RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
SYN3-207ENST00000462268 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
SYN3-207ENST00000462268 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
SYN3-207ENST00000462268 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
SYN3-207ENST00000462268 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
SYN3-207ENST00000462268 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
SYN3-207ENST00000462268 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
SYN3-207ENST00000462268 YY1P25490 414 aa11.71□□□□□ -0.53
SYN3-207ENST00000462268 GPR162Q16538 588 aa11.71□□□□□ -0.53
SYN3-207ENST00000462268 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
SYN3-207ENST00000462268 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
SYN3-207ENST00000462268 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.53
SYN3-207ENST00000462268 UBR3Q6ZT12 1888 aa11.7□□□□□ -0.54
SYN3-207ENST00000462268 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
SYN3-207ENST00000462268 MMP10P09238 476 aa11.7□□□□□ -0.54
SYN3-207ENST00000462268 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
SYN3-207ENST00000462268 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
SYN3-207ENST00000462268 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
SYN3-207ENST00000462268 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
SYN3-207ENST00000462268 MAPK8IP3Q9UPT6 1336 aa11.69□□□□□ -0.54
SYN3-207ENST00000462268 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
SYN3-207ENST00000462268 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
SYN3-207ENST00000462268 STARD3NLO95772 234 aa11.69□□□□□ -0.54
SYN3-207ENST00000462268 GYS1P13807 737 aa11.69□□□□□ -0.54
SYN3-207ENST00000462268 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
SYN3-207ENST00000462268 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
SYN3-207ENST00000462268 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
SYN3-207ENST00000462268 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
SYN3-207ENST00000462268 HEG1Q9ULI3 1381 aa11.68□□□□□ -0.54
SYN3-207ENST00000462268 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
SYN3-207ENST00000462268 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
SYN3-207ENST00000462268 ZBTB1Q9Y2K1 713 aa11.68□□□□□ -0.54
SYN3-207ENST00000462268 COL15A1P39059 1388 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 TJP1Q07157 1748 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 GRIN3BO60391 1043 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 ZPR1O75312 459 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 MCM10Q7L590 875 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
SYN3-207ENST00000462268 NFE2L2Q16236 605 aa11.66□□□□□ -0.54
SYN3-207ENST00000462268 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
SYN3-207ENST00000462268 A0A087WZG4 1122 aa11.65□□□□□ -0.54
SYN3-207ENST00000462268 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
SYN3-207ENST00000462268 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
SYN3-207ENST00000462268 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
SYN3-207ENST00000462268 NPM2Q86SE8 214 aaKnown RBP11.65□□□□□ -0.54
SYN3-207ENST00000462268 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
SYN3-207ENST00000462268 NARFQ9UHQ1 456 aa11.65□□□□□ -0.54
SYN3-207ENST00000462268 C10orf71Q711Q0 1435 aa11.65□□□□□ -0.54
SYN3-207ENST00000462268 UTRNP46939 3433 aa11.64□□□□□ -0.55
SYN3-207ENST00000462268 TGFB2P61812 414 aa11.64□□□□□ -0.55
SYN3-207ENST00000462268 FKBP8Q14318 412 aa11.64□□□□□ -0.55
SYN3-207ENST00000462268 WDR43Q15061 677 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYN3-207ENST00000462268 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
SYN3-207ENST00000462268 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
SYN3-207ENST00000462268 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
SYN3-207ENST00000462268 KCNQ3O43525 872 aa11.63□□□□□ -0.55
SYN3-207ENST00000462268 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
SYN3-207ENST00000462268 YBX3P16989 372 aaKnown RBP eCLIP11.63□□□□□ -0.55
SYN3-207ENST00000462268 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
SYN3-207ENST00000462268 EIF5P55010 431 aaKnown RBP11.63□□□□□ -0.55
SYN3-207ENST00000462268 LMOD3Q0VAK6 560 aa11.63□□□□□ -0.55
SYN3-207ENST00000462268 PRKRIP1Q9H875 184 aaPredicted RBP11.63□□□□□ -0.55
SYN3-207ENST00000462268 UBR2Q8IWV8 1755 aa11.63□□□□□ -0.55
SYN3-207ENST00000462268 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
SYN3-207ENST00000462268 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
SYN3-207ENST00000462268 C4AP0C0L4 1744 aa11.61□□□□□ -0.55
SYN3-207ENST00000462268 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
SYN3-207ENST00000462268 DDR1Q08345 913 aa11.61□□□□□ -0.55
SYN3-207ENST00000462268 GOLGB1Q14789 3259 aaKnown RBP11.6□□□□□ -0.55
SYN3-207ENST00000462268 MYH14Q7Z406 1995 aaKnown RBP11.6□□□□□ -0.55
SYN3-207ENST00000462268 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
SYN3-207ENST00000462268 GABBR2O75899 941 aa11.6□□□□□ -0.55
SYN3-207ENST00000462268 A1BGP04217 495 aa11.6□□□□□ -0.55
SYN3-207ENST00000462268 TM4SF1P30408 202 aa11.6□□□□□ -0.55
SYN3-207ENST00000462268 RIPK4P57078 832 aa11.6□□□□□ -0.55
SYN3-207ENST00000462268 NFIXQ14938 502 aa11.6□□□□□ -0.55
SYN3-207ENST00000462268 TMPOP42166 694 aaKnown RBP11.59□□□□□ -0.55
SYN3-207ENST00000462268 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
SYN3-207ENST00000462268 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
SYN3-207ENST00000462268 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
SYN3-207ENST00000462268 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
SYN3-207ENST00000462268 DPEP1P16444 411 aa11.58□□□□□ -0.56
SYN3-207ENST00000462268 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
SYN3-207ENST00000462268 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
SYN3-207ENST00000462268 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
SYN3-207ENST00000462268 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
SYN3-207ENST00000462268 TSPYL4Q9UJ04 414 aa11.58□□□□□ -0.56
SYN3-207ENST00000462268 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
SYN3-207ENST00000462268 TBC1D2BQ9UPU7 963 aa11.58□□□□□ -0.56
SYN3-207ENST00000462268 CARMIL3Q8ND23 1372 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 A0A0G2JLW4 131 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 PRAMEF22A3QJZ6 481 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
SYN3-207ENST00000462268 RGL2O15211 777 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 SERPINB2P05120 415 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
SYN3-207ENST00000462268 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
SYN3-207ENST00000462268 ZNF652Q9Y2D9 606 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms