RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 PNPLA7Q6ZV29 1317 aa10.71□□□□□ -0.69
SND1-202ENST00000461056 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
SND1-202ENST00000461056 FMNL2Q96PY5 1086 aa10.71□□□□□ -0.69
SND1-202ENST00000461056 PDGFDQ9GZP0 370 aaPredicted RBP10.71□□□□□ -0.69
SND1-202ENST00000461056 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
SND1-202ENST00000461056 TAF1LQ8IZX4 1826 aa10.7□□□□□ -0.7
SND1-202ENST00000461056 GIGYF1O75420 1035 aaPredicted RBP10.7□□□□□ -0.7
SND1-202ENST00000461056 ATP6V1AP38606 617 aa10.7□□□□□ -0.7
SND1-202ENST00000461056 POLA2Q14181 598 aa10.7□□□□□ -0.7
SND1-202ENST00000461056 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
SND1-202ENST00000461056 WDR63Q8IWG1 891 aa10.7□□□□□ -0.7
SND1-202ENST00000461056 RBM42Q9BTD8 480 aaKnown RBP10.7□□□□□ -0.7
SND1-202ENST00000461056 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
SND1-202ENST00000461056 CRKLP46109 303 aaKnown RBP10.69□□□□□ -0.7
SND1-202ENST00000461056 KRT24Q2M2I5 525 aa10.69□□□□□ -0.7
SND1-202ENST00000461056 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
SND1-202ENST00000461056 TTC5Q8N0Z6 440 aa10.69□□□□□ -0.7
SND1-202ENST00000461056 TSPYL4Q9UJ04 414 aa10.69□□□□□ -0.7
SND1-202ENST00000461056 QSER1Q2KHR3 1735 aa10.69□□□□□ -0.7
SND1-202ENST00000461056 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
SND1-202ENST00000461056 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 FANCIQ9NVI1 1328 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 NBPF26B4DH59 902 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 SNRPA1P09661 255 aaKnown RBP10.68□□□□□ -0.7
SND1-202ENST00000461056 GNAI1P63096 354 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
SND1-202ENST00000461056 R3HDM1Q15032 1099 aaKnown RBP10.68□□□□□ -0.7
SND1-202ENST00000461056 NBPF14Q5TI25 921 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 NBPF10Q6P3W6 841 aaKnown RBP10.68□□□□□ -0.7
SND1-202ENST00000461056 SMIM5Q71RC9 77 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 USP16Q9Y5T5 823 aa10.68□□□□□ -0.7
SND1-202ENST00000461056 RPS6KA4O75676 772 aa10.67□□□□□ -0.7
SND1-202ENST00000461056 EIF5P55010 431 aaKnown RBP10.67□□□□□ -0.7
SND1-202ENST00000461056 PDIA6Q15084 440 aa10.67□□□□□ -0.7
SND1-202ENST00000461056 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
SND1-202ENST00000461056 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
SND1-202ENST00000461056 ZBTB1Q9Y2K1 713 aa10.67□□□□□ -0.7
SND1-202ENST00000461056 UBR3Q6ZT12 1888 aa10.67□□□□□ -0.7
SND1-202ENST00000461056 KAT6BQ8WYB5 2073 aa10.66□□□□□ -0.7
SND1-202ENST00000461056 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
SND1-202ENST00000461056 HOXB7P09629 217 aa10.66□□□□□ -0.7
SND1-202ENST00000461056 SSFA2P28290 1259 aa10.66□□□□□ -0.7
SND1-202ENST00000461056 COL23A1Q86Y22 540 aaPredicted RBP10.66□□□□□ -0.7
SND1-202ENST00000461056 C8orf58Q8NAV2 365 aa10.66□□□□□ -0.7
SND1-202ENST00000461056 TSR2Q969E8 191 aaKnown RBP10.66□□□□□ -0.7
SND1-202ENST00000461056 SGIP1Q9BQI5 828 aa10.66□□□□□ -0.7
SND1-202ENST00000461056 TEX13AQ9BXU3 409 aaPredicted RBP10.66□□□□□ -0.7
SND1-202ENST00000461056 LAMB4A4D0S4 1761 aa10.65□□□□□ -0.7
SND1-202ENST00000461056 COL24A1Q17RW2 1714 aa10.65□□□□□ -0.7
SND1-202ENST00000461056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.65□□□□□ -0.7
SND1-202ENST00000461056 GNPATO15228 680 aa10.65□□□□□ -0.7
SND1-202ENST00000461056 A1BGP04217 495 aa10.65□□□□□ -0.7
SND1-202ENST00000461056 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
SND1-202ENST00000461056 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
SND1-202ENST00000461056 ERBB4Q15303 1308 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 STARD3NLO95772 234 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
SND1-202ENST00000461056 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 CDCA7LQ96GN5 454 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 AK7Q96M32 723 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 TFCP2L1Q9NZI6 479 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 COL15A1P39059 1388 aa10.64□□□□□ -0.71
SND1-202ENST00000461056 ZBED9Q6R2W3 1325 aa10.63□□□□□ -0.71
SND1-202ENST00000461056 IL6STP40189 918 aaPredicted RBP10.63□□□□□ -0.71
SND1-202ENST00000461056 PTGER2P43116 358 aa10.63□□□□□ -0.71
SND1-202ENST00000461056 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
SND1-202ENST00000461056 DUSP27Q5VZP5 1158 aa10.63□□□□□ -0.71
SND1-202ENST00000461056 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
SND1-202ENST00000461056 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
SND1-202ENST00000461056 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
SND1-202ENST00000461056 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
SND1-202ENST00000461056 E9PSI1 815 aa10.62□□□□□ -0.71
SND1-202ENST00000461056 PIP4K2AP48426 406 aaPredicted RBP10.62□□□□□ -0.71
SND1-202ENST00000461056 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
SND1-202ENST00000461056 FLAD1Q8NFF5 587 aa10.62□□□□□ -0.71
SND1-202ENST00000461056 LAS1LQ9Y4W2 734 aaKnown RBP10.62□□□□□ -0.71
SND1-202ENST00000461056 RGL2O15211 777 aa10.61□□□□□ -0.71
SND1-202ENST00000461056 VAMP4O75379 141 aa10.61□□□□□ -0.71
SND1-202ENST00000461056 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
SND1-202ENST00000461056 GYS1P13807 737 aa10.61□□□□□ -0.71
SND1-202ENST00000461056 SLC16A10Q8TF71 515 aa10.61□□□□□ -0.71
SND1-202ENST00000461056 SRP68Q9UHB9 627 aaKnown RBP10.61□□□□□ -0.71
SND1-202ENST00000461056 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
SND1-202ENST00000461056 LRP5O75197 1615 aa10.61□□□□□ -0.71
SND1-202ENST00000461056 SCN7AQ01118 1682 aa10.6□□□□□ -0.71
SND1-202ENST00000461056 GOLGB1Q14789 3259 aaKnown RBP10.6□□□□□ -0.71
SND1-202ENST00000461056 PHF14O94880 888 aa10.6□□□□□ -0.71
SND1-202ENST00000461056 CANXP27824 592 aaKnown RBP10.6□□□□□ -0.71
SND1-202ENST00000461056 HNRNPUQ00839 825 aaKnown RBP eCLIP10.6□□□□□ -0.71
SND1-202ENST00000461056 EXOSC9Q06265 439 aaKnown RBP10.6□□□□□ -0.71
SND1-202ENST00000461056 MTFR1LQ9H019 292 aa10.6□□□□□ -0.71
SND1-202ENST00000461056 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
SND1-202ENST00000461056 NARFQ9UHQ1 456 aa10.6□□□□□ -0.71
SND1-202ENST00000461056 ZBTB7AO95365 584 aa10.59□□□□□ -0.71
SND1-202ENST00000461056 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
SND1-202ENST00000461056 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
SND1-202ENST00000461056 DDX21Q9NR30 783 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■■■■■ 34.3
SND1-202ENST00000461056 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
SND1-202ENST00000461056 ANXA1P04083 346 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms