RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 KRT24Q2M2I5 525 aa13.31□□□□□ -0.28
GARNL3-211ENST00000460176 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
GARNL3-211ENST00000460176 PROM2Q8N271 834 aa13.31□□□□□ -0.28
GARNL3-211ENST00000460176 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
GARNL3-211ENST00000460176 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
GARNL3-211ENST00000460176 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
GARNL3-211ENST00000460176 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
GARNL3-211ENST00000460176 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
GARNL3-211ENST00000460176 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
GARNL3-211ENST00000460176 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
GARNL3-211ENST00000460176 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 KCNQ4P56696 695 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 ITPK1Q13572 414 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 EZH2Q15910 746 aaKnown RBP13.29□□□□□ -0.28
GARNL3-211ENST00000460176 SLC27A3Q5K4L6 730 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-211ENST00000460176 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
GARNL3-211ENST00000460176 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-211ENST00000460176 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
GARNL3-211ENST00000460176 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
GARNL3-211ENST00000460176 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
GARNL3-211ENST00000460176 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
GARNL3-211ENST00000460176 MYH14Q7Z406 1995 aaKnown RBP13.28□□□□□ -0.28
GARNL3-211ENST00000460176 TSPYL6Q8N831 410 aa13.27□□□□□ -0.29
GARNL3-211ENST00000460176 LINC00116Q8NCU8 138 aa13.27□□□□□ -0.29
GARNL3-211ENST00000460176 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.29
GARNL3-211ENST00000460176 HOXB7P09629 217 aa13.26□□□□□ -0.29
GARNL3-211ENST00000460176 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-211ENST00000460176 QSER1Q2KHR3 1735 aa13.26□□□□□ -0.29
GARNL3-211ENST00000460176 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
GARNL3-211ENST00000460176 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-211ENST00000460176 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-211ENST00000460176 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-211ENST00000460176 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
GARNL3-211ENST00000460176 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-211ENST00000460176 C4AP0C0L4 1744 aa13.24□□□□□ -0.29
GARNL3-211ENST00000460176 VAMP4O75379 141 aa13.23□□□□□ -0.29
GARNL3-211ENST00000460176 STARD3NLO95772 234 aa13.23□□□□□ -0.29
GARNL3-211ENST00000460176 A1BGP04217 495 aa13.23□□□□□ -0.29
GARNL3-211ENST00000460176 POLA2Q14181 598 aa13.23□□□□□ -0.29
GARNL3-211ENST00000460176 INTS5Q6P9B9 1019 aaKnown RBP13.23□□□□□ -0.29
GARNL3-211ENST00000460176 CACNA1FO60840 1977 aa13.22□□□□□ -0.29
GARNL3-211ENST00000460176 SOCS7O14512 581 aa13.22□□□□□ -0.29
GARNL3-211ENST00000460176 CRKLP46109 303 aaKnown RBP13.22□□□□□ -0.29
GARNL3-211ENST00000460176 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
GARNL3-211ENST00000460176 HDGFL1Q5TGJ6 251 aa13.22□□□□□ -0.29
GARNL3-211ENST00000460176 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
GARNL3-211ENST00000460176 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
GARNL3-211ENST00000460176 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
GARNL3-211ENST00000460176 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
GARNL3-211ENST00000460176 ZNF827Q17R98 1081 aa13.21□□□□□ -0.29
GARNL3-211ENST00000460176 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
GARNL3-211ENST00000460176 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
GARNL3-211ENST00000460176 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
GARNL3-211ENST00000460176 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
GARNL3-211ENST00000460176 HMGB2P26583 209 aaKnown RBP13.2□□□□□ -0.3
GARNL3-211ENST00000460176 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-211ENST00000460176 PDIA6Q15084 440 aa13.2□□□□□ -0.3
GARNL3-211ENST00000460176 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
GARNL3-211ENST00000460176 NBPF10Q6P3W6 841 aaKnown RBP13.2□□□□□ -0.3
GARNL3-211ENST00000460176 AMIGO3Q86WK7 504 aa13.2□□□□□ -0.3
GARNL3-211ENST00000460176 NBPF15Q8N660 670 aa13.2□□□□□ -0.3
GARNL3-211ENST00000460176 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
GARNL3-211ENST00000460176 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-211ENST00000460176 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
GARNL3-211ENST00000460176 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
GARNL3-211ENST00000460176 AK7Q96M32 723 aa13.19□□□□□ -0.3
GARNL3-211ENST00000460176 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
GARNL3-211ENST00000460176 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
GARNL3-211ENST00000460176 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
GARNL3-211ENST00000460176 GNPATO15228 680 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 RPS6KA4O75676 772 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 DSG3P32926 999 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
GARNL3-211ENST00000460176 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 ANXA1P04083 346 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-211ENST00000460176 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
GARNL3-211ENST00000460176 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-211ENST00000460176 COL15A1P39059 1388 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
GARNL3-211ENST00000460176 MYL6BP14649 208 aa13.16□□□□□ -0.3
GARNL3-211ENST00000460176 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
GARNL3-211ENST00000460176 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
GARNL3-211ENST00000460176 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
GARNL3-211ENST00000460176 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
GARNL3-211ENST00000460176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
GARNL3-211ENST00000460176 SSFA2P28290 1259 aa13.15□□□□□ -0.3
GARNL3-211ENST00000460176 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
GARNL3-211ENST00000460176 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
GARNL3-211ENST00000460176 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms