RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	RCAN3	Q9UKA8	241 aa		12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	CNTNAP4	Q9C0A0	1308 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	EP400	Q96L91	3159 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	ILDR2	Q71H61	639 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	LRRC4B	Q9NT99	713 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	CCDC87	Q9NVE4	849 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	HYPK	Q9NX55	129 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	LY75	O60449	1722 aa		12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	TNS1	Q9HBL0	1735 aa	Known RBP	12.37	□□□□□ -0.43
TRIM5-208	ENST00000465634	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	RGPD4	Q7Z3J3	1758 aa		12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	SLC4A2	P04920	1241 aa		12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	CRKL	P46109	303 aa	Known RBP	12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	EN1	Q05925	392 aa	Predicted RBP	12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	LINC00116	Q8NCU8	138 aa		12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	SSH1	Q8WYL5	1049 aa		12.36	□□□□□ -0.43
TRIM5-208	ENST00000465634	A1BG	P04217	495 aa		12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	IL6ST	P40189	918 aa	Predicted RBP	12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	PDIA6	Q15084	440 aa		12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	INTS5	Q6P9B9	1019 aa	Known RBP	12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	NPM2	Q86SE8	214 aa	Known RBP	12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	SMC4	Q9NTJ3	1288 aa		12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	CHPF2	Q9P2E5	772 aa		12.35	□□□□□ -0.43
TRIM5-208	ENST00000465634	IPO8	O15397	1037 aa	Known RBP	12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	RPS6KA4	O75676	772 aa		12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	EZH2	Q15910	746 aa	Known RBP	12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	MRPL50	Q8N5N7	158 aa	Known RBP	12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	ARHGAP45	Q92619	1136 aa		12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	NECTIN2	Q92692	538 aa		12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	KIF16B	Q96L93	1317 aa		12.34	□□□□□ -0.43
TRIM5-208	ENST00000465634	C5	P01031	1676 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634		A0A087WZG4	1122 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	NBPF26	B4DH59	902 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	ADRA2B	P18089	450 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	KCNQ4	P56696	695 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	NBPF14	Q5TI25	921 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	NBPF10	Q6P3W6	841 aa	Known RBP	12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	NBPF15	Q8N660	670 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	AK7	Q96M32	723 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	RTCB	Q9Y3I0	505 aa	Known RBP	12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	TJP1	Q07157	1748 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	PTPRC	P08575	1304 aa		12.33	□□□□□ -0.44
TRIM5-208	ENST00000465634	DDX58	O95786	925 aa	Known RBP	12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	CANX	P27824	592 aa	Known RBP	12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	EIF5	P55010	431 aa	Known RBP	12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	LRP10	Q7Z4F1	713 aa		12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	DEFB132	Q7Z7B7	95 aa		12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	FLAD1	Q8NFF5	587 aa		12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	ZBTB1	Q9Y2K1	713 aa		12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	LAMB4	A4D0S4	1761 aa		12.32	□□□□□ -0.44
TRIM5-208	ENST00000465634	RGL2	O15211	777 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	GNPAT	O15228	680 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	BCAR3	O75815	825 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	MS4A1	P11836	297 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	MYL6B	P14649	208 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	SSFA2	P28290	1259 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	FLII	Q13045	1269 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	AKT1S1	Q96B36	256 aa		12.31	□□□□□ -0.44
TRIM5-208	ENST00000465634	TCERG1	O14776	1098 aa	Known RBP	12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	PROSER3	Q2NL68	480 aa		12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	TRAPPC3L	Q5T215	181 aa		12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	COPS6	Q7L5N1	327 aa		12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	BCL2L13	Q9BXK5	485 aa		12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	API5	Q9BZZ5	524 aa	Known RBP	12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	COL5A3	P25940	1745 aa	Predicted RBP	12.3	□□□□□ -0.44
TRIM5-208	ENST00000465634	C4B	P0C0L5	1744 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	ERVV-1	B6SEH8	477 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	SLC15A2	Q16348	729 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	ZKSCAN2	Q63HK3	967 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	KIF6	Q6ZMV9	814 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	ANKRD13D	Q6ZTN6	518 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	PLBD2	Q8NHP8	589 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	XAGE3	Q8WTP9	111 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	PHAX	Q9H814	394 aa	Known RBP	12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	STK32B	Q9NY57	414 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	TFCP2L1	Q9NZI6	479 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	NOB1	Q9ULX3	412 aa	Known RBP	12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	RREB1	Q92766	1687 aa		12.29	□□□□□ -0.44
TRIM5-208	ENST00000465634	ANXA1	P04083	346 aa		12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	PIP4K2A	P48426	406 aa	Predicted RBP	12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	FKBP5	Q13451	457 aa	Predicted RBP	12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	KSR2	Q6VAB6	950 aa		12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	ATF7IP	Q6VMQ6	1270 aa		12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	G2E3	Q7L622	706 aa		12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	DZIP3	Q86Y13	1208 aa	Known RBP	12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	FRAT1	Q92837	279 aa	Predicted RBP	12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	RNF123	Q5XPI4	1314 aa		12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	COL15A1	P39059	1388 aa		12.28	□□□□□ -0.44
TRIM5-208	ENST00000465634	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	RFC4	P35249	363 aa		12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	AIMP1	Q12904	312 aa	Known RBP	12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	PDE3A	Q14432	1141 aa		12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	CLEC4G	Q6UXB4	293 aa		12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	ARHGEF1	Q92888	912 aa	Known RBP	12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	NARF	Q9UHQ1	456 aa		12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	TAF1L	Q8IZX4	1826 aa		12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	CACNA1F	O60840	1977 aa		12.27	□□□□□ -0.45
TRIM5-208	ENST00000465634	PI4KAP2	A4QPH2	592 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms