RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-222ENST00000462212 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
ITSN1-222ENST00000462212 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
ITSN1-222ENST00000462212 USP42Q9H9J4 1324 aaKnown RBP11.03□□□□□ -0.64
ITSN1-222ENST00000462212 RIPK4P57078 832 aa11.02□□□□□ -0.65
ITSN1-222ENST00000462212 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
ITSN1-222ENST00000462212 THUMPD2Q9BTF0 503 aaKnown RBP11.02□□□□□ -0.65
ITSN1-222ENST00000462212 COL15A1P39059 1388 aa11.02□□□□□ -0.65
ITSN1-222ENST00000462212 MMP10P09238 476 aa11.01□□□□□ -0.65
ITSN1-222ENST00000462212 EIF5P55010 431 aaKnown RBP11.01□□□□□ -0.65
ITSN1-222ENST00000462212 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
ITSN1-222ENST00000462212 CD2APQ9Y5K6 639 aa11.01□□□□□ -0.65
ITSN1-222ENST00000462212 SNRPA1P09661 255 aaKnown RBP11□□□□□ -0.65
ITSN1-222ENST00000462212 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
ITSN1-222ENST00000462212 CCDC184Q52MB2 194 aa11□□□□□ -0.65
ITSN1-222ENST00000462212 NLGN2Q8NFZ4 835 aa11□□□□□ -0.65
ITSN1-222ENST00000462212 MIS18AQ9NYP9 233 aa11□□□□□ -0.65
ITSN1-222ENST00000462212 SRP68Q9UHB9 627 aaKnown RBP11□□□□□ -0.65
ITSN1-222ENST00000462212 NARFQ9UHQ1 456 aa11□□□□□ -0.65
ITSN1-222ENST00000462212 KIF13BQ9NQT8 1826 aa11□□□□□ -0.65
ITSN1-222ENST00000462212 PRAMEF22A3QJZ6 481 aa10.99□□□□□ -0.65
ITSN1-222ENST00000462212 ANP32CO43423 234 aa10.99□□□□□ -0.65
ITSN1-222ENST00000462212 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
ITSN1-222ENST00000462212 IL6STP40189 918 aaPredicted RBP10.99□□□□□ -0.65
ITSN1-222ENST00000462212 FKBP8Q14318 412 aa10.99□□□□□ -0.65
ITSN1-222ENST00000462212 BABAM1Q9NWV8 329 aa10.99□□□□□ -0.65
ITSN1-222ENST00000462212 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
ITSN1-222ENST00000462212 USP16Q9Y5T5 823 aa10.99□□□□□ -0.65
ITSN1-222ENST00000462212 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 ZPR1O75312 459 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 A1BGP04217 495 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 TM4SF1P30408 202 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 EIF4A1P60842 406 aaKnown RBP10.98□□□□□ -0.65
ITSN1-222ENST00000462212 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 RRP7AQ9Y3A4 280 aaKnown RBP10.98□□□□□ -0.65
ITSN1-222ENST00000462212 C10orf71Q711Q0 1435 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 UTRNP46939 3433 aa10.98□□□□□ -0.65
ITSN1-222ENST00000462212 A0A087WZG4 1122 aa10.97□□□□□ -0.65
ITSN1-222ENST00000462212 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
ITSN1-222ENST00000462212 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
ITSN1-222ENST00000462212 DDR1Q08345 913 aa10.97□□□□□ -0.65
ITSN1-222ENST00000462212 SCN7AQ01118 1682 aa10.97□□□□□ -0.65
ITSN1-222ENST00000462212 KIAA1551Q9HCM1 1747 aa10.96□□□□□ -0.65
ITSN1-222ENST00000462212 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
ITSN1-222ENST00000462212 POLRMTO00411 1230 aaKnown RBP10.96□□□□□ -0.65
ITSN1-222ENST00000462212 NEUROD2Q15784 382 aa10.96□□□□□ -0.65
ITSN1-222ENST00000462212 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
ITSN1-222ENST00000462212 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
ITSN1-222ENST00000462212 TSPYL4Q9UJ04 414 aa10.96□□□□□ -0.65
ITSN1-222ENST00000462212 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
ITSN1-222ENST00000462212 NRXN2Q9P2S2 1712 aa10.95□□□□□ -0.66
ITSN1-222ENST00000462212 CHL1O00533 1208 aa10.95□□□□□ -0.66
ITSN1-222ENST00000462212 APAF1O14727 1248 aa10.95□□□□□ -0.66
ITSN1-222ENST00000462212 NFIXQ14938 502 aa10.95□□□□□ -0.66
ITSN1-222ENST00000462212 BCORQ6W2J9 1755 aa10.95□□□□□ -0.66
ITSN1-222ENST00000462212 PXDNLA1KZ92 1463 aa10.94□□□□□ -0.66
ITSN1-222ENST00000462212 RGL2O15211 777 aa10.94□□□□□ -0.66
ITSN1-222ENST00000462212 CAMTA2O94983 1202 aa10.94□□□□□ -0.66
ITSN1-222ENST00000462212 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
ITSN1-222ENST00000462212 TGFB2P61812 414 aa10.94□□□□□ -0.66
ITSN1-222ENST00000462212 MRS2Q9HD23 443 aa10.94□□□□□ -0.66
ITSN1-222ENST00000462212 TBC1D2BQ9UPU7 963 aa10.94□□□□□ -0.66
ITSN1-222ENST00000462212 AFDNP55196 1824 aaKnown RBP10.93□□□□□ -0.66
ITSN1-222ENST00000462212 ERBB4Q15303 1308 aa10.93□□□□□ -0.66
ITSN1-222ENST00000462212 ZNF853P0CG23 659 aa10.93□□□□□ -0.66
ITSN1-222ENST00000462212 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.66
ITSN1-222ENST00000462212 GPR162Q16538 588 aa10.93□□□□□ -0.66
ITSN1-222ENST00000462212 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
ITSN1-222ENST00000462212 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
ITSN1-222ENST00000462212 GOLGB1Q14789 3259 aaKnown RBP10.93□□□□□ -0.66
ITSN1-222ENST00000462212 CHD4Q14839 1912 aa10.92□□□□□ -0.66
ITSN1-222ENST00000462212 BRCA1P38398 1863 aaKnown RBP10.92□□□□□ -0.66
ITSN1-222ENST00000462212 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
ITSN1-222ENST00000462212 TBC1D9BQ66K14 1250 aa10.92□□□□□ -0.66
ITSN1-222ENST00000462212 CLEC4GQ6UXB4 293 aa10.92□□□□□ -0.66
ITSN1-222ENST00000462212 NPM2Q86SE8 214 aaKnown RBP10.92□□□□□ -0.66
ITSN1-222ENST00000462212 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
ITSN1-222ENST00000462212 N4BP2Q86UW6 1770 aaPredicted RBP10.91□□□□□ -0.66
ITSN1-222ENST00000462212 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
ITSN1-222ENST00000462212 SERPINB2P05120 415 aa10.91□□□□□ -0.66
ITSN1-222ENST00000462212 CCDC27Q2M243 656 aa10.91□□□□□ -0.66
ITSN1-222ENST00000462212 LRP10Q7Z4F1 713 aa10.91□□□□□ -0.66
ITSN1-222ENST00000462212 IFT57Q9NWB7 429 aa10.91□□□□□ -0.66
ITSN1-222ENST00000462212 HOXB7P09629 217 aa10.9□□□□□ -0.66
ITSN1-222ENST00000462212 DPEP1P16444 411 aa10.9□□□□□ -0.66
ITSN1-222ENST00000462212 KCNA3P22001 575 aa10.9□□□□□ -0.66
ITSN1-222ENST00000462212 CALD1Q05682 793 aaKnown RBP10.9□□□□□ -0.66
ITSN1-222ENST00000462212 PDIA6Q15084 440 aa10.9□□□□□ -0.66
ITSN1-222ENST00000462212 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
ITSN1-222ENST00000462212 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.67
ITSN1-222ENST00000462212 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
ITSN1-222ENST00000462212 KRT24Q2M2I5 525 aa10.89□□□□□ -0.67
ITSN1-222ENST00000462212 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
ITSN1-222ENST00000462212 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
ITSN1-222ENST00000462212 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
ITSN1-222ENST00000462212 LAS1LQ9Y4W2 734 aaKnown RBP10.89□□□□□ -0.67
ITSN1-222ENST00000462212 MAP3K15Q6ZN16 1313 aa10.88□□□□□ -0.67
ITSN1-222ENST00000462212 ERVV-1B6SEH8 477 aa10.88□□□□□ -0.67
ITSN1-222ENST00000462212 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms