RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 SRP68Q9UHB9 627 aaKnown RBP17.59■□□□□ 0.41
LRRC47-202ENST00000462356 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.41
LRRC47-202ENST00000462356 RFC4P35249 363 aa17.58■□□□□ 0.4
LRRC47-202ENST00000462356 SYT17Q9BSW7 474 aa17.58■□□□□ 0.4
LRRC47-202ENST00000462356 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
LRRC47-202ENST00000462356 PIP4K2AP48426 406 aaPredicted RBP17.57■□□□□ 0.4
LRRC47-202ENST00000462356 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
LRRC47-202ENST00000462356 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
LRRC47-202ENST00000462356 A1BGP04217 495 aa17.56■□□□□ 0.4
LRRC47-202ENST00000462356 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
LRRC47-202ENST00000462356 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
LRRC47-202ENST00000462356 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
LRRC47-202ENST00000462356 APAF1O14727 1248 aa17.55■□□□□ 0.4
LRRC47-202ENST00000462356 STARD3NLO95772 234 aa17.55■□□□□ 0.4
LRRC47-202ENST00000462356 ADRA2BP18089 450 aa17.55■□□□□ 0.4
LRRC47-202ENST00000462356 GYS1P13807 737 aa17.54■□□□□ 0.4
LRRC47-202ENST00000462356 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
LRRC47-202ENST00000462356 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
LRRC47-202ENST00000462356 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
LRRC47-202ENST00000462356 NLGN2Q8NFZ4 835 aa17.53■□□□□ 0.4
LRRC47-202ENST00000462356 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
LRRC47-202ENST00000462356 MMP10P09238 476 aa17.52■□□□□ 0.4
LRRC47-202ENST00000462356 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
LRRC47-202ENST00000462356 FKBP8Q14318 412 aa17.52■□□□□ 0.4
LRRC47-202ENST00000462356 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
LRRC47-202ENST00000462356 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
LRRC47-202ENST00000462356 TSPYL4Q9UJ04 414 aa17.52■□□□□ 0.4
LRRC47-202ENST00000462356 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
LRRC47-202ENST00000462356 COL15A1P39059 1388 aa17.52■□□□□ 0.39
LRRC47-202ENST00000462356 EIF4A1P60842 406 aaKnown RBP17.51■□□□□ 0.39
LRRC47-202ENST00000462356 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
LRRC47-202ENST00000462356 ZPR1O75312 459 aa17.5■□□□□ 0.39
LRRC47-202ENST00000462356 EIF5P55010 431 aaKnown RBP17.5■□□□□ 0.39
LRRC47-202ENST00000462356 NLGN1Q8N2Q7 840 aa17.5■□□□□ 0.39
LRRC47-202ENST00000462356 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
LRRC47-202ENST00000462356 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
LRRC47-202ENST00000462356 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
LRRC47-202ENST00000462356 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
LRRC47-202ENST00000462356 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
LRRC47-202ENST00000462356 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
LRRC47-202ENST00000462356 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
LRRC47-202ENST00000462356 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
LRRC47-202ENST00000462356 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
LRRC47-202ENST00000462356 NBPF26B4DH59 902 aa17.46■□□□□ 0.39
LRRC47-202ENST00000462356 IL6STP40189 918 aaPredicted RBP17.46■□□□□ 0.39
LRRC47-202ENST00000462356 NBPF10Q6P3W6 841 aaKnown RBP17.46■□□□□ 0.39
LRRC47-202ENST00000462356 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
LRRC47-202ENST00000462356 NGEFQ8N5V2 710 aa17.46■□□□□ 0.39
LRRC47-202ENST00000462356 NBPF15Q8N660 670 aa17.46■□□□□ 0.39
LRRC47-202ENST00000462356 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
LRRC47-202ENST00000462356 DDR1Q08345 913 aa17.45■□□□□ 0.38
LRRC47-202ENST00000462356 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
LRRC47-202ENST00000462356 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
LRRC47-202ENST00000462356 A0A087WZG4 1122 aa17.44■□□□□ 0.38
LRRC47-202ENST00000462356 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
LRRC47-202ENST00000462356 CHL1O00533 1208 aa17.44■□□□□ 0.38
LRRC47-202ENST00000462356 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
LRRC47-202ENST00000462356 TM4SF1P30408 202 aa17.44■□□□□ 0.38
LRRC47-202ENST00000462356 NFIXQ14938 502 aa17.44■□□□□ 0.38
LRRC47-202ENST00000462356 CD2APQ9Y5K6 639 aa17.44■□□□□ 0.38
LRRC47-202ENST00000462356 MYL6BP14649 208 aa17.43■□□□□ 0.38
LRRC47-202ENST00000462356 GPR162Q16538 588 aa17.43■□□□□ 0.38
LRRC47-202ENST00000462356 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
LRRC47-202ENST00000462356 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
LRRC47-202ENST00000462356 POLRMTO00411 1230 aaKnown RBP17.42■□□□□ 0.38
LRRC47-202ENST00000462356 TBC1D9BQ66K14 1250 aa17.42■□□□□ 0.38
LRRC47-202ENST00000462356 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
LRRC47-202ENST00000462356 ANXA1P04083 346 aa17.41■□□□□ 0.38
LRRC47-202ENST00000462356 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
LRRC47-202ENST00000462356 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
LRRC47-202ENST00000462356 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
LRRC47-202ENST00000462356 A0A0G2JLW4 131 aa17.39■□□□□ 0.37
LRRC47-202ENST00000462356 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
LRRC47-202ENST00000462356 YBX3P16989 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
LRRC47-202ENST00000462356 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
LRRC47-202ENST00000462356 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
LRRC47-202ENST00000462356 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
LRRC47-202ENST00000462356 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
LRRC47-202ENST00000462356 SERPINB2P05120 415 aa17.38■□□□□ 0.37
LRRC47-202ENST00000462356 PROSER3Q2NL68 480 aa17.38■□□□□ 0.37
LRRC47-202ENST00000462356 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
LRRC47-202ENST00000462356 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
LRRC47-202ENST00000462356 AFDNP55196 1824 aaKnown RBP17.37■□□□□ 0.37
LRRC47-202ENST00000462356 DPEP1P16444 411 aa17.37■□□□□ 0.37
LRRC47-202ENST00000462356 HLFQ16534 295 aa17.37■□□□□ 0.37
LRRC47-202ENST00000462356 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
LRRC47-202ENST00000462356 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
LRRC47-202ENST00000462356 GNAI1P63096 354 aa17.36■□□□□ 0.37
LRRC47-202ENST00000462356 PDIA6Q15084 440 aa17.36■□□□□ 0.37
LRRC47-202ENST00000462356 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
LRRC47-202ENST00000462356 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
LRRC47-202ENST00000462356 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 CHRNA5P30532 468 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
LRRC47-202ENST00000462356 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 PXDNLA1KZ92 1463 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
LRRC47-202ENST00000462356 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms