RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 MIS18AQ9NYP9 233 aa16.13■□□□□ 0.17
XRN1-204ENST00000465074 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
XRN1-204ENST00000465074 GYS1P13807 737 aa16.12■□□□□ 0.17
XRN1-204ENST00000465074 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
XRN1-204ENST00000465074 PLEKHF1Q96S99 279 aa16.12■□□□□ 0.17
XRN1-204ENST00000465074 ZBTB1Q9Y2K1 713 aa16.12■□□□□ 0.17
XRN1-204ENST00000465074 HEG1Q9ULI3 1381 aa16.12■□□□□ 0.17
XRN1-204ENST00000465074 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
XRN1-204ENST00000465074 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
XRN1-204ENST00000465074 PRKRIP1Q9H875 184 aaPredicted RBP16.11■□□□□ 0.17
XRN1-204ENST00000465074 CD2APQ9Y5K6 639 aa16.11■□□□□ 0.17
XRN1-204ENST00000465074 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
XRN1-204ENST00000465074 CICQ96RK0 1608 aaPredicted RBP16.11■□□□□ 0.17
XRN1-204ENST00000465074 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
XRN1-204ENST00000465074 FKBP8Q14318 412 aa16.1■□□□□ 0.17
XRN1-204ENST00000465074 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
XRN1-204ENST00000465074 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
XRN1-204ENST00000465074 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
XRN1-204ENST00000465074 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
XRN1-204ENST00000465074 SOS1Q07889 1333 aaPredicted RBP16.1■□□□□ 0.17
XRN1-204ENST00000465074 A1BGP04217 495 aa16.09■□□□□ 0.17
XRN1-204ENST00000465074 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
XRN1-204ENST00000465074 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
XRN1-204ENST00000465074 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
XRN1-204ENST00000465074 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
XRN1-204ENST00000465074 RIPK4P57078 832 aa16.08■□□□□ 0.16
XRN1-204ENST00000465074 COL15A1P39059 1388 aa16.08■□□□□ 0.16
XRN1-204ENST00000465074 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
XRN1-204ENST00000465074 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
XRN1-204ENST00000465074 YBX3P16989 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
XRN1-204ENST00000465074 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
XRN1-204ENST00000465074 NARFQ9UHQ1 456 aa16.06■□□□□ 0.16
XRN1-204ENST00000465074 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
XRN1-204ENST00000465074 ADAMTS8Q9UP79 889 aa16.05■□□□□ 0.16
XRN1-204ENST00000465074 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
XRN1-204ENST00000465074 CHD4Q14839 1912 aa16.05■□□□□ 0.16
XRN1-204ENST00000465074 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
XRN1-204ENST00000465074 A0A087WZG4 1122 aa16.04■□□□□ 0.16
XRN1-204ENST00000465074 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
XRN1-204ENST00000465074 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
XRN1-204ENST00000465074 DDR1Q08345 913 aa16.04■□□□□ 0.16
XRN1-204ENST00000465074 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
XRN1-204ENST00000465074 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
XRN1-204ENST00000465074 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
XRN1-204ENST00000465074 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
XRN1-204ENST00000465074 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
XRN1-204ENST00000465074 IL6STP40189 918 aaPredicted RBP16.02■□□□□ 0.16
XRN1-204ENST00000465074 NGEFQ8N5V2 710 aa16.02■□□□□ 0.16
XRN1-204ENST00000465074 TSPYL4Q9UJ04 414 aa16.02■□□□□ 0.16
XRN1-204ENST00000465074 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
XRN1-204ENST00000465074 DPEP1P16444 411 aa16.01■□□□□ 0.15
XRN1-204ENST00000465074 TM4SF1P30408 202 aa16.01■□□□□ 0.15
XRN1-204ENST00000465074 LMOD3Q0VAK6 560 aa16.01■□□□□ 0.15
XRN1-204ENST00000465074 NFIXQ14938 502 aa16.01■□□□□ 0.15
XRN1-204ENST00000465074 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
XRN1-204ENST00000465074 GOLGB1Q14789 3259 aaKnown RBP16.01■□□□□ 0.15
XRN1-204ENST00000465074 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
XRN1-204ENST00000465074 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
XRN1-204ENST00000465074 BCS1LQ9Y276 419 aa16■□□□□ 0.15
XRN1-204ENST00000465074 KIF13BQ9NQT8 1826 aa16■□□□□ 0.15
XRN1-204ENST00000465074 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
XRN1-204ENST00000465074 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 NPHP1O15259 732 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 ANP32CO43423 234 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 SERPINB2P05120 415 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 EIF4A1P60842 406 aaKnown RBP15.99■□□□□ 0.15
XRN1-204ENST00000465074 TGFB2P61812 414 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 TBC1D9BQ66K14 1250 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
XRN1-204ENST00000465074 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
XRN1-204ENST00000465074 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
XRN1-204ENST00000465074 UTRNP46939 3433 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 NBPF26B4DH59 902 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
XRN1-204ENST00000465074 MYL6BP14649 208 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 CHRNA5P30532 468 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 NBPF10Q6P3W6 841 aaKnown RBP15.97■□□□□ 0.15
XRN1-204ENST00000465074 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 NBPF15Q8N660 670 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 KIAA1551Q9HCM1 1747 aa15.97■□□□□ 0.15
XRN1-204ENST00000465074 SCN7AQ01118 1682 aa15.96■□□□□ 0.15
XRN1-204ENST00000465074 APAF1O14727 1248 aa15.96■□□□□ 0.15
XRN1-204ENST00000465074 CAMTA2O94983 1202 aa15.96■□□□□ 0.15
XRN1-204ENST00000465074 EIF2S2P20042 333 aaKnown RBP15.96■□□□□ 0.15
XRN1-204ENST00000465074 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
XRN1-204ENST00000465074 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
XRN1-204ENST00000465074 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
XRN1-204ENST00000465074 MRS2Q9HD23 443 aa15.95■□□□□ 0.14
XRN1-204ENST00000465074 TRIM35Q9UPQ4 493 aa15.95■□□□□ 0.14
XRN1-204ENST00000465074 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
XRN1-204ENST00000465074 ZNF784Q8NCA9 323 aaPredicted RBP15.94■□□□□ 0.14
XRN1-204ENST00000465074 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
XRN1-204ENST00000465074 BCORQ6W2J9 1755 aa15.93■□□□□ 0.14
XRN1-204ENST00000465074 ZNF652Q9Y2D9 606 aa15.93■□□□□ 0.14
XRN1-204ENST00000465074 KCNA3P22001 575 aa15.92■□□□□ 0.14
XRN1-204ENST00000465074 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
XRN1-204ENST00000465074 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
XRN1-204ENST00000465074 CARMIL3Q8ND23 1372 aa15.91■□□□□ 0.14
XRN1-204ENST00000465074 H0YIN7 160 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms