RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 ADCY9O60503 1353 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
NEDD9-205ENST00000459670 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
NEDD9-205ENST00000459670 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 ASAP1Q9ULH1 1129 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
NEDD9-205ENST00000459670 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
NEDD9-205ENST00000459670 NUP98P52948 1817 aa13.37□□□□□ -0.27
NEDD9-205ENST00000459670 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
NEDD9-205ENST00000459670 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
NEDD9-205ENST00000459670 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
NEDD9-205ENST00000459670 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
NEDD9-205ENST00000459670 UBR3Q6ZT12 1888 aa13.37□□□□□ -0.27
NEDD9-205ENST00000459670 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
NEDD9-205ENST00000459670 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
NEDD9-205ENST00000459670 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
NEDD9-205ENST00000459670 FLIIQ13045 1269 aa13.36□□□□□ -0.27
NEDD9-205ENST00000459670 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
NEDD9-205ENST00000459670 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
NEDD9-205ENST00000459670 SEPT12Q8IYM1 358 aa13.36□□□□□ -0.27
NEDD9-205ENST00000459670 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
NEDD9-205ENST00000459670 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
NEDD9-205ENST00000459670 INTS3Q68E01 1043 aaKnown RBP13.35□□□□□ -0.27
NEDD9-205ENST00000459670 TMEM57Q8N5G2 664 aa13.35□□□□□ -0.27
NEDD9-205ENST00000459670 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
NEDD9-205ENST00000459670 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
NEDD9-205ENST00000459670 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
NEDD9-205ENST00000459670 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 IPO8O15397 1037 aaKnown RBP13.34□□□□□ -0.27
NEDD9-205ENST00000459670 KCNQ2O43526 872 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
NEDD9-205ENST00000459670 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
NEDD9-205ENST00000459670 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 TTC5Q8N0Z6 440 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 API5Q9BZZ5 524 aaKnown RBP13.34□□□□□ -0.27
NEDD9-205ENST00000459670 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
NEDD9-205ENST00000459670 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
NEDD9-205ENST00000459670 PALLDQ8WX93 1383 aa13.33□□□□□ -0.27
NEDD9-205ENST00000459670 COL24A1Q17RW2 1714 aa13.33□□□□□ -0.27
NEDD9-205ENST00000459670 LAMB2P55268 1798 aa13.33□□□□□ -0.28
NEDD9-205ENST00000459670 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
NEDD9-205ENST00000459670 KDM2BQ8NHM5 1336 aa13.33□□□□□ -0.28
NEDD9-205ENST00000459670 ANXA1P04083 346 aa13.32□□□□□ -0.28
NEDD9-205ENST00000459670 MS4A1P11836 297 aa13.32□□□□□ -0.28
NEDD9-205ENST00000459670 AAMPQ13685 434 aa13.32□□□□□ -0.28
NEDD9-205ENST00000459670 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
NEDD9-205ENST00000459670 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
NEDD9-205ENST00000459670 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
NEDD9-205ENST00000459670 QSER1Q2KHR3 1735 aa13.31□□□□□ -0.28
NEDD9-205ENST00000459670 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
NEDD9-205ENST00000459670 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
NEDD9-205ENST00000459670 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
NEDD9-205ENST00000459670 ZBTB40Q9NUA8 1239 aa13.31□□□□□ -0.28
NEDD9-205ENST00000459670 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
NEDD9-205ENST00000459670 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
NEDD9-205ENST00000459670 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
NEDD9-205ENST00000459670 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
NEDD9-205ENST00000459670 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
NEDD9-205ENST00000459670 DDX19BQ9UMR2 479 aa13.3□□□□□ -0.28
NEDD9-205ENST00000459670 F6X3S4 739 aa13.29□□□□□ -0.28
NEDD9-205ENST00000459670 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
NEDD9-205ENST00000459670 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
NEDD9-205ENST00000459670 ITPK1Q13572 414 aa13.29□□□□□ -0.28
NEDD9-205ENST00000459670 MYH3P11055 1940 aa13.29□□□□□ -0.28
NEDD9-205ENST00000459670 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
NEDD9-205ENST00000459670 FTSJ3Q8IY81 847 aaKnown RBP13.28□□□□□ -0.28
NEDD9-205ENST00000459670 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
NEDD9-205ENST00000459670 SIK1P57059 783 aa13.27□□□□□ -0.29
NEDD9-205ENST00000459670 BEND3Q5T5X7 828 aa13.27□□□□□ -0.29
NEDD9-205ENST00000459670 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.29
NEDD9-205ENST00000459670 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
NEDD9-205ENST00000459670 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.29
NEDD9-205ENST00000459670 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
NEDD9-205ENST00000459670 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.29
NEDD9-205ENST00000459670 A1BGP04217 495 aa13.26□□□□□ -0.29
NEDD9-205ENST00000459670 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
NEDD9-205ENST00000459670 ITPRIPQ8IWB1 547 aa13.26□□□□□ -0.29
NEDD9-205ENST00000459670 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
NEDD9-205ENST00000459670 COL15A1P39059 1388 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 UTYO14607 1347 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 PI4KAP2A4QPH2 592 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 PIP4K2AP48426 406 aaPredicted RBP13.25□□□□□ -0.29
NEDD9-205ENST00000459670 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
NEDD9-205ENST00000459670 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 INTS5Q6P9B9 1019 aaKnown RBP13.25□□□□□ -0.29
NEDD9-205ENST00000459670 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 PI4KAP1Q8N8J0 262 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 DNAAF4Q8WXU2 420 aa13.25□□□□□ -0.29
NEDD9-205ENST00000459670 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
NEDD9-205ENST00000459670 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms