RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
USP25-207ENST00000464435 MSX1P28360 303 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 CLDN10P78369 228 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 OGFOD1Q8N543 542 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP25-207ENST00000464435 MBIPQ9NS73 344 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 ZDHHC3Q9NYG2 299 aa8.89□□□□□ -0.99
USP25-207ENST00000464435 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
USP25-207ENST00000464435 GTPBP3Q969Y2 492 aaKnown RBP8.88□□□□□ -0.99
USP25-207ENST00000464435 PLA2G4AP47712 749 aa8.87□□□□□ -0.99
USP25-207ENST00000464435 EPHA4P54764 986 aa8.87□□□□□ -0.99
USP25-207ENST00000464435 FOXK2Q01167 660 aa8.87□□□□□ -0.99
USP25-207ENST00000464435 GAS6Q14393 721 aa8.87□□□□□ -0.99
USP25-207ENST00000464435 NSFL1CQ9UNZ2 370 aaKnown RBP8.87□□□□□ -0.99
USP25-207ENST00000464435 IGHA1P01876 353 aa8.86□□□□□ -0.99
USP25-207ENST00000464435 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
USP25-207ENST00000464435 TEAD4Q15561 434 aa8.86□□□□□ -0.99
USP25-207ENST00000464435 FIGNL1Q6PIW4 674 aa8.86□□□□□ -0.99
USP25-207ENST00000464435 NLRP8Q86W28 1048 aa8.86□□□□□ -0.99
USP25-207ENST00000464435 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
USP25-207ENST00000464435 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
USP25-207ENST00000464435 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
USP25-207ENST00000464435 RASA1P20936 1047 aa8.85□□□□□ -0.99
USP25-207ENST00000464435 KANK3Q6NY19 840 aa8.85□□□□□ -0.99
USP25-207ENST00000464435 LARP1Q6PKG0 1096 aaKnown RBP8.85□□□□□ -0.99
USP25-207ENST00000464435 KIAA1024Q9UPX6 916 aa8.85□□□□□ -0.99
USP25-207ENST00000464435 GPC6Q9Y625 555 aaPredicted RBP8.85□□□□□ -0.99
USP25-207ENST00000464435 ADAMTS2O95450 1211 aa8.84□□□□□ -0.99
USP25-207ENST00000464435 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
USP25-207ENST00000464435 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
USP25-207ENST00000464435 RUBCNLQ9H714 662 aa8.84□□□□□ -0.99
USP25-207ENST00000464435 VRTNQ9H8Y1 702 aa8.84□□□□□ -0.99
USP25-207ENST00000464435 ATXN7L1Q9ULK2 861 aaPredicted RBP8.84□□□□□ -0.99
USP25-207ENST00000464435 FAM196BA6NMK8 535 aa8.83□□□□□ -1
USP25-207ENST00000464435 DKK1O94907 266 aa8.83□□□□□ -1
USP25-207ENST00000464435 MX2P20592 715 aa8.83□□□□□ -1
USP25-207ENST00000464435 ATP4AP20648 1035 aa8.83□□□□□ -1
USP25-207ENST00000464435 SEC13P55735 322 aa8.83□□□□□ -1
USP25-207ENST00000464435 UBAP2LQ14157 1087 aaKnown RBP8.83□□□□□ -1
USP25-207ENST00000464435 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
USP25-207ENST00000464435 LRRC4BQ9NT99 713 aa8.83□□□□□ -1
USP25-207ENST00000464435 CHMP3Q9Y3E7 222 aa8.83□□□□□ -1
USP25-207ENST00000464435 GPR25O00155 361 aa8.82□□□□□ -1
USP25-207ENST00000464435 THBS1P07996 1170 aa8.82□□□□□ -1
USP25-207ENST00000464435 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
USP25-207ENST00000464435 NOS2P35228 1153 aa8.82□□□□□ -1
USP25-207ENST00000464435 MAP2K3P46734 347 aa8.82□□□□□ -1
USP25-207ENST00000464435 PSMA6P60900 246 aaKnown RBP8.82□□□□□ -1
USP25-207ENST00000464435 LYPD4Q6UWN0 246 aa8.82□□□□□ -1
USP25-207ENST00000464435 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
USP25-207ENST00000464435 TNS4Q8IZW8 715 aa8.82□□□□□ -1
USP25-207ENST00000464435 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
USP25-207ENST00000464435 USP3Q9Y6I4 520 aa8.82□□□□□ -1
USP25-207ENST00000464435 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
USP25-207ENST00000464435 POTEAQ6S8J7 498 aa8.81□□□□□ -1
USP25-207ENST00000464435 STAG2Q8N3U4 1231 aa8.81□□□□□ -1
USP25-207ENST00000464435 L3MBTL2Q969R5 705 aa8.81□□□□□ -1
USP25-207ENST00000464435 ZNF594Q96JF6 807 aaPredicted RBP8.81□□□□□ -1
USP25-207ENST00000464435 PCDHGC4Q9Y5F7 938 aa8.81□□□□□ -1
USP25-207ENST00000464435 IGF1RP08069 1367 aa8.81□□□□□ -1
USP25-207ENST00000464435 SERTM1A2A2V5 107 aa8.8□□□□□ -1
USP25-207ENST00000464435 PTK7Q13308 1070 aa8.8□□□□□ -1
USP25-207ENST00000464435 ARSJQ5FYB0 599 aaPredicted RBP8.8□□□□□ -1
USP25-207ENST00000464435 XP32Q5T750 250 aa8.8□□□□□ -1
USP25-207ENST00000464435 NDFIP2Q9NV92 336 aa8.8□□□□□ -1
USP25-207ENST00000464435 A0A1W2PNR3 127 aa8.79□□□□□ -1
USP25-207ENST00000464435 MAP3K10Q02779 954 aa8.79□□□□□ -1
USP25-207ENST00000464435 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
USP25-207ENST00000464435 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
USP25-207ENST00000464435 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
USP25-207ENST00000464435 ZIC5Q96T25 663 aa8.79□□□□□ -1
USP25-207ENST00000464435 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
USP25-207ENST00000464435 ENAMQ9NRM1 1142 aa8.79□□□□□ -1
USP25-207ENST00000464435 SFI1A8K8P3 1242 aa8.78□□□□□ -1
USP25-207ENST00000464435 EML1O00423 815 aa8.78□□□□□ -1
USP25-207ENST00000464435 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
USP25-207ENST00000464435 ZDHHC1Q8WTX9 485 aa8.78□□□□□ -1
USP25-207ENST00000464435 USP17L15C9J2P7 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L10C9JJH3 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L13C9JLJ4 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L12C9JPN9 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L11C9JVI0 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L21D6R901 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L18D6R9N7 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L22D6RA61 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L17D6RBQ6 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L19D6RCP7 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L20D6RJB6 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 USP17L24Q0WX57 530 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 CRTC2Q53ET0 693 aaPredicted RBP8.77□□□□□ -1.01
USP25-207ENST00000464435 BICDL1Q6ZP65 573 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 TSEN2Q8NCE0 465 aaKnown RBP8.77□□□□□ -1.01
USP25-207ENST00000464435 TSPAN10Q9H1Z9 355 aaPredicted RBP8.77□□□□□ -1.01
USP25-207ENST00000464435 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 GJA3Q9Y6H8 435 aa8.77□□□□□ -1.01
USP25-207ENST00000464435 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms