RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 ASXL1Q8IXJ9 1541 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 CHD2O14647 1828 aaKnown RBP8.18□□□□□ -1.1
NUP98-208ENST00000461047 MOXD2PA6NHM9 499 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 UBAP1LF5GYI3 381 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 TRIM32Q13049 653 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 ESCO1Q5FWF5 840 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
NUP98-208ENST00000461047 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 ATAD2Q6PL18 1390 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 PLEKHH1Q9ULM0 1364 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 IQSEC2Q5JU85 1478 aa8.18□□□□□ -1.1
NUP98-208ENST00000461047 NDUFV2P19404 249 aa8.17□□□□□ -1.1
NUP98-208ENST00000461047 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
NUP98-208ENST00000461047 TESK2Q96S53 571 aa8.17□□□□□ -1.1
NUP98-208ENST00000461047 SLC24A3Q9HC58 644 aa8.17□□□□□ -1.1
NUP98-208ENST00000461047 XRN1Q8IZH2 1706 aaKnown RBP8.17□□□□□ -1.1
NUP98-208ENST00000461047 TTC24A2A3L6 582 aaPredicted RBP8.16□□□□□ -1.1
NUP98-208ENST00000461047 SPDYE5A6NIY4 337 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 SETD1AO15047 1707 aaKnown RBP8.16□□□□□ -1.1
NUP98-208ENST00000461047 PSME1Q06323 249 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 PDE4DQ08499 809 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 KNDC1Q76NI1 1749 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 HDGFL2Q7Z4V5 671 aaPredicted RBP8.16□□□□□ -1.1
NUP98-208ENST00000461047 NGDNQ8NEJ9 315 aaKnown RBP8.16□□□□□ -1.1
NUP98-208ENST00000461047 NUDT12Q9BQG2 462 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 TBC1D2Q9BYX2 928 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 PKD2L1Q9P0L9 805 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
NUP98-208ENST00000461047 LTBP4Q8N2S1 1624 aa8.15□□□□□ -1.1
NUP98-208ENST00000461047 ANKARQ7Z5J8 1434 aa8.15□□□□□ -1.1
NUP98-208ENST00000461047 NINLQ9Y2I6 1382 aa8.15□□□□□ -1.1
NUP98-208ENST00000461047 MS4A1P11836 297 aa8.15□□□□□ -1.1
NUP98-208ENST00000461047 MTMR2Q13614 643 aa8.15□□□□□ -1.1
NUP98-208ENST00000461047 LCE2BO14633 110 aa8.14□□□□□ -1.11
NUP98-208ENST00000461047 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
NUP98-208ENST00000461047 CABP1Q9NZU7 370 aa8.14□□□□□ -1.11
NUP98-208ENST00000461047 NPHP3Q7Z494 1330 aa8.13□□□□□ -1.11
NUP98-208ENST00000461047 PLEKHG3A1L390 1219 aa8.13□□□□□ -1.11
NUP98-208ENST00000461047 WNT7AO00755 349 aa8.13□□□□□ -1.11
NUP98-208ENST00000461047 GJA5P36382 358 aa8.13□□□□□ -1.11
NUP98-208ENST00000461047 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
NUP98-208ENST00000461047 CCNYL3P0C7X3 344 aa8.12□□□□□ -1.11
NUP98-208ENST00000461047 MYT1Q01538 1121 aa8.12□□□□□ -1.11
NUP98-208ENST00000461047 RSBN1LQ6PCB5 846 aaPredicted RBP8.12□□□□□ -1.11
NUP98-208ENST00000461047 PRR7Q8TB68 274 aa8.12□□□□□ -1.11
NUP98-208ENST00000461047 PMFBP1Q8TBY8 1022 aa8.12□□□□□ -1.11
NUP98-208ENST00000461047 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
NUP98-208ENST00000461047 CDC42BPGQ6DT37 1551 aa8.12□□□□□ -1.11
NUP98-208ENST00000461047 ARHGEF28Q8N1W1 1705 aaKnown RBP8.12□□□□□ -1.11
NUP98-208ENST00000461047 BRD4O60885 1362 aaPredicted RBP8.11□□□□□ -1.11
NUP98-208ENST00000461047 DISP3Q9P2K9 1392 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 KIF7Q2M1P5 1343 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 ADGRB2O60241 1585 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 FOXO3O43524 673 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 WNT7BP56706 349 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 BRINP3Q76B58 766 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 KRT28Q7Z3Y7 464 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 SLC12A5Q9H2X9 1139 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 TULP4Q9NRJ4 1543 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 C1orf167Q5SNV9 1468 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 QRICH2Q9H0J4 1663 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 PPIP5K1Q6PFW1 1433 aa8.11□□□□□ -1.11
NUP98-208ENST00000461047 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 ACEP12821 1306 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 PTPRNQ16849 979 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
NUP98-208ENST00000461047 FBXO41Q8TF61 875 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 LRRC59Q96AG4 307 aaKnown RBP8.1□□□□□ -1.11
NUP98-208ENST00000461047 ZBTB3Q9H5J0 574 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 MST1RQ04912 1400 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 STRCP1A6NGW2 1772 aa8.1□□□□□ -1.11
NUP98-208ENST00000461047 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.09□□□□□ -1.11
NUP98-208ENST00000461047 WASHC2AQ641Q2 1341 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 PRR36Q9H6K5 1346 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 SPTLC1O15269 473 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 CSPP1Q1MSJ5 1256 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 RC3H1Q5TC82 1133 aaKnown RBP8.09□□□□□ -1.11
NUP98-208ENST00000461047 DESI1Q6ICB0 168 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 PANK3Q9H999 370 aa8.09□□□□□ -1.11
NUP98-208ENST00000461047 KTN1Q86UP2 1357 aaKnown RBP8.09□□□□□ -1.12
NUP98-208ENST00000461047 CGNL1Q0VF96 1302 aa8.08□□□□□ -1.12
NUP98-208ENST00000461047 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
NUP98-208ENST00000461047 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
NUP98-208ENST00000461047 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
NUP98-208ENST00000461047 NUTM2AQ8IVF1 878 aaPredicted RBP8.08□□□□□ -1.12
NUP98-208ENST00000461047 ANKRD36BQ8N2N9 1353 aa8.08□□□□□ -1.12
NUP98-208ENST00000461047 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 AXIN1O15169 862 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 DDX10Q13206 875 aaKnown RBP8.07□□□□□ -1.12
NUP98-208ENST00000461047 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
NUP98-208ENST00000461047 NLRP13Q86W25 1043 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 ABTB2Q8N961 1025 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 EVA1BQ9NVM1 165 aa8.07□□□□□ -1.12
NUP98-208ENST00000461047 PCDHB15Q9Y5E8 787 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms