RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	SOS1	Q07889	1333 aa	Predicted RBP	31.6	■■■□□ 2.65
RERE-208	ENST00000465125	ELL2	O00472	640 aa	Predicted RBP	31.6	■■■□□ 2.65
RERE-208	ENST00000465125	USP16	Q9Y5T5	823 aa		31.6	■■■□□ 2.65
RERE-208	ENST00000465125	CNTNAP4	Q9C0A0	1308 aa		31.59	■■■□□ 2.65
RERE-208	ENST00000465125	CRKL	P46109	303 aa	Known RBP	31.59	■■■□□ 2.65
RERE-208	ENST00000465125	TWISTNB	Q3B726	338 aa	Predicted RBP	31.58	■■■□□ 2.65
RERE-208	ENST00000465125	TSPYL6	Q8N831	410 aa		31.58	■■■□□ 2.65
RERE-208	ENST00000465125	AK7	Q96M32	723 aa		31.58	■■■□□ 2.65
RERE-208	ENST00000465125	CCDC87	Q9NVE4	849 aa		31.57	■■■□□ 2.64
RERE-208	ENST00000465125	EIF2S2	P20042	333 aa	Known RBP	31.56	■■■□□ 2.64
RERE-208	ENST00000465125	RC3H1	Q5TC82	1133 aa	Known RBP	31.56	■■■□□ 2.64
RERE-208	ENST00000465125	NBPF14	Q5TI25	921 aa		31.56	■■■□□ 2.64
RERE-208	ENST00000465125	STK32B	Q9NY57	414 aa		31.56	■■■□□ 2.64
RERE-208	ENST00000465125	HDGFL1	Q5TGJ6	251 aa		31.55	■■■□□ 2.64
RERE-208	ENST00000465125	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.55	■■■□□ 2.64
RERE-208	ENST00000465125	ZNF827	Q17R98	1081 aa		31.54	■■■□□ 2.64
RERE-208	ENST00000465125	INTS5	Q6P9B9	1019 aa	Known RBP	31.53	■■■□□ 2.64
RERE-208	ENST00000465125	NECTIN2	Q92692	538 aa		31.53	■■■□□ 2.64
RERE-208	ENST00000465125	AKT1S1	Q96B36	256 aa		31.53	■■■□□ 2.64
RERE-208	ENST00000465125	CHMP4A	Q9BY43	222 aa		31.53	■■■□□ 2.64
RERE-208	ENST00000465125	MYH14	Q7Z406	1995 aa	Known RBP	31.53	■■■□□ 2.64
RERE-208	ENST00000465125	GNPAT	O15228	680 aa		31.52	■■■□□ 2.64
RERE-208	ENST00000465125	A1BG	P04217	495 aa		31.52	■■■□□ 2.64
RERE-208	ENST00000465125	ZBTB1	Q9Y2K1	713 aa		31.52	■■■□□ 2.64
RERE-208	ENST00000465125	ERBB4	Q15303	1308 aa		31.51	■■■□□ 2.64
RERE-208	ENST00000465125	SLC15A2	Q16348	729 aa		31.5	■■■□□ 2.63
RERE-208	ENST00000465125	TFCP2L1	Q9NZI6	479 aa		31.5	■■■□□ 2.63
RERE-208	ENST00000465125	UBR3	Q6ZT12	1888 aa		31.49	■■■□□ 2.63
RERE-208	ENST00000465125	VAMP4	O75379	141 aa		31.49	■■■□□ 2.63
RERE-208	ENST00000465125	CANX	P27824	592 aa	Known RBP	31.49	■■■□□ 2.63
RERE-208	ENST00000465125	TUBGCP6	Q96RT7	1819 aa		31.48	■■■□□ 2.63
RERE-208	ENST00000465125	CCDC30	Q5VVM6	783 aa		31.48	■■■□□ 2.63
RERE-208	ENST00000465125	RTCB	Q9Y3I0	505 aa	Known RBP	31.48	■■■□□ 2.63
RERE-208	ENST00000465125	RPS6KA4	O75676	772 aa		31.47	■■■□□ 2.63
RERE-208	ENST00000465125	PIP4K2A	P48426	406 aa	Predicted RBP	31.47	■■■□□ 2.63
RERE-208	ENST00000465125	CT47B1	P0C2W7	299 aa	Predicted RBP	31.46	■■■□□ 2.63
RERE-208	ENST00000465125	NBPF26	B4DH59	902 aa		31.45	■■■□□ 2.63
RERE-208	ENST00000465125	QSER1	Q2KHR3	1735 aa		31.45	■■■□□ 2.63
RERE-208	ENST00000465125	NBPF10	Q6P3W6	841 aa	Known RBP	31.45	■■■□□ 2.63
RERE-208	ENST00000465125	NBPF15	Q8N660	670 aa		31.45	■■■□□ 2.63
RERE-208	ENST00000465125	CHPF2	Q9P2E5	772 aa		31.45	■■■□□ 2.63
RERE-208	ENST00000465125	PHF14	O94880	888 aa		31.44	■■■□□ 2.62
RERE-208	ENST00000465125	SSFA2	P28290	1259 aa		31.44	■■■□□ 2.62
RERE-208	ENST00000465125	IL6ST	P40189	918 aa	Predicted RBP	31.44	■■■□□ 2.62
RERE-208	ENST00000465125	NPM2	Q86SE8	214 aa	Known RBP	31.44	■■■□□ 2.62
RERE-208	ENST00000465125	STK31	Q9BXU1	1019 aa		31.44	■■■□□ 2.62
RERE-208	ENST00000465125	DBF4	Q9UBU7	674 aa	Predicted RBP	31.44	■■■□□ 2.62
RERE-208	ENST00000465125	ZNF330	Q9Y3S2	320 aa	Predicted RBP	31.44	■■■□□ 2.62
RERE-208	ENST00000465125	MYL6B	P14649	208 aa		31.43	■■■□□ 2.62
RERE-208	ENST00000465125	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.43	■■■□□ 2.62
RERE-208	ENST00000465125	COL15A1	P39059	1388 aa		31.43	■■■□□ 2.62
RERE-208	ENST00000465125	PDIA6	Q15084	440 aa		31.42	■■■□□ 2.62
RERE-208	ENST00000465125	AMIGO3	Q86WK7	504 aa		31.42	■■■□□ 2.62
RERE-208	ENST00000465125	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.41	■■■□□ 2.62
RERE-208	ENST00000465125	ADRA2B	P18089	450 aa		31.41	■■■□□ 2.62
RERE-208	ENST00000465125	EIF5	P55010	431 aa	Known RBP	31.41	■■■□□ 2.62
RERE-208	ENST00000465125	PROSER3	Q2NL68	480 aa		31.41	■■■□□ 2.62
RERE-208	ENST00000465125	FLAD1	Q8NFF5	587 aa		31.41	■■■□□ 2.62
RERE-208	ENST00000465125	ZNF428	Q96B54	188 aa		31.41	■■■□□ 2.62
RERE-208	ENST00000465125	TCERG1	O14776	1098 aa	Known RBP	31.4	■■■□□ 2.62
RERE-208	ENST00000465125	ANXA1	P04083	346 aa		31.4	■■■□□ 2.62
RERE-208	ENST00000465125	SMIM5	Q71RC9	77 aa		31.4	■■■□□ 2.62
RERE-208	ENST00000465125	PNPLA7	Q6ZV29	1317 aa		31.4	■■■□□ 2.62
RERE-208	ENST00000465125	TRAPPC3L	Q5T215	181 aa		31.39	■■■□□ 2.62
RERE-208	ENST00000465125		A0A087WZG4	1122 aa		31.38	■■■□□ 2.61
RERE-208	ENST00000465125	R3HDM1	Q15032	1099 aa	Known RBP	31.38	■■■□□ 2.61
RERE-208	ENST00000465125	HYPK	Q9NX55	129 aa		31.38	■■■□□ 2.61
RERE-208	ENST00000465125	C4A	P0C0L4	1744 aa		31.37	■■■□□ 2.61
RERE-208	ENST00000465125	MSH5	O43196	834 aa		31.36	■■■□□ 2.61
RERE-208	ENST00000465125	LRP10	Q7Z4F1	713 aa		31.35	■■■□□ 2.61
RERE-208	ENST00000465125	ARHGEF1	Q92888	912 aa	Known RBP	31.35	■■■□□ 2.61
RERE-208	ENST00000465125	SLC4A2	P04920	1241 aa		31.34	■■■□□ 2.61
RERE-208	ENST00000465125	RFC4	P35249	363 aa		31.34	■■■□□ 2.61
RERE-208	ENST00000465125	ALDH1L2	Q3SY69	923 aa		31.34	■■■□□ 2.61
RERE-208	ENST00000465125	COL23A1	Q86Y22	540 aa	Predicted RBP	31.34	■■■□□ 2.61
RERE-208	ENST00000465125	ARX	Q96QS3	562 aa		31.34	■■■□□ 2.61
RERE-208	ENST00000465125	PSD	A5PKW4	1024 aa	Predicted RBP	31.33	■■■□□ 2.61
RERE-208	ENST00000465125	DZIP3	Q86Y13	1208 aa	Known RBP	31.33	■■■□□ 2.61
RERE-208	ENST00000465125	CACNA1F	O60840	1977 aa		31.33	■■■□□ 2.61
RERE-208	ENST00000465125	XAGE3	Q8WTP9	111 aa		31.32	■■■□□ 2.6
RERE-208	ENST00000465125	SSH1	Q8WYL5	1049 aa		31.32	■■■□□ 2.6
RERE-208	ENST00000465125	SMC4	Q9NTJ3	1288 aa		31.32	■■■□□ 2.6
RERE-208	ENST00000465125	AIMP1	Q12904	312 aa	Known RBP	31.31	■■■□□ 2.6
RERE-208	ENST00000465125	KIF6	Q6ZMV9	814 aa		31.31	■■■□□ 2.6
RERE-208	ENST00000465125	TBC1D2B	Q9UPU7	963 aa		31.31	■■■□□ 2.6
RERE-208	ENST00000465125	SCN7A	Q01118	1682 aa		31.3	■■■□□ 2.6
RERE-208	ENST00000465125	ZPR1	O75312	459 aa		31.3	■■■□□ 2.6
RERE-208	ENST00000465125	RARS	P54136	660 aa	Known RBP	31.3	■■■□□ 2.6
RERE-208	ENST00000465125	COPS6	Q7L5N1	327 aa		31.3	■■■□□ 2.6
RERE-208	ENST00000465125	BCL2L13	Q9BXK5	485 aa		31.3	■■■□□ 2.6
RERE-208	ENST00000465125	PHAX	Q9H814	394 aa	Known RBP	31.3	■■■□□ 2.6
RERE-208	ENST00000465125	USP42	Q9H9J4	1324 aa	Known RBP	31.29	■■■□□ 2.6
RERE-208	ENST00000465125	TTLL7	Q6ZT98	887 aa		31.29	■■■□□ 2.6
RERE-208	ENST00000465125	NARF	Q9UHQ1	456 aa		31.29	■■■□□ 2.6
RERE-208	ENST00000465125	CASZ1	Q86V15	1759 aa		31.29	■■■□□ 2.6
RERE-208	ENST00000465125	BCOR	Q6W2J9	1755 aa		31.28	■■■□□ 2.6
RERE-208	ENST00000465125	MRPL50	Q8N5N7	158 aa	Known RBP	31.28	■■■□□ 2.6
RERE-208	ENST00000465125	SRP68	Q9UHB9	627 aa	Known RBP	31.27	■■■□□ 2.6
RERE-208	ENST00000465125	FLII	Q13045	1269 aa		31.26	■■■□□ 2.59
RERE-208	ENST00000465125	G2E3	Q7L622	706 aa		31.26	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms