RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 SVOPQ8N4V2 548 aa6.79□□□□□ -1.32
XRN1-205ENST00000465507 NBPF15Q8N660 670 aa6.79□□□□□ -1.32
XRN1-205ENST00000465507 FAM200AQ8TCP9 573 aa6.79□□□□□ -1.32
XRN1-205ENST00000465507 RHBDD1Q8TEB9 315 aa6.79□□□□□ -1.32
XRN1-205ENST00000465507 FHDC1Q9C0D6 1143 aaPredicted RBP6.79□□□□□ -1.32
XRN1-205ENST00000465507 TSPAN10Q9H1Z9 355 aaPredicted RBP6.79□□□□□ -1.32
XRN1-205ENST00000465507 CUEDC1Q9NWM3 386 aaPredicted RBP6.79□□□□□ -1.32
XRN1-205ENST00000465507 CARNS1A5YM72 827 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 STK32AQ8WU08 396 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
XRN1-205ENST00000465507 PBXIP1Q96AQ6 731 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 NGLY1Q96IV0 654 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
XRN1-205ENST00000465507 PPP1R12BO60237 982 aaPredicted RBP6.77□□□□□ -1.33
XRN1-205ENST00000465507 PRMT3O60678 531 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 SLURP2P0DP57 97 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 SIX5Q8N196 739 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 KCTD17Q8N5Z5 321 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 PRIMPOLQ96LW4 560 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 RUBCNLQ9H714 662 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 HRH3Q9Y5N1 445 aa6.77□□□□□ -1.33
XRN1-205ENST00000465507 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
XRN1-205ENST00000465507 PPARGC1BQ86YN6 1023 aaKnown RBP6.76□□□□□ -1.33
XRN1-205ENST00000465507 NIFKQ9BYG3 293 aaKnown RBP6.76□□□□□ -1.33
XRN1-205ENST00000465507 ZMIZ1Q9ULJ6 1067 aa6.76□□□□□ -1.33
XRN1-205ENST00000465507 CHMP3Q9Y3E7 222 aa6.76□□□□□ -1.33
XRN1-205ENST00000465507 HCN4Q9Y3Q4 1203 aa6.76□□□□□ -1.33
XRN1-205ENST00000465507 GPR25O00155 361 aa6.75□□□□□ -1.33
XRN1-205ENST00000465507 GAS6Q14393 721 aa6.75□□□□□ -1.33
XRN1-205ENST00000465507 ARSJQ5FYB0 599 aaPredicted RBP6.75□□□□□ -1.33
XRN1-205ENST00000465507 BICDL1Q6ZP65 573 aa6.75□□□□□ -1.33
XRN1-205ENST00000465507 MKNK1Q9BUB5 465 aa6.75□□□□□ -1.33
XRN1-205ENST00000465507 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
XRN1-205ENST00000465507 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
XRN1-205ENST00000465507 SPATA31C2B4DYI2 1134 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 CDK2AP1O14519 115 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 DKK1O94907 266 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 ARHGEF15O94989 841 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 CSB-PGBD3P0DP91 1061 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 MSX1P28360 303 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 TXLNAP40222 546 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 RASSF7Q02833 373 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 TMEM164Q5U3C3 297 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 PGBD3Q8N328 593 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 ZNF837Q96EG3 531 aaPredicted RBP6.74□□□□□ -1.33
XRN1-205ENST00000465507 SLC4A9Q96Q91 983 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 ARXQ96QS3 562 aa6.74□□□□□ -1.33
XRN1-205ENST00000465507 ATAD2Q6PL18 1390 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 SERTM1A2A2V5 107 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
XRN1-205ENST00000465507 TMEM151AQ8N4L1 468 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 ZDHHC1Q8WTX9 485 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 L3MBTL2Q969R5 705 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 VTI1AQ96AJ9 217 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
XRN1-205ENST00000465507 GDF11O95390 407 aa6.72□□□□□ -1.33
XRN1-205ENST00000465507 TATP17735 454 aaPredicted RBP6.72□□□□□ -1.33
XRN1-205ENST00000465507 NOS2P35228 1153 aa6.72□□□□□ -1.33
XRN1-205ENST00000465507 MTFR1Q15390 333 aa6.72□□□□□ -1.33
XRN1-205ENST00000465507 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
XRN1-205ENST00000465507 LYPD4Q6UWN0 246 aa6.72□□□□□ -1.33
XRN1-205ENST00000465507 GTPBP3Q969Y2 492 aaKnown RBP6.72□□□□□ -1.33
XRN1-205ENST00000465507 IQSEC3Q9UPP2 1182 aaPredicted RBP6.72□□□□□ -1.33
XRN1-205ENST00000465507 DYRK1BQ9Y463 629 aa6.72□□□□□ -1.33
XRN1-205ENST00000465507 A0A1B0GTH6 734 aa6.71□□□□□ -1.34
XRN1-205ENST00000465507 ATG7O95352 703 aa6.71□□□□□ -1.34
XRN1-205ENST00000465507 F11P03951 625 aa6.71□□□□□ -1.34
XRN1-205ENST00000465507 EPHA4P54764 986 aa6.71□□□□□ -1.34
XRN1-205ENST00000465507 PSMA6P60900 246 aaKnown RBP6.71□□□□□ -1.34
XRN1-205ENST00000465507 SRPK2P78362 688 aaKnown RBP6.71□□□□□ -1.34
XRN1-205ENST00000465507 SRSF11Q05519 484 aaKnown RBP6.71□□□□□ -1.34
XRN1-205ENST00000465507 RHPN1Q8TCX5 695 aa6.71□□□□□ -1.34
XRN1-205ENST00000465507 NUCKS1Q9H1E3 243 aaKnown RBP6.71□□□□□ -1.34
XRN1-205ENST00000465507 NEUROD4Q9HD90 331 aa6.71□□□□□ -1.34
XRN1-205ENST00000465507 IRS1P35568 1242 aa6.7□□□□□ -1.34
XRN1-205ENST00000465507 FOXK2Q01167 660 aa6.7□□□□□ -1.34
XRN1-205ENST00000465507 DBN1Q16643 649 aa6.7□□□□□ -1.34
XRN1-205ENST00000465507 TRIM22Q8IYM9 498 aa6.7□□□□□ -1.34
XRN1-205ENST00000465507 PHACTR1Q9C0D0 580 aa6.7□□□□□ -1.34
XRN1-205ENST00000465507 M0R2N6 131 aa6.69□□□□□ -1.34
XRN1-205ENST00000465507 C21orf2O43822 256 aa6.69□□□□□ -1.34
XRN1-205ENST00000465507 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 DCDC2BA2VCK2 349 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 H7C1W4 665 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 CELA2BP08218 269 aaPredicted RBP6.68□□□□□ -1.34
XRN1-205ENST00000465507 SCNN1AP37088 669 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 MARSP56192 900 aaKnown RBP6.68□□□□□ -1.34
XRN1-205ENST00000465507 MAP3K10Q02779 954 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 NAA30Q147X3 362 aaPredicted RBP6.68□□□□□ -1.34
XRN1-205ENST00000465507 TEAD4Q15561 434 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 EFHC2Q5JST6 749 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 LRRC69Q6ZNQ3 347 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 KLRG1Q96E93 195 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 HSH2DQ96JZ2 352 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 MBIPQ9NS73 344 aa6.68□□□□□ -1.34
XRN1-205ENST00000465507 EML1O00423 815 aa6.67□□□□□ -1.34
XRN1-205ENST00000465507 PPP1R15AO75807 674 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms