RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 ZNF526Q8TF50 670 aaPredicted RBP9.83□□□□□ -0.84
THUMPD3-208ENST00000464045 FMNL2Q96PY5 1086 aa9.83□□□□□ -0.84
THUMPD3-208ENST00000464045 SIPA1L3O60292 1781 aaPredicted RBP9.83□□□□□ -0.84
THUMPD3-208ENST00000464045 UBR2Q8IWV8 1755 aa9.83□□□□□ -0.84
THUMPD3-208ENST00000464045 TJP1Q07157 1748 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 STARD3NLO95772 234 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 CYP19A1P11511 503 aaPredicted RBP9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 LMOD3Q0VAK6 560 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 INTS5Q6P9B9 1019 aaKnown RBP9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 MCM10Q7L590 875 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 DNAJC10Q8IXB1 793 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 CCDC87Q9NVE4 849 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 HEG1Q9ULI3 1381 aa9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 VIRMAQ69YN4 1812 aaKnown RBP9.82□□□□□ -0.84
THUMPD3-208ENST00000464045 RFC4P35249 363 aa9.81□□□□□ -0.84
THUMPD3-208ENST00000464045 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
THUMPD3-208ENST00000464045 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
THUMPD3-208ENST00000464045 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
THUMPD3-208ENST00000464045 SOS1Q07889 1333 aaPredicted RBP9.81□□□□□ -0.84
THUMPD3-208ENST00000464045 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
THUMPD3-208ENST00000464045 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
THUMPD3-208ENST00000464045 SNRPA1P09661 255 aaKnown RBP9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 GYS1P13807 737 aa9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 TMPOP42166 694 aaKnown RBP9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 DCTN1Q14203 1278 aa9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 BABAM1Q9NWV8 329 aa9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 USP42Q9H9J4 1324 aaKnown RBP9.79□□□□□ -0.84
THUMPD3-208ENST00000464045 COL15A1P39059 1388 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 MYH14Q7Z406 1995 aaKnown RBP9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 A0A087WZG4 1122 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 ANP32CO43423 234 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 RIPK4P57078 832 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 ATP10DQ9P241 1426 aa9.78□□□□□ -0.84
THUMPD3-208ENST00000464045 KCNQ3O43525 872 aa9.77□□□□□ -0.85
THUMPD3-208ENST00000464045 ZPR1O75312 459 aa9.77□□□□□ -0.85
THUMPD3-208ENST00000464045 MMP10P09238 476 aa9.77□□□□□ -0.85
THUMPD3-208ENST00000464045 IL6STP40189 918 aaPredicted RBP9.77□□□□□ -0.85
THUMPD3-208ENST00000464045 EIF5P55010 431 aaKnown RBP9.77□□□□□ -0.85
THUMPD3-208ENST00000464045 NARFQ9UHQ1 456 aa9.77□□□□□ -0.85
THUMPD3-208ENST00000464045 C4AP0C0L4 1744 aa9.76□□□□□ -0.85
THUMPD3-208ENST00000464045 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
THUMPD3-208ENST00000464045 CCDC146Q8IYE0 955 aa9.76□□□□□ -0.85
THUMPD3-208ENST00000464045 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
THUMPD3-208ENST00000464045 RGL2O15211 777 aa9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 EIF4A1P60842 406 aaKnown RBP9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 FKBP8Q14318 412 aa9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 NPM2Q86SE8 214 aaKnown RBP9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 GPBP1L1Q9HC44 474 aaPredicted RBP9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 SRP68Q9UHB9 627 aaKnown RBP9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 DLG5Q8TDM6 1919 aa9.75□□□□□ -0.85
THUMPD3-208ENST00000464045 C10orf71Q711Q0 1435 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 KDM3BQ7LBC6 1761 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 A1BGP04217 495 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 TM4SF1P30408 202 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 USPL1Q5W0Q7 1092 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 MIS18AQ9NYP9 233 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 TSPYL4Q9UJ04 414 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 TRIM35Q9UPQ4 493 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 USP16Q9Y5T5 823 aa9.74□□□□□ -0.85
THUMPD3-208ENST00000464045 TGFB2P61812 414 aa9.73□□□□□ -0.85
THUMPD3-208ENST00000464045 CALD1Q05682 793 aaKnown RBP9.73□□□□□ -0.85
THUMPD3-208ENST00000464045 SP7Q8TDD2 431 aaPredicted RBP9.73□□□□□ -0.85
THUMPD3-208ENST00000464045 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
THUMPD3-208ENST00000464045 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
THUMPD3-208ENST00000464045 PRAMEF22A3QJZ6 481 aa9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 POLRMTO00411 1230 aaKnown RBP9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 CHL1O00533 1208 aa9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 DDR1Q08345 913 aa9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 BCL2L12Q9HB09 334 aa9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 MRS2Q9HD23 443 aa9.72□□□□□ -0.85
THUMPD3-208ENST00000464045 LAMB4A4D0S4 1761 aa9.71□□□□□ -0.85
THUMPD3-208ENST00000464045 KIF13BQ9NQT8 1826 aa9.71□□□□□ -0.85
THUMPD3-208ENST00000464045 APAF1O14727 1248 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 CAMTA2O94983 1202 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 NFIXQ14938 502 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 CCDC184Q52MB2 194 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 CLEC4GQ6UXB4 293 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 CFAP44Q96MT7 982 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 ZNF652Q9Y2D9 606 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 ZNF330Q9Y3S2 320 aaPredicted RBP9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 SCN7AQ01118 1682 aa9.71□□□□□ -0.86
THUMPD3-208ENST00000464045 A0A0G2JLW4 131 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 ZBTB22O15209 634 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 HOXB7P09629 217 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 DSG3P32926 999 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 CCDC27Q2M243 656 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 RNF216Q9NWF9 866 aaPredicted RBP9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
THUMPD3-208ENST00000464045 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms