RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 CD33P20138 364 aa8.68□□□□□ -1.02
CCT4-203ENST00000461540 TRIM28Q13263 835 aaKnown RBP8.68□□□□□ -1.02
CCT4-203ENST00000461540 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
CCT4-203ENST00000461540 RHBDD1Q8TEB9 315 aa8.68□□□□□ -1.02
CCT4-203ENST00000461540 XAGE2Q96GT9 111 aa8.68□□□□□ -1.02
CCT4-203ENST00000461540 DNAAF2Q9NVR5 837 aaKnown RBP8.68□□□□□ -1.02
CCT4-203ENST00000461540 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
CCT4-203ENST00000461540 DCDC2BA2VCK2 349 aa8.67□□□□□ -1.02
CCT4-203ENST00000461540 MAPTP10636 758 aaKnown RBP8.67□□□□□ -1.02
CCT4-203ENST00000461540 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
CCT4-203ENST00000461540 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
CCT4-203ENST00000461540 ELOA3DA6NLF2 546 aaPredicted RBP8.66□□□□□ -1.02
CCT4-203ENST00000461540 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
CCT4-203ENST00000461540 ELOA3BQ3SY89 546 aa8.66□□□□□ -1.02
CCT4-203ENST00000461540 ZNF468Q5VIY5 522 aaPredicted RBP8.66□□□□□ -1.02
CCT4-203ENST00000461540 ELOA3Q8NG57 546 aa8.66□□□□□ -1.02
CCT4-203ENST00000461540 MCCD1P59942 119 aaPredicted RBP8.65□□□□□ -1.02
CCT4-203ENST00000461540 TNP2Q05952 138 aa8.65□□□□□ -1.02
CCT4-203ENST00000461540 ESCO1Q5FWF5 840 aa8.65□□□□□ -1.02
CCT4-203ENST00000461540 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCT4-203ENST00000461540 KHNYNO15037 678 aaKnown RBP8.64□□□□□ -1.03
CCT4-203ENST00000461540 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
CCT4-203ENST00000461540 FBXO45P0C2W1 286 aa8.64□□□□□ -1.03
CCT4-203ENST00000461540 ELNP15502 786 aa8.64□□□□□ -1.03
CCT4-203ENST00000461540 GRIK4Q16099 956 aa8.64□□□□□ -1.03
CCT4-203ENST00000461540 PROCA1Q8NCQ7 364 aaPredicted RBP8.64□□□□□ -1.03
CCT4-203ENST00000461540 C1orf216Q8TAB5 229 aa8.64□□□□□ -1.03
CCT4-203ENST00000461540 ZNF592Q92610 1267 aa8.64□□□□□ -1.03
CCT4-203ENST00000461540 PLA2G4AP47712 749 aa8.63□□□□□ -1.03
CCT4-203ENST00000461540 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
CCT4-203ENST00000461540 COL17A1Q9UMD9 1497 aaPredicted RBP8.63□□□□□ -1.03
CCT4-203ENST00000461540 C9orf172C9J069 976 aa8.62□□□□□ -1.03
CCT4-203ENST00000461540 HCN2Q9UL51 889 aa8.62□□□□□ -1.03
CCT4-203ENST00000461540 M0R082 166 aa8.6□□□□□ -1.03
CCT4-203ENST00000461540 ATP4AP20648 1035 aa8.6□□□□□ -1.03
CCT4-203ENST00000461540 ARSJQ5FYB0 599 aaPredicted RBP8.6□□□□□ -1.03
CCT4-203ENST00000461540 ZNF417Q8TAU3 575 aa8.6□□□□□ -1.03
CCT4-203ENST00000461540 AIDAQ96BJ3 306 aa8.6□□□□□ -1.03
CCT4-203ENST00000461540 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
CCT4-203ENST00000461540 ZNF587Q96SQ5 575 aaPredicted RBP8.6□□□□□ -1.03
CCT4-203ENST00000461540 TRIM34Q9BYJ4 488 aa8.6□□□□□ -1.03
CCT4-203ENST00000461540 ADGRE1Q14246 886 aa8.59□□□□□ -1.03
CCT4-203ENST00000461540 TLR1Q15399 786 aa8.59□□□□□ -1.03
CCT4-203ENST00000461540 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
CCT4-203ENST00000461540 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
CCT4-203ENST00000461540 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
CCT4-203ENST00000461540 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
CCT4-203ENST00000461540 TP53INP1Q96A56 240 aa8.58□□□□□ -1.04
CCT4-203ENST00000461540 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
CCT4-203ENST00000461540 FAM157BP0CG42 384 aa8.57□□□□□ -1.04
CCT4-203ENST00000461540 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
CCT4-203ENST00000461540 PRDM6Q9NQX0 595 aa8.57□□□□□ -1.04
CCT4-203ENST00000461540 RNF112Q9ULX5 631 aa8.57□□□□□ -1.04
CCT4-203ENST00000461540 ZNF330Q9Y3S2 320 aaPredicted RBP8.57□□□□□ -1.04
CCT4-203ENST00000461540 SYT9Q86SS6 491 aa8.56□□□□□ -1.04
CCT4-203ENST00000461540 GJA3Q9Y6H8 435 aa8.56□□□□□ -1.04
CCT4-203ENST00000461540 NRG1Q02297 640 aaPredicted RBP8.55□□□□□ -1.04
CCT4-203ENST00000461540 FZD5Q13467 585 aa8.54□□□□□ -1.04
CCT4-203ENST00000461540 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
CCT4-203ENST00000461540 NIFKQ9BYG3 293 aaKnown RBP8.54□□□□□ -1.04
CCT4-203ENST00000461540 SIN3BO75182 1162 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 NID1P14543 1247 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 SELPP16109 830 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 NR1H3Q13133 447 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 LAMC2Q13753 1193 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 MICALL1Q8N3F8 863 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 MDFIQ99750 246 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
CCT4-203ENST00000461540 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 PCMTD2Q9NV79 361 aa8.53□□□□□ -1.04
CCT4-203ENST00000461540 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.05
CCT4-203ENST00000461540 ALBP02768 609 aa8.52□□□□□ -1.05
CCT4-203ENST00000461540 TATP17735 454 aaPredicted RBP8.52□□□□□ -1.05
CCT4-203ENST00000461540 C8orf86Q6ZUL3 223 aa8.52□□□□□ -1.05
CCT4-203ENST00000461540 IRAK1P51617 712 aa8.51□□□□□ -1.05
CCT4-203ENST00000461540 LENG1Q96BZ8 264 aaPredicted RBP8.51□□□□□ -1.05
CCT4-203ENST00000461540 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
CCT4-203ENST00000461540 STARD13Q9Y3M8 1113 aa8.51□□□□□ -1.05
CCT4-203ENST00000461540 RFC5P40937 340 aa8.5□□□□□ -1.05
CCT4-203ENST00000461540 ARID1BQ8NFD5 2236 aaPredicted RBP8.5□□□□□ -1.05
CCT4-203ENST00000461540 STAU1O95793 577 aaKnown RBP8.49□□□□□ -1.05
CCT4-203ENST00000461540 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
CCT4-203ENST00000461540 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
CCT4-203ENST00000461540 EFSO43281 561 aa8.48□□□□□ -1.05
CCT4-203ENST00000461540 TNFRSF25Q93038 417 aa8.48□□□□□ -1.05
CCT4-203ENST00000461540 CCDC85AQ96PX6 553 aaPredicted RBP8.48□□□□□ -1.05
CCT4-203ENST00000461540 ZIC5Q96T25 663 aa8.48□□□□□ -1.05
CCT4-203ENST00000461540 USP21Q9UK80 565 aa8.48□□□□□ -1.05
CCT4-203ENST00000461540 RAC1P63000 192 aa8.47□□□□□ -1.05
CCT4-203ENST00000461540 USP4Q13107 963 aa8.47□□□□□ -1.05
CCT4-203ENST00000461540 SHISA2Q6UWI4 295 aa8.47□□□□□ -1.05
CCT4-203ENST00000461540 ZDHHC3Q9NYG2 299 aa8.47□□□□□ -1.05
CCT4-203ENST00000461540 A0A0A0MRY4 1105 aa8.46□□□□□ -1.06
CCT4-203ENST00000461540 BICDL1Q6ZP65 573 aa8.46□□□□□ -1.06
CCT4-203ENST00000461540 RNF114Q9Y508 228 aa8.46□□□□□ -1.06
CCT4-203ENST00000461540 LILRB5O75023 590 aa8.45□□□□□ -1.06
CCT4-203ENST00000461540 ADH7P40394 386 aa8.45□□□□□ -1.06
CCT4-203ENST00000461540 SSBP4Q9BWG4 385 aaPredicted RBP8.45□□□□□ -1.06
CCT4-203ENST00000461540 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms