RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 TRAIPQ9BWF2 469 aa8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 CXXC1Q9P0U4 656 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 USP3Q9Y6I4 520 aa8.2□□□□□ -1.1
PRPF4B-202ENST00000461612 SERTM1A2A2V5 107 aa8.19□□□□□ -1.1
PRPF4B-202ENST00000461612 ATP2B4P23634 1241 aa8.19□□□□□ -1.1
PRPF4B-202ENST00000461612 HIRAP54198 1017 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-202ENST00000461612 OCLNQ16625 522 aa8.19□□□□□ -1.1
PRPF4B-202ENST00000461612 C2orf49Q9BVC5 232 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-202ENST00000461612 DYRK1BQ9Y463 629 aa8.19□□□□□ -1.1
PRPF4B-202ENST00000461612 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 PRMT3O60678 531 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 RHOQP17081 205 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 SSFA2P28290 1259 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 L3MBTL2Q969R5 705 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 PRIMPOLQ96LW4 560 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 ZDHHC3Q9NYG2 299 aa8.18□□□□□ -1.1
PRPF4B-202ENST00000461612 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 SOBPA7XYQ1 873 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 POTECB2RU33 542 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 PTSQ03393 145 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 NBPF1Q3BBV0 1214 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 TBCELQ5QJ74 424 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 ZDHHC1Q8WTX9 485 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 COL26A1Q96A83 441 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 SLAIN2Q9P270 581 aa8.17□□□□□ -1.1
PRPF4B-202ENST00000461612 EML1O00423 815 aa8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 PDIA4P13667 645 aaKnown RBP8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 PHKA2P46019 1235 aa8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 C1orf53Q5VUE5 145 aa8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 VTI1AQ96AJ9 217 aa8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
PRPF4B-202ENST00000461612 LGR5O75473 907 aa8.15□□□□□ -1.1
PRPF4B-202ENST00000461612 TATP17735 454 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-202ENST00000461612 GPC6Q9Y625 555 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-202ENST00000461612 SENP3-EIF4A1A0A087X0R7 540 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 CARNS1A5YM72 827 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 BRD1O95696 1058 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 F11P03951 625 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 GMCL1Q96IK5 515 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 MTMR7Q9Y216 660 aa8.14□□□□□ -1.11
PRPF4B-202ENST00000461612 LBRQ14739 615 aaKnown RBP8.13□□□□□ -1.11
PRPF4B-202ENST00000461612 NPAS3Q8IXF0 933 aa8.13□□□□□ -1.11
PRPF4B-202ENST00000461612 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
PRPF4B-202ENST00000461612 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
PRPF4B-202ENST00000461612 H7C1W4 665 aa8.12□□□□□ -1.11
PRPF4B-202ENST00000461612 MSX1P28360 303 aa8.12□□□□□ -1.11
PRPF4B-202ENST00000461612 HIF1AQ16665 826 aa8.12□□□□□ -1.11
PRPF4B-202ENST00000461612 ALDH16A1Q8IZ83 802 aa8.12□□□□□ -1.11
PRPF4B-202ENST00000461612 MYO19Q96H55 970 aa8.12□□□□□ -1.11
PRPF4B-202ENST00000461612 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
PRPF4B-202ENST00000461612 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 ARID4AP29374 1257 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 TXLNAP40222 546 aa8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 PHLDB3Q6NSJ2 640 aa8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 PHACTR1Q9C0D0 580 aa8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 CRISPLD1Q9H336 500 aa8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 NXF1Q9UBU9 619 aaKnown RBP8.11□□□□□ -1.11
PRPF4B-202ENST00000461612 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
PRPF4B-202ENST00000461612 RTN1Q16799 776 aa8.1□□□□□ -1.11
PRPF4B-202ENST00000461612 PGBD3Q8N328 593 aa8.1□□□□□ -1.11
PRPF4B-202ENST00000461612 C7orf43Q8WVR3 580 aa8.1□□□□□ -1.11
PRPF4B-202ENST00000461612 ATP4AP20648 1035 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 ITGA6P23229 1130 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 NLRP8Q86W28 1048 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 ZIC5Q96T25 663 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 ANKIB1Q9P2G1 1089 aa8.09□□□□□ -1.11
PRPF4B-202ENST00000461612 KCNA1Q09470 495 aa8.08□□□□□ -1.12
PRPF4B-202ENST00000461612 ARSJQ5FYB0 599 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-202ENST00000461612 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
PRPF4B-202ENST00000461612 RIPOR1Q6ZS17 1223 aa8.08□□□□□ -1.12
PRPF4B-202ENST00000461612 TRIM22Q8IYM9 498 aa8.08□□□□□ -1.12
PRPF4B-202ENST00000461612 RHPN1Q8TCX5 695 aa8.08□□□□□ -1.12
PRPF4B-202ENST00000461612 C11orf91Q3C1V1 193 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 C16orf46Q6P387 395 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 TXNDC2Q86VQ3 553 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 NANOS1Q8WY41 292 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 NGLY1Q96IV0 654 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 QTRT2Q9H974 415 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 GPAMQ9HCL2 828 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 NEUROD4Q9HD90 331 aa8.07□□□□□ -1.12
PRPF4B-202ENST00000461612 A0A1W2PNR3 127 aa8.06□□□□□ -1.12
PRPF4B-202ENST00000461612 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
PRPF4B-202ENST00000461612 NUCKS1Q9H1E3 243 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-202ENST00000461612 RUBCNLQ9H714 662 aa8.06□□□□□ -1.12
PRPF4B-202ENST00000461612 GNEQ9Y223 722 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-202ENST00000461612 GJA3Q9Y6H8 435 aa8.06□□□□□ -1.12
PRPF4B-202ENST00000461612 DBN1Q16643 649 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms