RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TMPOP42166 694 aaKnown RBP30.47■■■□□ 2.47
CBX3-204ENST00000456948 DLG5Q8TDM6 1919 aa30.46■■■□□ 2.47
CBX3-204ENST00000456948 ZPR1O75312 459 aa30.46■■■□□ 2.47
CBX3-204ENST00000456948 CCDC146Q8IYE0 955 aa30.46■■■□□ 2.47
CBX3-204ENST00000456948 SNRPA1P09661 255 aaKnown RBP30.45■■■□□ 2.47
CBX3-204ENST00000456948 A0A087WZG4 1122 aa30.43■■■□□ 2.46
CBX3-204ENST00000456948 KCNQ3O43525 872 aa30.43■■■□□ 2.46
CBX3-204ENST00000456948 CANXP27824 592 aaKnown RBP30.43■■■□□ 2.46
CBX3-204ENST00000456948 SOS1Q07889 1333 aaPredicted RBP30.43■■■□□ 2.46
CBX3-204ENST00000456948 NEUROD2Q15784 382 aa30.42■■■□□ 2.46
CBX3-204ENST00000456948 GPR162Q16538 588 aa30.42■■■□□ 2.46
CBX3-204ENST00000456948 PELP1Q8IZL8 1130 aaKnown RBP30.42■■■□□ 2.46
CBX3-204ENST00000456948 ZBTB1Q9Y2K1 713 aa30.42■■■□□ 2.46
CBX3-204ENST00000456948 CD2APQ9Y5K6 639 aa30.42■■■□□ 2.46
CBX3-204ENST00000456948 NLGN2Q8NFZ4 835 aa30.41■■■□□ 2.46
CBX3-204ENST00000456948 MMP10P09238 476 aa30.4■■■□□ 2.46
CBX3-204ENST00000456948 GYS1P13807 737 aa30.4■■■□□ 2.46
CBX3-204ENST00000456948 BABAM1Q9NWV8 329 aa30.39■■■□□ 2.46
CBX3-204ENST00000456948 MIS18AQ9NYP9 233 aa30.39■■■□□ 2.46
CBX3-204ENST00000456948 PARP3Q9Y6F1 533 aa30.39■■■□□ 2.46
CBX3-204ENST00000456948 USP42Q9H9J4 1324 aaKnown RBP30.39■■■□□ 2.46
CBX3-204ENST00000456948 THUMPD2Q9BTF0 503 aaKnown RBP30.38■■■□□ 2.45
CBX3-204ENST00000456948 RRP7AQ9Y3A4 280 aaKnown RBP30.38■■■□□ 2.45
CBX3-204ENST00000456948 IL6STP40189 918 aaPredicted RBP30.37■■■□□ 2.45
CBX3-204ENST00000456948 NARFQ9UHQ1 456 aa30.37■■■□□ 2.45
CBX3-204ENST00000456948 COL15A1P39059 1388 aa30.37■■■□□ 2.45
CBX3-204ENST00000456948 MRS2Q9HD23 443 aa30.36■■■□□ 2.45
CBX3-204ENST00000456948 TSPYL4Q9UJ04 414 aa30.36■■■□□ 2.45
CBX3-204ENST00000456948 EIF5P55010 431 aaKnown RBP30.35■■■□□ 2.45
CBX3-204ENST00000456948 SRP68Q9UHB9 627 aaKnown RBP30.35■■■□□ 2.45
CBX3-204ENST00000456948 ZNF330Q9Y3S2 320 aaPredicted RBP30.35■■■□□ 2.45
CBX3-204ENST00000456948 USP16Q9Y5T5 823 aa30.34■■■□□ 2.45
CBX3-204ENST00000456948 USPL1Q5W0Q7 1092 aa30.33■■■□□ 2.45
CBX3-204ENST00000456948 A1BGP04217 495 aa30.32■■■□□ 2.44
CBX3-204ENST00000456948 C4AP0C0L4 1744 aa30.31■■■□□ 2.44
CBX3-204ENST00000456948 FKBP8Q14318 412 aa30.31■■■□□ 2.44
CBX3-204ENST00000456948 EIF4A1P60842 406 aaKnown RBP30.3■■■□□ 2.44
CBX3-204ENST00000456948 CALD1Q05682 793 aaKnown RBP30.3■■■□□ 2.44
CBX3-204ENST00000456948 APAF1O14727 1248 aa30.29■■■□□ 2.44
CBX3-204ENST00000456948 GIGYF1O75420 1035 aaPredicted RBP30.28■■■□□ 2.44
CBX3-204ENST00000456948 TRIM35Q9UPQ4 493 aa30.27■■■□□ 2.44
CBX3-204ENST00000456948 CHD4Q14839 1912 aa30.26■■■□□ 2.44
CBX3-204ENST00000456948 PRAMEF22A3QJZ6 481 aa30.26■■■□□ 2.43
CBX3-204ENST00000456948 LAS1LQ9Y4W2 734 aaKnown RBP30.26■■■□□ 2.43
CBX3-204ENST00000456948 UTRNP46939 3433 aa30.25■■■□□ 2.43
CBX3-204ENST00000456948 CCDC184Q52MB2 194 aa30.25■■■□□ 2.43
CBX3-204ENST00000456948 TBC1D2BQ9UPU7 963 aa30.25■■■□□ 2.43
CBX3-204ENST00000456948 KDM3BQ7LBC6 1761 aa30.25■■■□□ 2.43
CBX3-204ENST00000456948 TM4SF1P30408 202 aa30.24■■■□□ 2.43
CBX3-204ENST00000456948 TGFB2P61812 414 aa30.24■■■□□ 2.43
CBX3-204ENST00000456948 DZIP3Q86Y13 1208 aaKnown RBP30.23■■■□□ 2.43
CBX3-204ENST00000456948 CHL1O00533 1208 aa30.22■■■□□ 2.43
CBX3-204ENST00000456948 GRIN3BO60391 1043 aa30.22■■■□□ 2.43
CBX3-204ENST00000456948 ZNF652Q9Y2D9 606 aa30.22■■■□□ 2.43
CBX3-204ENST00000456948 YBX3P16989 372 aaKnown RBP eCLIP30.21■■■□□ 2.43
CBX3-204ENST00000456948 NFIXQ14938 502 aa30.2■■■□□ 2.43
CBX3-204ENST00000456948 CFAP44Q96MT7 982 aa30.2■■■□□ 2.43
CBX3-204ENST00000456948 POLRMTO00411 1230 aaKnown RBP30.19■■■□□ 2.42
CBX3-204ENST00000456948 WWC3Q9ULE0 1092 aa30.19■■■□□ 2.42
CBX3-204ENST00000456948 ERBB4Q15303 1308 aa30.19■■■□□ 2.42
CBX3-204ENST00000456948 DDR1Q08345 913 aa30.18■■■□□ 2.42
CBX3-204ENST00000456948 BCL2L12Q9HB09 334 aa30.18■■■□□ 2.42
CBX3-204ENST00000456948 GOLGB1Q14789 3259 aaKnown RBP30.18■■■□□ 2.42
CBX3-204ENST00000456948 RGL2O15211 777 aa30.17■■■□□ 2.42
CBX3-204ENST00000456948 PIP4K2AP48426 406 aaPredicted RBP30.17■■■□□ 2.42
CBX3-204ENST00000456948 CLEC4GQ6UXB4 293 aa30.17■■■□□ 2.42
CBX3-204ENST00000456948 BICDL1Q6ZP65 573 aa30.17■■■□□ 2.42
CBX3-204ENST00000456948 SETDB2Q96T68 719 aa30.17■■■□□ 2.42
CBX3-204ENST00000456948 NBPF26B4DH59 902 aa30.16■■■□□ 2.42
CBX3-204ENST00000456948 GNAI1P63096 354 aa30.16■■■□□ 2.42
CBX3-204ENST00000456948 NBPF10Q6P3W6 841 aaKnown RBP30.16■■■□□ 2.42
CBX3-204ENST00000456948 NBPF15Q8N660 670 aa30.16■■■□□ 2.42
CBX3-204ENST00000456948 CAMTA2O94983 1202 aa30.15■■■□□ 2.42
CBX3-204ENST00000456948 SERPINB2P05120 415 aa30.15■■■□□ 2.42
CBX3-204ENST00000456948 EIF2S2P20042 333 aaKnown RBP30.15■■■□□ 2.42
CBX3-204ENST00000456948 LAMB4A4D0S4 1761 aa30.15■■■□□ 2.42
CBX3-204ENST00000456948 C10orf71Q711Q0 1435 aa30.14■■■□□ 2.42
CBX3-204ENST00000456948 NPHP1O15259 732 aa30.14■■■□□ 2.42
CBX3-204ENST00000456948 IFT57Q9NWB7 429 aa30.14■■■□□ 2.42
CBX3-204ENST00000456948 NCBP3Q53F19 620 aaKnown RBP30.13■■■□□ 2.41
CBX3-204ENST00000456948 KIF6Q6ZMV9 814 aa30.13■■■□□ 2.41
CBX3-204ENST00000456948 ZNF784Q8NCA9 323 aaPredicted RBP30.13■■■□□ 2.41
CBX3-204ENST00000456948 TBC1D9BQ66K14 1250 aa30.12■■■□□ 2.41
CBX3-204ENST00000456948 NGEFQ8N5V2 710 aa30.12■■■□□ 2.41
CBX3-204ENST00000456948 MYL6BP14649 208 aa30.11■■■□□ 2.41
CBX3-204ENST00000456948 CCDC27Q2M243 656 aa30.11■■■□□ 2.41
CBX3-204ENST00000456948 CHMP4AQ9BY43 222 aa30.11■■■□□ 2.41
CBX3-204ENST00000456948 CARMIL3Q8ND23 1372 aa30.11■■■□□ 2.41
CBX3-204ENST00000456948 KIF13BQ9NQT8 1826 aa30.1■■■□□ 2.41
CBX3-204ENST00000456948 HOXB7P09629 217 aa30.1■■■□□ 2.41
CBX3-204ENST00000456948 A0A0G2JLW4 131 aa30.09■■■□□ 2.41
CBX3-204ENST00000456948 FAM9BQ8IZU0 186 aa30.09■■■□□ 2.41
CBX3-204ENST00000456948 ERVV-1B6SEH8 477 aa30.08■■■□□ 2.41
CBX3-204ENST00000456948 DPEP1P16444 411 aa30.08■■■□□ 2.41
CBX3-204ENST00000456948 MBIPQ9NS73 344 aa30.07■■■□□ 2.4
CBX3-204ENST00000456948 PIM2Q9P1W9 311 aa30.07■■■□□ 2.4
CBX3-204ENST00000456948 PDZRN3Q9UPQ7 1066 aa30.07■■■□□ 2.4
CBX3-204ENST00000456948 SCN7AQ01118 1682 aa30.07■■■□□ 2.4
CBX3-204ENST00000456948 ZNF853P0CG23 659 aa30.06■■■□□ 2.4
CBX3-204ENST00000456948 PXDNLA1KZ92 1463 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms