RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
PKP4-208ENST00000462335 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
PKP4-208ENST00000462335 SMIM5Q71RC9 77 aa12.43□□□□□ -0.42
PKP4-208ENST00000462335 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
PKP4-208ENST00000462335 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
PKP4-208ENST00000462335 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
PKP4-208ENST00000462335 NPHP1O15259 732 aa12.42□□□□□ -0.42
PKP4-208ENST00000462335 A1BGP04217 495 aa12.42□□□□□ -0.42
PKP4-208ENST00000462335 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
PKP4-208ENST00000462335 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
PKP4-208ENST00000462335 USP16Q9Y5T5 823 aa12.42□□□□□ -0.42
PKP4-208ENST00000462335 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
PKP4-208ENST00000462335 PAPPAQ13219 1627 aa12.41□□□□□ -0.42
PKP4-208ENST00000462335 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
PKP4-208ENST00000462335 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
PKP4-208ENST00000462335 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
PKP4-208ENST00000462335 CHL1O00533 1208 aa12.4□□□□□ -0.42
PKP4-208ENST00000462335 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
PKP4-208ENST00000462335 IL6STP40189 918 aaPredicted RBP12.4□□□□□ -0.42
PKP4-208ENST00000462335 MIER1Q8N108 512 aa12.4□□□□□ -0.42
PKP4-208ENST00000462335 IFT57Q9NWB7 429 aa12.4□□□□□ -0.42
PKP4-208ENST00000462335 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
PKP4-208ENST00000462335 SIPA1L3O60292 1781 aaPredicted RBP12.4□□□□□ -0.42
PKP4-208ENST00000462335 KCPQ6ZWJ8 1503 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 MYL6BP14649 208 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
PKP4-208ENST00000462335 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
PKP4-208ENST00000462335 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 MMP10P09238 476 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 USPL1Q5W0Q7 1092 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
PKP4-208ENST00000462335 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
PKP4-208ENST00000462335 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 COL15A1P39059 1388 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
PKP4-208ENST00000462335 PTGER2P43116 358 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 PIP4K2AP48426 406 aaPredicted RBP12.37□□□□□ -0.43
PKP4-208ENST00000462335 EIF5P55010 431 aaKnown RBP12.37□□□□□ -0.43
PKP4-208ENST00000462335 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
PKP4-208ENST00000462335 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
PKP4-208ENST00000462335 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
PKP4-208ENST00000462335 TJP1Q07157 1748 aa12.37□□□□□ -0.43
PKP4-208ENST00000462335 UBR2Q8IWV8 1755 aa12.36□□□□□ -0.43
PKP4-208ENST00000462335 ELL2O00472 640 aaPredicted RBP12.36□□□□□ -0.43
PKP4-208ENST00000462335 GYS1P13807 737 aa12.36□□□□□ -0.43
PKP4-208ENST00000462335 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
PKP4-208ENST00000462335 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
PKP4-208ENST00000462335 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
PKP4-208ENST00000462335 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
PKP4-208ENST00000462335 FHDC1Q9C0D6 1143 aaPredicted RBP12.36□□□□□ -0.43
PKP4-208ENST00000462335 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
PKP4-208ENST00000462335 USP42Q9H9J4 1324 aaKnown RBP12.36□□□□□ -0.43
PKP4-208ENST00000462335 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
PKP4-208ENST00000462335 FKBP8Q14318 412 aa12.35□□□□□ -0.43
PKP4-208ENST00000462335 LRP5O75197 1615 aa12.35□□□□□ -0.43
PKP4-208ENST00000462335 IL16Q14005 1332 aa12.35□□□□□ -0.43
PKP4-208ENST00000462335 ERBB4Q15303 1308 aa12.35□□□□□ -0.43
PKP4-208ENST00000462335 HOXB7P09629 217 aa12.34□□□□□ -0.43
PKP4-208ENST00000462335 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
PKP4-208ENST00000462335 GPR162Q16538 588 aa12.34□□□□□ -0.43
PKP4-208ENST00000462335 SYT17Q9BSW7 474 aa12.34□□□□□ -0.43
PKP4-208ENST00000462335 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
PKP4-208ENST00000462335 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
PKP4-208ENST00000462335 TSR2Q969E8 191 aaKnown RBP12.33□□□□□ -0.44
PKP4-208ENST00000462335 DBF4Q9UBU7 674 aaPredicted RBP12.33□□□□□ -0.44
PKP4-208ENST00000462335 CD2APQ9Y5K6 639 aa12.33□□□□□ -0.44
PKP4-208ENST00000462335 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
PKP4-208ENST00000462335 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
PKP4-208ENST00000462335 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
PKP4-208ENST00000462335 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
PKP4-208ENST00000462335 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
PKP4-208ENST00000462335 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
PKP4-208ENST00000462335 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
PKP4-208ENST00000462335 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
PKP4-208ENST00000462335 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
PKP4-208ENST00000462335 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
PKP4-208ENST00000462335 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
PKP4-208ENST00000462335 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
PKP4-208ENST00000462335 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
PKP4-208ENST00000462335 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
PKP4-208ENST00000462335 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
PKP4-208ENST00000462335 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
PKP4-208ENST00000462335 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
PKP4-208ENST00000462335 DDX58O95786 925 aaKnown RBP12.3□□□□□ -0.44
PKP4-208ENST00000462335 SERPINB2P05120 415 aa12.3□□□□□ -0.44
PKP4-208ENST00000462335 ST5P78524 1137 aa12.3□□□□□ -0.44
PKP4-208ENST00000462335 NFIXQ14938 502 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms