RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
SEMA3D-203ENST00000463315 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
SEMA3D-203ENST00000463315 PDGFDQ9GZP0 370 aaPredicted RBP17.99■□□□□ 0.47
SEMA3D-203ENST00000463315 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
SEMA3D-203ENST00000463315 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 APAF1O14727 1248 aa17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 GNPATO15228 680 aa17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 CALD1Q05682 793 aaKnown RBP17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 UBR3Q6ZT12 1888 aa17.98■□□□□ 0.47
SEMA3D-203ENST00000463315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
SEMA3D-203ENST00000463315 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
SEMA3D-203ENST00000463315 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
SEMA3D-203ENST00000463315 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
SEMA3D-203ENST00000463315 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
SEMA3D-203ENST00000463315 TUBGCP6Q96RT7 1819 aa17.97■□□□□ 0.47
SEMA3D-203ENST00000463315 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
SEMA3D-203ENST00000463315 TRAPPC3LQ5T215 181 aa17.96■□□□□ 0.47
SEMA3D-203ENST00000463315 INTS5Q6P9B9 1019 aaKnown RBP17.96■□□□□ 0.47
SEMA3D-203ENST00000463315 THUMPD2Q9BTF0 503 aaKnown RBP17.96■□□□□ 0.47
SEMA3D-203ENST00000463315 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
SEMA3D-203ENST00000463315 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
SEMA3D-203ENST00000463315 CHL1O00533 1208 aa17.94■□□□□ 0.46
SEMA3D-203ENST00000463315 KCNQ3O43525 872 aa17.94■□□□□ 0.46
SEMA3D-203ENST00000463315 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
SEMA3D-203ENST00000463315 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
SEMA3D-203ENST00000463315 COL24A1Q17RW2 1714 aa17.94■□□□□ 0.46
SEMA3D-203ENST00000463315 KDM3BQ7LBC6 1761 aa17.94■□□□□ 0.46
SEMA3D-203ENST00000463315 PTGER2P43116 358 aa17.93■□□□□ 0.46
SEMA3D-203ENST00000463315 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
SEMA3D-203ENST00000463315 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
SEMA3D-203ENST00000463315 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
SEMA3D-203ENST00000463315 TSPYL4Q9UJ04 414 aa17.93■□□□□ 0.46
SEMA3D-203ENST00000463315 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
SEMA3D-203ENST00000463315 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
SEMA3D-203ENST00000463315 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
SEMA3D-203ENST00000463315 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
SEMA3D-203ENST00000463315 PHF14O94880 888 aa17.91■□□□□ 0.46
SEMA3D-203ENST00000463315 POLD1P28340 1107 aa17.91■□□□□ 0.46
SEMA3D-203ENST00000463315 RFC4P35249 363 aa17.91■□□□□ 0.46
SEMA3D-203ENST00000463315 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
SEMA3D-203ENST00000463315 ZNF853P0CG23 659 aa17.9■□□□□ 0.46
SEMA3D-203ENST00000463315 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
SEMA3D-203ENST00000463315 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
SEMA3D-203ENST00000463315 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
SEMA3D-203ENST00000463315 A0A087WZG4 1122 aa17.89■□□□□ 0.45
SEMA3D-203ENST00000463315 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.45
SEMA3D-203ENST00000463315 GNAI1P63096 354 aa17.89■□□□□ 0.45
SEMA3D-203ENST00000463315 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
SEMA3D-203ENST00000463315 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
SEMA3D-203ENST00000463315 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
SEMA3D-203ENST00000463315 PPP1R1BQ9UD71 204 aaPredicted RBP17.88■□□□□ 0.45
SEMA3D-203ENST00000463315 IL16Q14005 1332 aa17.88■□□□□ 0.45
SEMA3D-203ENST00000463315 HOXB7P09629 217 aa17.87■□□□□ 0.45
SEMA3D-203ENST00000463315 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
SEMA3D-203ENST00000463315 ARXQ96QS3 562 aa17.87■□□□□ 0.45
SEMA3D-203ENST00000463315 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
SEMA3D-203ENST00000463315 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
SEMA3D-203ENST00000463315 COL15A1P39059 1388 aa17.87■□□□□ 0.45
SEMA3D-203ENST00000463315 RGL2O15211 777 aa17.86■□□□□ 0.45
SEMA3D-203ENST00000463315 GYS1P13807 737 aa17.86■□□□□ 0.45
SEMA3D-203ENST00000463315 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
SEMA3D-203ENST00000463315 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
SEMA3D-203ENST00000463315 ZPR1O75312 459 aa17.85■□□□□ 0.45
SEMA3D-203ENST00000463315 A1BGP04217 495 aa17.85■□□□□ 0.45
SEMA3D-203ENST00000463315 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
SEMA3D-203ENST00000463315 SMIM5Q71RC9 77 aa17.85■□□□□ 0.45
SEMA3D-203ENST00000463315 WDR63Q8IWG1 891 aa17.85■□□□□ 0.45
SEMA3D-203ENST00000463315 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
SEMA3D-203ENST00000463315 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
SEMA3D-203ENST00000463315 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
SEMA3D-203ENST00000463315 PRAMEF22A3QJZ6 481 aa17.84■□□□□ 0.45
SEMA3D-203ENST00000463315 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
SEMA3D-203ENST00000463315 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
SEMA3D-203ENST00000463315 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
SEMA3D-203ENST00000463315 NBPF26B4DH59 902 aa17.81■□□□□ 0.44
SEMA3D-203ENST00000463315 NBPF10Q6P3W6 841 aaKnown RBP17.81■□□□□ 0.44
SEMA3D-203ENST00000463315 NBPF15Q8N660 670 aa17.81■□□□□ 0.44
SEMA3D-203ENST00000463315 USPL1Q5W0Q7 1092 aa17.8■□□□□ 0.44
SEMA3D-203ENST00000463315 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
SEMA3D-203ENST00000463315 MIER1Q8N108 512 aa17.8■□□□□ 0.44
SEMA3D-203ENST00000463315 MMP10P09238 476 aa17.79■□□□□ 0.44
SEMA3D-203ENST00000463315 TM4SF1P30408 202 aa17.79■□□□□ 0.44
SEMA3D-203ENST00000463315 SRP68Q9UHB9 627 aaKnown RBP17.79■□□□□ 0.44
SEMA3D-203ENST00000463315 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
SEMA3D-203ENST00000463315 FKBP8Q14318 412 aa17.78■□□□□ 0.44
SEMA3D-203ENST00000463315 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
SEMA3D-203ENST00000463315 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
SEMA3D-203ENST00000463315 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
SEMA3D-203ENST00000463315 ZNF521Q96K83 1311 aa17.77■□□□□ 0.44
SEMA3D-203ENST00000463315 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
SEMA3D-203ENST00000463315 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.44
SEMA3D-203ENST00000463315 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.44
SEMA3D-203ENST00000463315 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
SEMA3D-203ENST00000463315 CAMTA2O94983 1202 aa17.76■□□□□ 0.43
SEMA3D-203ENST00000463315 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
SEMA3D-203ENST00000463315 TBC1D2BQ9UPU7 963 aa17.76■□□□□ 0.43
SEMA3D-203ENST00000463315 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
SEMA3D-203ENST00000463315 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms