0.18
NPHP3-203ENST00000465756 ZNF831Q5JPB2 1677 aa13.93□□□□□ -0.18
NPHP3-203ENST00000465756 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
NPHP3-203ENST00000465756 TMX4Q9H1E5 349 aaPredicted RBP13.92□□□□□ -0.18
NPHP3-203ENST00000465756 IFT57Q9NWB7 429 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 NARFQ9UHQ1 456 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 C4BP0C0L5 1744 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 QSER1Q2KHR3 1735 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 APAF1O14727 1248 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 STK31Q9BXU1 1019 aa13.92□□□□□ -0.18
NPHP3-203ENST00000465756 GPR162Q16538 588 aa13.91□□□□□ -0.18
NPHP3-203ENST00000465756 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
NPHP3-203ENST00000465756 COL15A1P39059 1388 aa13.91□□□□□ -0.18
NPHP3-203ENST00000465756 ST5P78524 1137 aa13.91□□□□□ -0.18
NPHP3-203ENST00000465756 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
NPHP3-203ENST00000465756 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
NPHP3-203ENST00000465756 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
NPHP3-203ENST00000465756 IL16Q14005 1332 aa13.9□□□□□ -0.18
NPHP3-203ENST00000465756 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
NPHP3-203ENST00000465756 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
NPHP3-203ENST00000465756 MSL1Q68DK7 614 aa13.9□□□□□ -0.18
NPHP3-203ENST00000465756 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
NPHP3-203ENST00000465756 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
NPHP3-203ENST00000465756 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.19
NPHP3-203ENST00000465756 SETDB2Q96T68 719 aa13.9□□□□□ -0.19
NPHP3-203ENST00000465756 MMP10P09238 476 aa13.89□□□□□ -0.19
NPHP3-203ENST00000465756 NYXQ9GZU5 481 aa13.89□□□□□ -0.19
NPHP3-203ENST00000465756 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
NPHP3-203ENST00000465756 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
NPHP3-203ENST00000465756 CLEC4GQ6UXB4 293 aa13.89□□□□□ -0.19
NPHP3-203ENST00000465756 ZBTB1Q9Y2K1 713 aa13.88□□□□□ -0.19
NPHP3-203ENST00000465756 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
NPHP3-203ENST00000465756 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
NPHP3-203ENST00000465756 EIF2S2P20042 333 aaKnown RBP13.87□□□□□ -0.19
NPHP3-203ENST00000465756 EIF4A1P60842 406 aaKnown RBP13.87□□□□□ -0.19
NPHP3-203ENST00000465756 TGFB2P61812 414 aa13.87□□□□□ -0.19
NPHP3-203ENST00000465756 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
NPHP3-203ENST00000465756 CCDC30Q5VVM6 783 aa13.87□□□□□ -0.19
NPHP3-203ENST00000465756 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
NPHP3-203ENST00000465756 ADAMTS7Q9UKP4 1686 aa13.87□□□□□ -0.19
NPHP3-203ENST00000465756 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
NPHP3-203ENST00000465756 EIF5P55010 431 aaKnown RBP13.86□□□□□ -0.19
NPHP3-203ENST00000465756 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
NPHP3-203ENST00000465756 PDE6BP35913 854 aa13.86□□□□□ -0.19
NPHP3-203ENST00000465756 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
NPHP3-203ENST00000465756 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
NPHP3-203ENST00000465756 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
NPHP3-203ENST00000465756 PARP10Q53GL7 1025 aa13.85□□□□□ -0.19
NPHP3-203ENST00000465756 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
NPHP3-203ENST00000465756 TPTE2Q6XPS3 522 aa13.85□□□□□ -0.19
NPHP3-203ENST00000465756 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
NPHP3-203ENST00000465756 CHL1O00533 1208 aa13.85□□□□□ -0.19
NPHP3-203ENST00000465756 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
NPHP3-203ENST00000465756 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
NPHP3-203ENST00000465756 CICQ96RK0 1608 aaPredicted RBP13.84□□□□□ -0.19
NPHP3-203ENST00000465756 CARMIL3Q8ND23 1372 aa13.84□□□□□ -0.19
NPHP3-203ENST00000465756 GYS1P13807 737 aa13.84□□□□□ -0.19
NPHP3-203ENST00000465756 THUMPD2Q9BTF0 503 aaKnown RBP13.84□□□□□ -0.19
NPHP3-203ENST00000465756 TAF1LQ8IZX4 1826 aa13.84□□□□□ -0.19
NPHP3-203ENST00000465756 CASZ1Q86V15 1759 aa13.84□□□□□ -0.19
NPHP3-203ENST00000465756 SOGA3Q5TF21 947 aa13.84□□□□□ -0.19
NPHP3-203ENST00000465756 NBPF5PQ86XG9 351 aaPredicted RBP13.84□□□□□ -0.19
NPHP3-203ENST00000465756 CNBD1Q8NA66 436 aa13.84□□□□□ -0.19
NPHP3-203ENST00000465756 PTGER2P43116 358 aa13.83□□□□□ -0.2
NPHP3-203ENST00000465756 A1BGP04217 495 aa13.83□□□□□ -0.2
NPHP3-203ENST00000465756 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
NPHP3-203ENST00000465756 KCPQ6ZWJ8 1503 aa13.83□□□□□ -0.2
NPHP3-203ENST00000465756 H0YIN7 160 aa13.83□□□□□ -0.2
NPHP3-203ENST00000465756 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.2
NPHP3-203ENST00000465756 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
NPHP3-203ENST00000465756 BICDL1Q6ZP65 573 aa13.82□□□□□ -0.2
NPHP3-203ENST00000465756 RNF123Q5XPI4 1314 aa13.82□□□□□ -0.2
NPHP3-203ENST00000465756 SERPINB2P05120 415 aa13.82□□□□□ -0.2
NPHP3-203ENST00000465756 MIS18AQ9NYP9 233 aa13.82□□□□□ -0.2
NPHP3-203ENST00000465756 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
NPHP3-203ENST00000465756 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
NPHP3-203ENST00000465756 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
NPHP3-203ENST00000465756 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
NPHP3-203ENST00000465756 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
NPHP3-203ENST00000465756 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
NPHP3-203ENST00000465756 NIP7Q9Y221 180 aaKnown RBP eCLIP13.81□□□□□ -0.2
NPHP3-203ENST00000465756 MYL6BP14649 208 aa13.8□□□□□ -0.2
NPHP3-203ENST00000465756 MAP3K15Q6ZN16 1313 aa13.8□□□□□ -0.2
NPHP3-203ENST00000465756 KCNQ3O43525 872 aa13.8□□□□□ -0.2
NPHP3-203ENST00000465756 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 E9PSI1 815 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 RIC3Q7Z5B4 369 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
NPHP3-203ENST00000465756 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 SGIP1Q9BQI5 828 aa13.79□□□□□ -0.2
NPHP3-203ENST00000465756 HDAC5Q9UQL6 1122 aa13.78□□□□□ -0.2
NPHP3-203ENST00000465756 FKBP8Q14318 412 aa13.78□□□□□ -0.2
NPHP3-203ENST00000465756 NFIXQ14938 502 aa13.78□□□□□ -0.2
NPHP3-203ENST00000465756 GRIPAP1Q4V328 841 aa13.78□□□□□ -0.2
NPHP3-203ENST00000465756 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-203ENST00000465756 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms