RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
TRAPPC12-212ENST00000457845 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
TRAPPC12-212ENST00000457845 ANO8Q9HCE9 1232 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC12-212ENST00000457845 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC12-212ENST00000457845 SLC15A2Q16348 729 aa15.27■□□□□ 0.04
TRAPPC12-212ENST00000457845 KRT24Q2M2I5 525 aa15.27■□□□□ 0.04
TRAPPC12-212ENST00000457845 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
TRAPPC12-212ENST00000457845 STARD3NLO95772 234 aa15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 CRKLP46109 303 aaKnown RBP15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 ZNF827Q17R98 1081 aa15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 NBPF14Q5TI25 921 aa15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 INTS5Q6P9B9 1019 aaKnown RBP15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
TRAPPC12-212ENST00000457845 DUSP27Q5VZP5 1158 aa15.25■□□□□ 0.03
TRAPPC12-212ENST00000457845 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
TRAPPC12-212ENST00000457845 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
TRAPPC12-212ENST00000457845 CASZ1Q86V15 1759 aa15.24■□□□□ 0.03
TRAPPC12-212ENST00000457845 RPS6KA4O75676 772 aa15.24■□□□□ 0.03
TRAPPC12-212ENST00000457845 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
TRAPPC12-212ENST00000457845 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
TRAPPC12-212ENST00000457845 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
TRAPPC12-212ENST00000457845 A1BGP04217 495 aa15.23■□□□□ 0.03
TRAPPC12-212ENST00000457845 ZBTB1Q9Y2K1 713 aa15.23■□□□□ 0.03
TRAPPC12-212ENST00000457845 COL24A1Q17RW2 1714 aa15.23■□□□□ 0.03
TRAPPC12-212ENST00000457845 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 VAMP4O75379 141 aa15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 SSFA2P28290 1259 aa15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 TWISTNBQ3B726 338 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 AMIGO3Q86WK7 504 aa15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 AK7Q96M32 723 aa15.22■□□□□ 0.03
TRAPPC12-212ENST00000457845 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 GNPATO15228 680 aa15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 IL6STP40189 918 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 PDIA6Q15084 440 aa15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 TFCP2L1Q9NZI6 479 aa15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
TRAPPC12-212ENST00000457845 ADRA2BP18089 450 aa15.2■□□□□ 0.02
TRAPPC12-212ENST00000457845 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
TRAPPC12-212ENST00000457845 LRP10Q7Z4F1 713 aa15.2■□□□□ 0.02
TRAPPC12-212ENST00000457845 FLAD1Q8NFF5 587 aa15.2■□□□□ 0.02
TRAPPC12-212ENST00000457845 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
TRAPPC12-212ENST00000457845 NUP98P52948 1817 aa15.2■□□□□ 0.02
TRAPPC12-212ENST00000457845 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
TRAPPC12-212ENST00000457845 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
TRAPPC12-212ENST00000457845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 CT47B1P0C2W7 299 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 R3HDM1Q15032 1099 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 DDX21Q9NR30 783 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 COL15A1P39059 1388 aa15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 SCN7AQ01118 1682 aa15.18■□□□□ 0.02
TRAPPC12-212ENST00000457845 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC12-212ENST00000457845 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
TRAPPC12-212ENST00000457845 SMIM5Q71RC9 77 aa15.17■□□□□ 0.02
TRAPPC12-212ENST00000457845 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-212ENST00000457845 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
TRAPPC12-212ENST00000457845 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC12-212ENST00000457845 PROSER3Q2NL68 480 aa15.16■□□□□ 0.02
TRAPPC12-212ENST00000457845 NECTIN2Q92692 538 aa15.16■□□□□ 0.02
TRAPPC12-212ENST00000457845 PDGFDQ9GZP0 370 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC12-212ENST00000457845 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
TRAPPC12-212ENST00000457845 A0A087WZG4 1122 aa15.15■□□□□ 0.02
TRAPPC12-212ENST00000457845 PSDA5PKW4 1024 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC12-212ENST00000457845 SLC16A10Q8TF71 515 aa15.15■□□□□ 0.02
TRAPPC12-212ENST00000457845 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
TRAPPC12-212ENST00000457845 ANKRD36CQ5JPF3 1778 aa15.14■□□□□ 0.01
TRAPPC12-212ENST00000457845 RGL2O15211 777 aa15.14■□□□□ 0.01
TRAPPC12-212ENST00000457845 PHF14O94880 888 aa15.14■□□□□ 0.01
TRAPPC12-212ENST00000457845 ANXA1P04083 346 aa15.14■□□□□ 0.01
TRAPPC12-212ENST00000457845 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
TRAPPC12-212ENST00000457845 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
TRAPPC12-212ENST00000457845 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
TRAPPC12-212ENST00000457845 MYL6BP14649 208 aa15.13■□□□□ 0.01
TRAPPC12-212ENST00000457845 RFC4P35249 363 aa15.13■□□□□ 0.01
TRAPPC12-212ENST00000457845 YTHDC1Q96MU7 727 aaKnown RBP15.13■□□□□ 0.01
TRAPPC12-212ENST00000457845 ALDH1L2Q3SY69 923 aa15.12■□□□□ 0.01
TRAPPC12-212ENST00000457845 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
TRAPPC12-212ENST00000457845 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
TRAPPC12-212ENST00000457845 BCL2L12Q9HB09 334 aa15.12■□□□□ 0.01
TRAPPC12-212ENST00000457845 CAMTA2O94983 1202 aa15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 GYS1P13807 737 aa15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 TTLL7Q6ZT98 887 aa15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 COPS6Q7L5N1 327 aa15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
TRAPPC12-212ENST00000457845 ERVV-1B6SEH8 477 aa15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 ZPR1O75312 459 aa15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 XAGE3Q8WTP9 111 aa15.1■□□□□ 0.01
TRAPPC12-212ENST00000457845 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms