RNA–Protein interactions for RNA: ENST00000463194.1

RFC2-203, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-203ENST00000463194 LMOD3Q0VAK6 560 aa25.6■■□□□ 1.69
RFC2-203ENST00000463194 ZBTB1Q9Y2K1 713 aa25.6■■□□□ 1.69
RFC2-203ENST00000463194 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
RFC2-203ENST00000463194 DCAF8L1A6NGE4 600 aa25.58■■□□□ 1.69
RFC2-203ENST00000463194 SNRPA1P09661 255 aaKnown RBP25.58■■□□□ 1.69
RFC2-203ENST00000463194 THUMPD2Q9BTF0 503 aaKnown RBP25.58■■□□□ 1.69
RFC2-203ENST00000463194 CD2APQ9Y5K6 639 aa25.58■■□□□ 1.69
RFC2-203ENST00000463194 USP42Q9H9J4 1324 aaKnown RBP25.58■■□□□ 1.69
RFC2-203ENST00000463194 EIF5P55010 431 aaKnown RBP25.56■■□□□ 1.68
RFC2-203ENST00000463194 MIS18AQ9NYP9 233 aa25.56■■□□□ 1.68
RFC2-203ENST00000463194 MMP10P09238 476 aa25.55■■□□□ 1.68
RFC2-203ENST00000463194 CANXP27824 592 aaKnown RBP25.55■■□□□ 1.68
RFC2-203ENST00000463194 BABAM1Q9NWV8 329 aa25.55■■□□□ 1.68
RFC2-203ENST00000463194 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
RFC2-203ENST00000463194 USP16Q9Y5T5 823 aa25.55■■□□□ 1.68
RFC2-203ENST00000463194 COL15A1P39059 1388 aa25.55■■□□□ 1.68
RFC2-203ENST00000463194 C4AP0C0L4 1744 aa25.54■■□□□ 1.68
RFC2-203ENST00000463194 ZPR1O75312 459 aa25.54■■□□□ 1.68
RFC2-203ENST00000463194 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
RFC2-203ENST00000463194 KLHL34Q8N239 644 aa25.54■■□□□ 1.68
RFC2-203ENST00000463194 NARFQ9UHQ1 456 aa25.54■■□□□ 1.68
RFC2-203ENST00000463194 A0A087WZG4 1122 aa25.53■■□□□ 1.68
RFC2-203ENST00000463194 IL6STP40189 918 aaPredicted RBP25.53■■□□□ 1.68
RFC2-203ENST00000463194 RRP7AQ9Y3A4 280 aaKnown RBP25.53■■□□□ 1.68
RFC2-203ENST00000463194 A1BGP04217 495 aa25.52■■□□□ 1.68
RFC2-203ENST00000463194 EIF4A1P60842 406 aaKnown RBP25.51■■□□□ 1.67
RFC2-203ENST00000463194 FKBP8Q14318 412 aa25.51■■□□□ 1.67
RFC2-203ENST00000463194 NEUROD2Q15784 382 aa25.51■■□□□ 1.67
RFC2-203ENST00000463194 NLGN2Q8NFZ4 835 aa25.51■■□□□ 1.67
RFC2-203ENST00000463194 TRIM35Q9UPQ4 493 aa25.51■■□□□ 1.67
RFC2-203ENST00000463194 PRAMEF22A3QJZ6 481 aa25.5■■□□□ 1.67
RFC2-203ENST00000463194 USPL1Q5W0Q7 1092 aa25.5■■□□□ 1.67
RFC2-203ENST00000463194 KDM3BQ7LBC6 1761 aa25.49■■□□□ 1.67
RFC2-203ENST00000463194 PARP3Q9Y6F1 533 aa25.49■■□□□ 1.67
RFC2-203ENST00000463194 GIGYF1O75420 1035 aaPredicted RBP25.48■■□□□ 1.67
RFC2-203ENST00000463194 TM4SF1P30408 202 aa25.48■■□□□ 1.67
RFC2-203ENST00000463194 TSPYL4Q9UJ04 414 aa25.48■■□□□ 1.67
RFC2-203ENST00000463194 BCL2L12Q9HB09 334 aa25.47■■□□□ 1.67
RFC2-203ENST00000463194 APAF1O14727 1248 aa25.46■■□□□ 1.67
RFC2-203ENST00000463194 NPM2Q86SE8 214 aaKnown RBP25.46■■□□□ 1.67
RFC2-203ENST00000463194 MRS2Q9HD23 443 aa25.46■■□□□ 1.67
RFC2-203ENST00000463194 CHL1O00533 1208 aa25.44■■□□□ 1.66
RFC2-203ENST00000463194 DDR1Q08345 913 aa25.44■■□□□ 1.66
RFC2-203ENST00000463194 NBPF26B4DH59 902 aa25.43■■□□□ 1.66
RFC2-203ENST00000463194 NBPF10Q6P3W6 841 aaKnown RBP25.43■■□□□ 1.66
RFC2-203ENST00000463194 NBPF15Q8N660 670 aa25.43■■□□□ 1.66
RFC2-203ENST00000463194 POLRMTO00411 1230 aaKnown RBP25.42■■□□□ 1.66
RFC2-203ENST00000463194 TGFB2P61812 414 aa25.42■■□□□ 1.66
RFC2-203ENST00000463194 NFIXQ14938 502 aa25.42■■□□□ 1.66
RFC2-203ENST00000463194 GPR162Q16538 588 aa25.42■■□□□ 1.66
RFC2-203ENST00000463194 TBC1D2BQ9UPU7 963 aa25.42■■□□□ 1.66
RFC2-203ENST00000463194 ZNF330Q9Y3S2 320 aaPredicted RBP25.42■■□□□ 1.66
RFC2-203ENST00000463194 C10orf71Q711Q0 1435 aa25.41■■□□□ 1.66
RFC2-203ENST00000463194 CAMTA2O94983 1202 aa25.4■■□□□ 1.66
RFC2-203ENST00000463194 RGL2O15211 777 aa25.39■■□□□ 1.66
RFC2-203ENST00000463194 PIP4K2AP48426 406 aaPredicted RBP25.39■■□□□ 1.66
RFC2-203ENST00000463194 DZIP3Q86Y13 1208 aaKnown RBP25.39■■□□□ 1.66
RFC2-203ENST00000463194 CFAP44Q96MT7 982 aa25.39■■□□□ 1.66
RFC2-203ENST00000463194 KIF13BQ9NQT8 1826 aa25.39■■□□□ 1.65
RFC2-203ENST00000463194 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
RFC2-203ENST00000463194 ERBB4Q15303 1308 aa25.37■■□□□ 1.65
RFC2-203ENST00000463194 LAMB4A4D0S4 1761 aa25.37■■□□□ 1.65
RFC2-203ENST00000463194 CALD1Q05682 793 aaKnown RBP25.37■■□□□ 1.65
RFC2-203ENST00000463194 CLEC4GQ6UXB4 293 aa25.37■■□□□ 1.65
RFC2-203ENST00000463194 ZNF853P0CG23 659 aa25.36■■□□□ 1.65
RFC2-203ENST00000463194 GRIN3BO60391 1043 aa25.35■■□□□ 1.65
RFC2-203ENST00000463194 SERPINB2P05120 415 aa25.35■■□□□ 1.65
RFC2-203ENST00000463194 YBX3P16989 372 aaKnown RBP eCLIP25.35■■□□□ 1.652e-7■■■■□ 20.9
RFC2-203ENST00000463194 TBC1D9BQ66K14 1250 aa25.35■■□□□ 1.65
RFC2-203ENST00000463194 LAS1LQ9Y4W2 734 aaKnown RBP25.35■■□□□ 1.65
RFC2-203ENST00000463194 SCN7AQ01118 1682 aa25.34■■□□□ 1.65
RFC2-203ENST00000463194 CCDC27Q2M243 656 aa25.34■■□□□ 1.65
RFC2-203ENST00000463194 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
RFC2-203ENST00000463194 PXDNLA1KZ92 1463 aa25.34■■□□□ 1.65
RFC2-203ENST00000463194 IFT57Q9NWB7 429 aa25.33■■□□□ 1.65
RFC2-203ENST00000463194 GNAI1P63096 354 aa25.32■■□□□ 1.64
RFC2-203ENST00000463194 BICDL1Q6ZP65 573 aa25.32■■□□□ 1.64
RFC2-203ENST00000463194 ZNF652Q9Y2D9 606 aa25.32■■□□□ 1.64
RFC2-203ENST00000463194 A0A0G2JLW4 131 aa25.31■■□□□ 1.64
RFC2-203ENST00000463194 HOXB7P09629 217 aa25.31■■□□□ 1.64
RFC2-203ENST00000463194 SETDB2Q96T68 719 aa25.31■■□□□ 1.64
RFC2-203ENST00000463194 NRXN2Q9P2S2 1712 aa25.31■■□□□ 1.64
RFC2-203ENST00000463194 ERVV-1B6SEH8 477 aa25.3■■□□□ 1.64
RFC2-203ENST00000463194 DPEP1P16444 411 aa25.3■■□□□ 1.64
RFC2-203ENST00000463194 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
RFC2-203ENST00000463194 CARMIL3Q8ND23 1372 aa25.3■■□□□ 1.64
RFC2-203ENST00000463194 KIAA1551Q9HCM1 1747 aa25.29■■□□□ 1.64
RFC2-203ENST00000463194 EIF2S2P20042 333 aaKnown RBP25.29■■□□□ 1.64
RFC2-203ENST00000463194 KCNA3P22001 575 aa25.29■■□□□ 1.64
RFC2-203ENST00000463194 PDIA6Q15084 440 aa25.29■■□□□ 1.64
RFC2-203ENST00000463194 BCORQ6W2J9 1755 aa25.28■■□□□ 1.64
RFC2-203ENST00000463194 YY1P25490 414 aa25.28■■□□□ 1.64
RFC2-203ENST00000463194 KRT24Q2M2I5 525 aa25.28■■□□□ 1.64
RFC2-203ENST00000463194 LRP10Q7Z4F1 713 aa25.28■■□□□ 1.64
RFC2-203ENST00000463194 AFDNP55196 1824 aaKnown RBP25.28■■□□□ 1.64
RFC2-203ENST00000463194 MYL6BP14649 208 aa25.27■■□□□ 1.64
RFC2-203ENST00000463194 WWC1Q8IX03 1113 aa25.27■■□□□ 1.64
RFC2-203ENST00000463194 NGEFQ8N5V2 710 aa25.26■■□□□ 1.63
RFC2-203ENST00000463194 MAP3K15Q6ZN16 1313 aa25.26■■□□□ 1.63
RFC2-203ENST00000463194 HLFQ16534 295 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms