RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
SYN3-206ENST00000461446 GYS1P13807 737 aa13.34□□□□□ -0.27
SYN3-206ENST00000461446 YY1P25490 414 aa13.34□□□□□ -0.27
SYN3-206ENST00000461446 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
SYN3-206ENST00000461446 GPR162Q16538 588 aa13.34□□□□□ -0.27
SYN3-206ENST00000461446 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
SYN3-206ENST00000461446 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
SYN3-206ENST00000461446 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
SYN3-206ENST00000461446 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.28
SYN3-206ENST00000461446 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
SYN3-206ENST00000461446 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
SYN3-206ENST00000461446 UTRNP46939 3433 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 CICQ96RK0 1608 aaPredicted RBP13.32□□□□□ -0.28
SYN3-206ENST00000461446 YBX3P16989 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYN3-206ENST00000461446 FKBP8Q14318 412 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
SYN3-206ENST00000461446 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
SYN3-206ENST00000461446 C4AP0C0L4 1744 aa13.31□□□□□ -0.28
SYN3-206ENST00000461446 CANXP27824 592 aaKnown RBP13.31□□□□□ -0.28
SYN3-206ENST00000461446 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
SYN3-206ENST00000461446 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
SYN3-206ENST00000461446 STARD3NLO95772 234 aa13.3□□□□□ -0.28
SYN3-206ENST00000461446 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
SYN3-206ENST00000461446 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
SYN3-206ENST00000461446 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
SYN3-206ENST00000461446 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
SYN3-206ENST00000461446 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
SYN3-206ENST00000461446 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
SYN3-206ENST00000461446 TAF7Q15545 349 aaPredicted RBP13.29□□□□□ -0.28
SYN3-206ENST00000461446 CCDC27Q2M243 656 aa13.29□□□□□ -0.28
SYN3-206ENST00000461446 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
SYN3-206ENST00000461446 GOLGB1Q14789 3259 aaKnown RBP13.28□□□□□ -0.28
SYN3-206ENST00000461446 ZPR1O75312 459 aa13.28□□□□□ -0.28
SYN3-206ENST00000461446 A1BGP04217 495 aa13.28□□□□□ -0.28
SYN3-206ENST00000461446 DDR1Q08345 913 aa13.28□□□□□ -0.28
SYN3-206ENST00000461446 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
SYN3-206ENST00000461446 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
SYN3-206ENST00000461446 COL15A1P39059 1388 aa13.28□□□□□ -0.28
SYN3-206ENST00000461446 PIP4K2AP48426 406 aaPredicted RBP13.27□□□□□ -0.29
SYN3-206ENST00000461446 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
SYN3-206ENST00000461446 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.29
SYN3-206ENST00000461446 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
SYN3-206ENST00000461446 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
SYN3-206ENST00000461446 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
SYN3-206ENST00000461446 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
SYN3-206ENST00000461446 TM4SF1P30408 202 aa13.26□□□□□ -0.29
SYN3-206ENST00000461446 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
SYN3-206ENST00000461446 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
SYN3-206ENST00000461446 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
SYN3-206ENST00000461446 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
SYN3-206ENST00000461446 NFIXQ14938 502 aa13.25□□□□□ -0.29
SYN3-206ENST00000461446 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
SYN3-206ENST00000461446 TBC1D2BQ9UPU7 963 aa13.25□□□□□ -0.29
SYN3-206ENST00000461446 C10orf71Q711Q0 1435 aa13.24□□□□□ -0.29
SYN3-206ENST00000461446 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
SYN3-206ENST00000461446 GRIN3BO60391 1043 aa13.24□□□□□ -0.29
SYN3-206ENST00000461446 DPEP1P16444 411 aa13.24□□□□□ -0.29
SYN3-206ENST00000461446 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 CHD4Q14839 1912 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 CHL1O00533 1208 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
SYN3-206ENST00000461446 TGFB2P61812 414 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 BICDL1Q6ZP65 573 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 WDR63Q8IWG1 891 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 KIF13BQ9NQT8 1826 aa13.23□□□□□ -0.29
SYN3-206ENST00000461446 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
SYN3-206ENST00000461446 A0A087WZG4 1122 aa13.22□□□□□ -0.29
SYN3-206ENST00000461446 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
SYN3-206ENST00000461446 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
SYN3-206ENST00000461446 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
SYN3-206ENST00000461446 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
SYN3-206ENST00000461446 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
SYN3-206ENST00000461446 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
SYN3-206ENST00000461446 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
SYN3-206ENST00000461446 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
SYN3-206ENST00000461446 IL16Q14005 1332 aa13.21□□□□□ -0.29
SYN3-206ENST00000461446 ZNF521Q96K83 1311 aa13.21□□□□□ -0.29
SYN3-206ENST00000461446 KCNA3P22001 575 aa13.21□□□□□ -0.29
SYN3-206ENST00000461446 CHRNA5P30532 468 aa13.21□□□□□ -0.29
SYN3-206ENST00000461446 EIF4A1P60842 406 aaKnown RBP13.21□□□□□ -0.29
SYN3-206ENST00000461446 GNAI1P63096 354 aa13.21□□□□□ -0.29
SYN3-206ENST00000461446 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
SYN3-206ENST00000461446 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.3
SYN3-206ENST00000461446 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
SYN3-206ENST00000461446 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
SYN3-206ENST00000461446 SERPINB2P05120 415 aa13.2□□□□□ -0.3
SYN3-206ENST00000461446 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
SYN3-206ENST00000461446 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
SYN3-206ENST00000461446 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
SYN3-206ENST00000461446 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
SYN3-206ENST00000461446 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
SYN3-206ENST00000461446 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYN3-206ENST00000461446 CCDC24Q8N4L8 307 aa13.18□□□□□ -0.3
SYN3-206ENST00000461446 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms