RNA–Protein interactions for RNA: ENST00000462773.6

HLA-J-201, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 1,622 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-201ENST00000462773 NEUROD2Q15784 382 aa23.11■■□□□ 1.29
HLA-J-201ENST00000462773 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
HLA-J-201ENST00000462773 PPP4R2Q9NY27 417 aa23.11■■□□□ 1.29
HLA-J-201ENST00000462773 RRP7AQ9Y3A4 280 aaKnown RBP23.11■■□□□ 1.29
HLA-J-201ENST00000462773 COL5A3P25940 1745 aaPredicted RBP23.09■■□□□ 1.29
HLA-J-201ENST00000462773 RFC4P35249 363 aa23.09■■□□□ 1.29
HLA-J-201ENST00000462773 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
HLA-J-201ENST00000462773 IL17REQ8NFR9 667 aa23.09■■□□□ 1.29
HLA-J-201ENST00000462773 GPR162Q16538 588 aa23.08■■□□□ 1.28
HLA-J-201ENST00000462773 RTF1Q92541 710 aaKnown RBP23.08■■□□□ 1.28
HLA-J-201ENST00000462773 ARHGEF1Q92888 912 aaKnown RBP23.08■■□□□ 1.28
HLA-J-201ENST00000462773 YY1P25490 414 aa23.07■■□□□ 1.28
HLA-J-201ENST00000462773 DNAJC10Q8IXB1 793 aa23.07■■□□□ 1.28
HLA-J-201ENST00000462773 NLGN1Q8N2Q7 840 aa23.07■■□□□ 1.28
HLA-J-201ENST00000462773 SPINK5Q9NQ38 1064 aaPredicted RBP23.07■■□□□ 1.28
HLA-J-201ENST00000462773 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
HLA-J-201ENST00000462773 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
HLA-J-201ENST00000462773 VSIG10Q8N0Z9 540 aa23.06■■□□□ 1.28
HLA-J-201ENST00000462773 NLGN2Q8NFZ4 835 aa23.06■■□□□ 1.28
HLA-J-201ENST00000462773 CICQ96RK0 1608 aaPredicted RBP23.06■■□□□ 1.28
HLA-J-201ENST00000462773 CCDC87Q9NVE4 849 aa23.05■■□□□ 1.28
HLA-J-201ENST00000462773 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
HLA-J-201ENST00000462773 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
HLA-J-201ENST00000462773 MMP10P09238 476 aa23.04■■□□□ 1.28
HLA-J-201ENST00000462773 ZNF790Q6PG37 636 aa23.04■■□□□ 1.28
HLA-J-201ENST00000462773 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
HLA-J-201ENST00000462773 TJP1Q07157 1748 aa23.03■■□□□ 1.28
HLA-J-201ENST00000462773 IL16Q14005 1332 aa23.03■■□□□ 1.28
HLA-J-201ENST00000462773 MYH14Q7Z406 1995 aaKnown RBP23.03■■□□□ 1.28
HLA-J-201ENST00000462773 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
HLA-J-201ENST00000462773 INTS5Q6P9B9 1019 aaKnown RBP23.02■■□□□ 1.28
HLA-J-201ENST00000462773 UTRNP46939 3433 aa23.02■■□□□ 1.28
HLA-J-201ENST00000462773 STARD3NLO95772 234 aa23.01■■□□□ 1.27
HLA-J-201ENST00000462773 RIPK4P57078 832 aa23.01■■□□□ 1.27
HLA-J-201ENST00000462773 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.01■■□□□ 1.27
HLA-J-201ENST00000462773 BTBD11A6QL63 1104 aa23■■□□□ 1.27
HLA-J-201ENST00000462773 HTATSF1O43719 755 aaKnown RBP23■■□□□ 1.27
HLA-J-201ENST00000462773 GYS1P13807 737 aa23■■□□□ 1.27
HLA-J-201ENST00000462773 TRIM35Q9UPQ4 493 aa23■■□□□ 1.27
HLA-J-201ENST00000462773 NFE2L2Q16236 605 aa23■■□□□ 1.27
HLA-J-201ENST00000462773 ZNF496Q96IT1 587 aaPredicted RBP23■■□□□ 1.27
HLA-J-201ENST00000462773 TEX13AQ9BXU3 409 aaPredicted RBP23■■□□□ 1.27
HLA-J-201ENST00000462773 MCM10Q7L590 875 aa22.99■■□□□ 1.27
HLA-J-201ENST00000462773 FMNL2Q96PY5 1086 aa22.99■■□□□ 1.27
HLA-J-201ENST00000462773 USP42Q9H9J4 1324 aaKnown RBP22.98■■□□□ 1.27
HLA-J-201ENST00000462773 ZPR1O75312 459 aa22.98■■□□□ 1.27
HLA-J-201ENST00000462773 HEG1Q9ULI3 1381 aa22.98■■□□□ 1.27
HLA-J-201ENST00000462773 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
HLA-J-201ENST00000462773 UBR2Q8IWV8 1755 aa22.97■■□□□ 1.27
HLA-J-201ENST00000462773 ZBTB1Q9Y2K1 713 aa22.97■■□□□ 1.27
HLA-J-201ENST00000462773 PARP3Q9Y6F1 533 aa22.97■■□□□ 1.27
HLA-J-201ENST00000462773 GRIN3BO60391 1043 aa22.96■■□□□ 1.27
HLA-J-201ENST00000462773 CALD1Q05682 793 aaKnown RBP22.96■■□□□ 1.27
HLA-J-201ENST00000462773 LMOD3Q0VAK6 560 aa22.96■■□□□ 1.27
HLA-J-201ENST00000462773 SRP68Q9UHB9 627 aaKnown RBP22.96■■□□□ 1.27
HLA-J-201ENST00000462773 C4AP0C0L4 1744 aa22.95■■□□□ 1.27
HLA-J-201ENST00000462773 CT47B1P0C2W7 299 aaPredicted RBP22.95■■□□□ 1.26
HLA-J-201ENST00000462773 DCTN1Q14203 1278 aa22.95■■□□□ 1.26
HLA-J-201ENST00000462773 SIPA1L3O60292 1781 aaPredicted RBP22.95■■□□□ 1.26
HLA-J-201ENST00000462773 COL15A1P39059 1388 aa22.95■■□□□ 1.26
HLA-J-201ENST00000462773 GOLGB1Q14789 3259 aaKnown RBP22.94■■□□□ 1.26
HLA-J-201ENST00000462773 CANXP27824 592 aaKnown RBP22.94■■□□□ 1.26
HLA-J-201ENST00000462773 YBX3P16989 372 aaKnown RBP eCLIP22.92■■□□□ 1.26
HLA-J-201ENST00000462773 USPL1Q5W0Q7 1092 aa22.92■■□□□ 1.26
HLA-J-201ENST00000462773 NPM2Q86SE8 214 aaKnown RBP22.92■■□□□ 1.26
HLA-J-201ENST00000462773 NARFQ9UHQ1 456 aa22.92■■□□□ 1.26
HLA-J-201ENST00000462773 KCNQ3O43525 872 aa22.91■■□□□ 1.26
HLA-J-201ENST00000462773 TAF7Q15545 349 aaPredicted RBP22.91■■□□□ 1.26
HLA-J-201ENST00000462773 A0A087WZG4 1122 aa22.9■■□□□ 1.26
HLA-J-201ENST00000462773 FANCIQ9NVI1 1328 aa22.9■■□□□ 1.26
HLA-J-201ENST00000462773 DLG5Q8TDM6 1919 aa22.9■■□□□ 1.26
HLA-J-201ENST00000462773 ZNF330Q9Y3S2 320 aaPredicted RBP22.9■■□□□ 1.26
HLA-J-201ENST00000462773 PLIN1O60240 522 aa22.89■■□□□ 1.25
HLA-J-201ENST00000462773 TGFB2P61812 414 aa22.89■■□□□ 1.25
HLA-J-201ENST00000462773 SNRPA1P09661 255 aaKnown RBP22.88■■□□□ 1.25
HLA-J-201ENST00000462773 EIF5P55010 431 aaKnown RBP22.88■■□□□ 1.25
HLA-J-201ENST00000462773 C10orf71Q711Q0 1435 aa22.88■■□□□ 1.25
HLA-J-201ENST00000462773 IL6STP40189 918 aaPredicted RBP22.87■■□□□ 1.25
HLA-J-201ENST00000462773 B4GALNT3Q6L9W6 998 aa22.87■■□□□ 1.25
HLA-J-201ENST00000462773 EXOC6Q8TAG9 804 aa22.87■■□□□ 1.25
HLA-J-201ENST00000462773 CHD4Q14839 1912 aa22.87■■□□□ 1.25
HLA-J-201ENST00000462773 CCDC136Q96JN2 1154 aa22.86■■□□□ 1.25
HLA-J-201ENST00000462773 WWC3Q9ULE0 1092 aa22.86■■□□□ 1.25
HLA-J-201ENST00000462773 DDR1Q08345 913 aa22.86■■□□□ 1.25
HLA-J-201ENST00000462773 A1BGP04217 495 aa22.85■■□□□ 1.25
HLA-J-201ENST00000462773 TM4SF1P30408 202 aa22.85■■□□□ 1.25
HLA-J-201ENST00000462773 RARSP54136 660 aaKnown RBP22.85■■□□□ 1.25
HLA-J-201ENST00000462773 PXDNLA1KZ92 1463 aa22.84■■□□□ 1.25
HLA-J-201ENST00000462773 POLRMTO00411 1230 aaKnown RBP22.84■■□□□ 1.25
HLA-J-201ENST00000462773 GNAI1P63096 354 aa22.84■■□□□ 1.25
HLA-J-201ENST00000462773 IFT57Q9NWB7 429 aa22.84■■□□□ 1.25
HLA-J-201ENST00000462773 USP16Q9Y5T5 823 aa22.84■■□□□ 1.25
HLA-J-201ENST00000462773 A0A0G2JLW4 131 aa22.83■■□□□ 1.25
HLA-J-201ENST00000462773 BCAR3O75815 825 aa22.83■■□□□ 1.25
HLA-J-201ENST00000462773 NFIXQ14938 502 aa22.83■■□□□ 1.25
HLA-J-201ENST00000462773 TSR2Q969E8 191 aaKnown RBP22.83■■□□□ 1.25
HLA-J-201ENST00000462773 MIS18AQ9NYP9 233 aa22.83■■□□□ 1.25
HLA-J-201ENST00000462773 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
HLA-J-201ENST00000462773 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
HLA-J-201ENST00000462773 KIF13BQ9NQT8 1826 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms