RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ATP2B2Q01814 1243 aa8.79□□□□□ -1
COPS3-205ENST00000463097 PSMD2Q13200 908 aa8.79□□□□□ -1
COPS3-205ENST00000463097 MTFR1Q15390 333 aa8.79□□□□□ -1
COPS3-205ENST00000463097 METTL16Q86W50 562 aaKnown RBP8.79□□□□□ -1
COPS3-205ENST00000463097 NT5DC4Q86YG4 428 aa8.79□□□□□ -1
COPS3-205ENST00000463097 RNF19AQ9NV58 838 aa8.79□□□□□ -1
COPS3-205ENST00000463097 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
COPS3-205ENST00000463097 LRFN2Q9ULH4 789 aa8.79□□□□□ -1
COPS3-205ENST00000463097 ZBTB39O15060 712 aa8.78□□□□□ -1
COPS3-205ENST00000463097 LILRA1O75019 489 aa8.78□□□□□ -1
COPS3-205ENST00000463097 EHBP1Q8NDI1 1231 aa8.78□□□□□ -1
COPS3-205ENST00000463097 MYO19Q96H55 970 aa8.78□□□□□ -1
COPS3-205ENST00000463097 NIF3L1Q9GZT8 377 aa8.78□□□□□ -1
COPS3-205ENST00000463097 METTL5Q9NRN9 209 aaKnown RBP8.78□□□□□ -1
COPS3-205ENST00000463097 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
COPS3-205ENST00000463097 CHMP3Q9Y3E7 222 aa8.78□□□□□ -1
COPS3-205ENST00000463097 BRD2P25440 801 aaKnown RBP8.77□□□□□ -1.01
COPS3-205ENST00000463097 CANXP27824 592 aaKnown RBP8.77□□□□□ -1.01
COPS3-205ENST00000463097 RNF34Q969K3 372 aa8.77□□□□□ -1.01
COPS3-205ENST00000463097 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
COPS3-205ENST00000463097 FANCCQ00597 558 aa8.76□□□□□ -1.01
COPS3-205ENST00000463097 ENOX2Q16206 610 aaKnown RBP8.76□□□□□ -1.01
COPS3-205ENST00000463097 ATCAYQ86WG3 371 aa8.76□□□□□ -1.01
COPS3-205ENST00000463097 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
COPS3-205ENST00000463097 SMARCA5O60264 1052 aaPredicted RBP8.75□□□□□ -1.01
COPS3-205ENST00000463097 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 PPP1R26Q5T8A7 1209 aaPredicted RBP8.75□□□□□ -1.01
COPS3-205ENST00000463097 ALG1LQ6GMV1 187 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 POTEAQ6S8J7 498 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 CCDC116Q8IYX3 515 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 GJD3Q8N144 294 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 MPNDQ8N594 471 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 SETDB2Q96T68 719 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 TGIF2Q9GZN2 237 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 POLIQ9UNA4 740 aa8.75□□□□□ -1.01
COPS3-205ENST00000463097 PNMA6FA0A0J9YX94 578 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
COPS3-205ENST00000463097 ADD1P35611 737 aaKnown RBP8.74□□□□□ -1.01
COPS3-205ENST00000463097 USP5P45974 858 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 PLA2G2CQ5R387 149 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 SPATA32Q96LK8 384 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 ARHGEF10LQ9HCE6 1279 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 RAB6BQ9NRW1 208 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
COPS3-205ENST00000463097 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 IL2RAP01589 272 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
COPS3-205ENST00000463097 ZNF76P36508 570 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 RPIAP49247 311 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
COPS3-205ENST00000463097 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
COPS3-205ENST00000463097 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 TINF2Q9BSI4 451 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 TANGO6Q9C0B7 1094 aa8.73□□□□□ -1.01
COPS3-205ENST00000463097 IQSEC3Q9UPP2 1182 aaPredicted RBP8.73□□□□□ -1.01
COPS3-205ENST00000463097 CDK11AQ9UQ88 783 aaPredicted RBP8.73□□□□□ -1.01
COPS3-205ENST00000463097 EML1O00423 815 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 HIRAP54198 1017 aaPredicted RBP8.72□□□□□ -1.01
COPS3-205ENST00000463097 DNM1Q05193 864 aaKnown RBP8.72□□□□□ -1.01
COPS3-205ENST00000463097 NR5A1Q13285 461 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 TLR1Q15399 786 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 TEAD4Q15561 434 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 C11orf91Q3C1V1 193 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 ETFBKMTQ8IXQ9 262 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 SLC43A3Q8NBI5 491 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 EDEM1Q92611 657 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 CCSER2Q9H7U1 834 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
COPS3-205ENST00000463097 ADH1CP00326 375 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 PDGFAP04085 211 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 GNA15P30679 374 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 ALDH16A1Q8IZ83 802 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 CNKSR1Q969H4 720 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 CAPN10Q9HC96 672 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 HRH3Q9Y5N1 445 aa8.71□□□□□ -1.02
COPS3-205ENST00000463097 CD2BP2O95400 341 aaKnown RBP8.7□□□□□ -1.02
COPS3-205ENST00000463097 NOS2P35228 1153 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 GGCXP38435 758 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 DGKZQ13574 1117 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 RTN1Q16799 776 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 FBF1Q8TES7 1133 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 HCN4Q9Y3Q4 1203 aa8.7□□□□□ -1.02
COPS3-205ENST00000463097 SIAH2O43255 324 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 ZAP70P43403 619 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 DPH6Q7L8W6 267 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 ZDHHC1Q8WTX9 485 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 CSRNP1Q96S65 589 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
COPS3-205ENST00000463097 PRKAG2Q9UGJ0 569 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms