RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
CLCNKA-204ENST00000464764 MLECQ14165 292 aa15.14■□□□□ 0.01
CLCNKA-204ENST00000464764 USP44Q9H0E7 712 aa15.14■□□□□ 0.01
CLCNKA-204ENST00000464764 SURF6O75683 361 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 UBE2HP62256 183 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 CCDC83Q8IWF9 413 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 IGSF3O75054 1194 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 TTC14Q96N46 770 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 DIP2CQ9Y2E4 1556 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 F13A1P00488 732 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 GNAI3P08754 354 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 TMEM87AQ8NBN3 555 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 SPTLC3Q9NUV7 552 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
CLCNKA-204ENST00000464764 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
CLCNKA-204ENST00000464764 FAM173BQ6P4H8 233 aa15.12■□□□□ 0.01
CLCNKA-204ENST00000464764 FUCA2Q9BTY2 467 aa15.12■□□□□ 0.01
CLCNKA-204ENST00000464764 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-204ENST00000464764 COL9A3Q14050 684 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-204ENST00000464764 CAMK4Q16566 473 aa15.12■□□□□ 0.01
CLCNKA-204ENST00000464764 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 SGSM2O43147 1006 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 CASTP20810 708 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 PPP1R42Q7Z4L9 355 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 KIAA1524Q8TCG1 905 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 LSG1Q9H089 658 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 ADCK5Q3MIX3 580 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 PI4K2BQ8TCG2 481 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 LIMCH1Q9UPQ0 1083 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 GJB2P29033 226 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 DMTNQ08495 405 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 NECAB1Q8N987 351 aa15.11■□□□□ 0.01
CLCNKA-204ENST00000464764 VPS37CA5D8V6 355 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-204ENST00000464764 FERMT3Q86UX7 667 aa15.1■□□□□ 0.01
CLCNKA-204ENST00000464764 RAD50Q92878 1312 aa15.1■□□□□ 0.01
CLCNKA-204ENST00000464764 UBTFL1P0CB47 393 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-204ENST00000464764 ACEP12821 1306 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 MTMR6Q9Y217 621 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 PTH1RQ03431 593 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 RHPN1Q8TCX5 695 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 IL17RAQ96F46 866 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
CLCNKA-204ENST00000464764 PTGS1P23219 599 aa15.08■□□□□ 0.01
CLCNKA-204ENST00000464764 SSH2Q76I76 1423 aa15.08■□□□□ 0
CLCNKA-204ENST00000464764 HYPKQ9NX55 129 aa15.08■□□□□ 0
CLCNKA-204ENST00000464764 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
CLCNKA-204ENST00000464764 LRMPQ12912 555 aa15.08■□□□□ 0
CLCNKA-204ENST00000464764 CCDC30Q5VVM6 783 aa15.08■□□□□ 0
CLCNKA-204ENST00000464764 LUZP1Q86V48 1076 aa15.08■□□□□ 0
CLCNKA-204ENST00000464764 EYA1Q99502 592 aa15.08■□□□□ 0
CLCNKA-204ENST00000464764 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.08■□□□□ 0
CLCNKA-204ENST00000464764 SRGAP3O43295 1099 aa15.07■□□□□ 0
CLCNKA-204ENST00000464764 LETM1O95202 739 aaPredicted RBP15.07■□□□□ 0
CLCNKA-204ENST00000464764 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
CLCNKA-204ENST00000464764 ST3GAL1Q11201 340 aa15.07■□□□□ 0
CLCNKA-204ENST00000464764 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
CLCNKA-204ENST00000464764 CKAP2LQ8IYA6 745 aa15.07■□□□□ 0
CLCNKA-204ENST00000464764 PDCL2Q8N4E4 241 aa15.07■□□□□ 0
CLCNKA-204ENST00000464764 JAKMIP1Q96N16 626 aaKnown RBP15.07■□□□□ 0
CLCNKA-204ENST00000464764 NRBP1Q9UHY1 535 aa15.07■□□□□ 0
CLCNKA-204ENST00000464764 LIG1P18858 919 aa15.06■□□□□ 0
CLCNKA-204ENST00000464764 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
CLCNKA-204ENST00000464764 SSH3Q8TE77 659 aa15.06■□□□□ 0
CLCNKA-204ENST00000464764 TCEANC2Q96MN5 208 aa15.06■□□□□ 0
CLCNKA-204ENST00000464764 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
CLCNKA-204ENST00000464764 ME3Q16798 604 aa15.05■□□□□ 0
CLCNKA-204ENST00000464764 TTC6Q86TZ1 520 aa15.05■□□□□ 0
CLCNKA-204ENST00000464764 PDRG1Q9NUG6 133 aa15.05■□□□□ 0
CLCNKA-204ENST00000464764 A2ML1A8K2U0 1454 aa15.05■□□□□ -0
CLCNKA-204ENST00000464764 DLC1Q96QB1 1528 aa15.05■□□□□ -0
CLCNKA-204ENST00000464764 ANXA1P04083 346 aa15.05■□□□□ -0
CLCNKA-204ENST00000464764 TFIP11Q9UBB9 837 aaKnown RBP15.05■□□□□ -0
CLCNKA-204ENST00000464764 CCDC186Q7Z3E2 898 aa15.04■□□□□ -0
CLCNKA-204ENST00000464764 IL17REQ8NFR9 667 aa15.04■□□□□ -0
CLCNKA-204ENST00000464764 RIMS1Q86UR5 1692 aaKnown RBP15.04■□□□□ -0
CLCNKA-204ENST00000464764 CNTROBQ8N137 903 aa15.04■□□□□ -0
CLCNKA-204ENST00000464764 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
CLCNKA-204ENST00000464764 C16orf45Q96MC5 204 aaPredicted RBP15.03■□□□□ -0
CLCNKA-204ENST00000464764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
CLCNKA-204ENST00000464764 CCDC192P0DO97 292 aa15.03■□□□□ -0
CLCNKA-204ENST00000464764 NUTM2GQ5VZR2 741 aa15.03■□□□□ -0
CLCNKA-204ENST00000464764 CDC37L1Q7L3B6 337 aa15.03■□□□□ -0
CLCNKA-204ENST00000464764 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
CLCNKA-204ENST00000464764 AMPHP49418 695 aa15.03■□□□□ -0
CLCNKA-204ENST00000464764 UTP14CQ5TAP6 766 aaKnown RBP15.03■□□□□ -0
CLCNKA-204ENST00000464764 MRVI1Q9Y6F6 885 aa15.03■□□□□ -0
CLCNKA-204ENST00000464764 CHAF1AQ13111 956 aaPredicted RBP15.02■□□□□ -0
CLCNKA-204ENST00000464764 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
CLCNKA-204ENST00000464764 DRC7Q8IY82 874 aa15.02■□□□□ -0
CLCNKA-204ENST00000464764 TPCN1Q9ULQ1 816 aa15.02■□□□□ -0
CLCNKA-204ENST00000464764 TUBGCP6Q96RT7 1819 aa15.02□□□□□ -0.01
CLCNKA-204ENST00000464764 OS9Q13438 667 aaPredicted RBP15.02□□□□□ -0.01
CLCNKA-204ENST00000464764 LARP1BQ659C4 914 aaKnown RBP15.02□□□□□ -0.01
CLCNKA-204ENST00000464764 DIAPH3Q9NSV4 1193 aa15.02□□□□□ -0.01
CLCNKA-204ENST00000464764 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms