RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
HERC4-208ENST00000463478 GTF3C2Q8WUA4 911 aaPredicted RBP7.7□□□□□ -1.18
HERC4-208ENST00000463478 C2orf49Q9BVC5 232 aaPredicted RBP7.7□□□□□ -1.18
HERC4-208ENST00000463478 H3BRB1 525 aa7.69□□□□□ -1.18
HERC4-208ENST00000463478 SPINT1O43278 529 aa7.69□□□□□ -1.18
HERC4-208ENST00000463478 CCDC27Q2M243 656 aa7.69□□□□□ -1.18
HERC4-208ENST00000463478 COL26A1Q96A83 441 aa7.69□□□□□ -1.18
HERC4-208ENST00000463478 TUT1Q9H6E5 874 aaKnown RBP7.69□□□□□ -1.18
HERC4-208ENST00000463478 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.69□□□□□ -1.18
HERC4-208ENST00000463478 BIN2Q9UBW5 565 aaPredicted RBP7.69□□□□□ -1.18
HERC4-208ENST00000463478 ZNF232Q9UNY5 417 aa7.69□□□□□ -1.18
HERC4-208ENST00000463478 SERTM1A2A2V5 107 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 AXIN1O15169 862 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 GPC1P35052 558 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 CTSOP43234 321 aaPredicted RBP7.68□□□□□ -1.18
HERC4-208ENST00000463478 MTMR3Q13615 1198 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 GNASQ5JWF2 1037 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 SH3PXD2AQ5TCZ1 1133 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 MRPL14Q6P1L8 145 aaKnown RBP7.68□□□□□ -1.18
HERC4-208ENST00000463478 PPARGC1BQ86YN6 1023 aaKnown RBP7.68□□□□□ -1.18
HERC4-208ENST00000463478 STAG2Q8N3U4 1231 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 NGLY1Q96IV0 654 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 EGFL7Q9UHF1 273 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
HERC4-208ENST00000463478 DNMT3AQ9Y6K1 912 aaPredicted RBP7.68□□□□□ -1.18
HERC4-208ENST00000463478 BMP1P13497 986 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 NOS2P35228 1153 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 RNF144AP50876 292 aaPredicted RBP7.67□□□□□ -1.18
HERC4-208ENST00000463478 TEAD4Q15561 434 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 FOXD4L5Q5VV16 416 aaPredicted RBP7.67□□□□□ -1.18
HERC4-208ENST00000463478 GLYCTKQ8IVS8 523 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 RHBDD1Q8TEB9 315 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 ZDHHC1Q8WTX9 485 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 NIFKQ9BYG3 293 aaKnown RBP7.67□□□□□ -1.18
HERC4-208ENST00000463478 GRIP2Q9C0E4 1043 aa7.67□□□□□ -1.18
HERC4-208ENST00000463478 EML1O00423 815 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 ICMTO60725 284 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 PLA2G4AP47712 749 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 C16orf46Q6P387 395 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 HELQQ8TDG4 1101 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 L3MBTL2Q969R5 705 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 SAP130Q9H0E3 1048 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 HCN4Q9Y3Q4 1203 aa7.66□□□□□ -1.18
HERC4-208ENST00000463478 POTECB2RU33 542 aa7.65□□□□□ -1.18
HERC4-208ENST00000463478 SCARF1Q14162 830 aa7.65□□□□□ -1.18
HERC4-208ENST00000463478 ZNF295-AS1Q8N0V1 137 aa7.65□□□□□ -1.18
HERC4-208ENST00000463478 DACH1Q9UI36 760 aa7.65□□□□□ -1.18
HERC4-208ENST00000463478 PHKA2P46019 1235 aa7.64□□□□□ -1.19
HERC4-208ENST00000463478 FKBP4Q02790 459 aaKnown RBP eCLIP7.64□□□□□ -1.19
HERC4-208ENST00000463478 SF3B2Q13435 895 aaKnown RBP7.64□□□□□ -1.19
HERC4-208ENST00000463478 C4orf17Q53FE4 359 aa7.64□□□□□ -1.19
HERC4-208ENST00000463478 PRICKLE2Q7Z3G6 844 aa7.64□□□□□ -1.19
HERC4-208ENST00000463478 RNF217Q8TC41 542 aa7.64□□□□□ -1.19
HERC4-208ENST00000463478 ZNF775Q96BV0 537 aaPredicted RBP7.64□□□□□ -1.19
HERC4-208ENST00000463478 QTRT2Q9H974 415 aaKnown RBP7.64□□□□□ -1.19
HERC4-208ENST00000463478 HIRAP54198 1017 aaPredicted RBP7.63□□□□□ -1.19
HERC4-208ENST00000463478 COX20Q5RI15 118 aa7.63□□□□□ -1.19
HERC4-208ENST00000463478 POTEAQ6S8J7 498 aa7.63□□□□□ -1.19
HERC4-208ENST00000463478 TRIM46Q7Z4K8 759 aa7.63□□□□□ -1.19
HERC4-208ENST00000463478 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
HERC4-208ENST00000463478 AIDAQ96BJ3 306 aa7.63□□□□□ -1.19
HERC4-208ENST00000463478 PHACTR1Q9C0D0 580 aa7.63□□□□□ -1.19
HERC4-208ENST00000463478 FIGNL2A6NMB9 653 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 TTLL8A6PVC2 850 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 MPSTP25325 297 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 TXLNAP40222 546 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 POU4F2Q12837 409 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 LYSMD3Q7Z3D4 306 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 LRFN2Q9ULH4 789 aa7.62□□□□□ -1.19
HERC4-208ENST00000463478 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 RHOQP17081 205 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 NBPF1Q3BBV0 1214 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 RGS22Q8NE09 1264 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 MYO19Q96H55 970 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 ZFP42Q96MM3 310 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 ATP13A2Q9NQ11 1180 aa7.61□□□□□ -1.19
HERC4-208ENST00000463478 GMPR2Q9P2T1 348 aaKnown RBP7.61□□□□□ -1.19
HERC4-208ENST00000463478 TNFRSF10BO14763 440 aa7.6□□□□□ -1.19
HERC4-208ENST00000463478 FAM13AO94988 1023 aa7.6□□□□□ -1.19
HERC4-208ENST00000463478 MARSP56192 900 aaKnown RBP7.6□□□□□ -1.19
HERC4-208ENST00000463478 DGKZQ13574 1117 aa7.6□□□□□ -1.19
HERC4-208ENST00000463478 RTN1Q16799 776 aa7.6□□□□□ -1.19
HERC4-208ENST00000463478 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
HERC4-208ENST00000463478 KLK14Q9P0G3 267 aa7.6□□□□□ -1.19
HERC4-208ENST00000463478 STIM2Q9P246 746 aa7.6□□□□□ -1.19
HERC4-208ENST00000463478 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
HERC4-208ENST00000463478 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
HERC4-208ENST00000463478 TATP17735 454 aaPredicted RBP7.59□□□□□ -1.19
HERC4-208ENST00000463478 RHPN1Q8TCX5 695 aa7.59□□□□□ -1.19
HERC4-208ENST00000463478 FOXD4L4Q8WXT5 416 aaPredicted RBP7.59□□□□□ -1.19
HERC4-208ENST00000463478 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
HERC4-208ENST00000463478 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
HERC4-208ENST00000463478 MAPK1P28482 360 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 ARHGAP4P98171 946 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 AAMPQ13685 434 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 ECM1Q16610 540 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 C11orf91Q3C1V1 193 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 ABTB2Q8N961 1025 aa7.58□□□□□ -1.2
HERC4-208ENST00000463478 TIMMDC1Q9NPL8 285 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms