RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
FAM239A-203ENST00000456563 C4BP0C0L5 1744 aa23.14■■□□□ 1.3
FAM239A-203ENST00000456563 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
FAM239A-203ENST00000456563 DUSP27Q5VZP5 1158 aa23.14■■□□□ 1.29
FAM239A-203ENST00000456563 C8orf58Q8NAV2 365 aa23.14■■□□□ 1.29
FAM239A-203ENST00000456563 STK32BQ9NY57 414 aa23.14■■□□□ 1.29
FAM239A-203ENST00000456563 SLC15A2Q16348 729 aa23.13■■□□□ 1.29
FAM239A-203ENST00000456563 ZNF827Q17R98 1081 aa23.13■■□□□ 1.29
FAM239A-203ENST00000456563 INTS5Q6P9B9 1019 aaKnown RBP23.13■■□□□ 1.29
FAM239A-203ENST00000456563 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
FAM239A-203ENST00000456563 AK7Q96M32 723 aa23.12■■□□□ 1.29
FAM239A-203ENST00000456563 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
FAM239A-203ENST00000456563 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
FAM239A-203ENST00000456563 ELL2O00472 640 aaPredicted RBP23.1■■□□□ 1.29
FAM239A-203ENST00000456563 A1BGP04217 495 aa23.1■■□□□ 1.29
FAM239A-203ENST00000456563 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
FAM239A-203ENST00000456563 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
FAM239A-203ENST00000456563 TWISTNBQ3B726 338 aaPredicted RBP23.09■■□□□ 1.29
FAM239A-203ENST00000456563 TFCP2L1Q9NZI6 479 aa23.09■■□□□ 1.29
FAM239A-203ENST00000456563 ZBTB1Q9Y2K1 713 aa23.09■■□□□ 1.29
FAM239A-203ENST00000456563 ERBB4Q15303 1308 aa23.08■■□□□ 1.29
FAM239A-203ENST00000456563 GNPATO15228 680 aa23.08■■□□□ 1.29
FAM239A-203ENST00000456563 EIF2S2P20042 333 aaKnown RBP23.08■■□□□ 1.29
FAM239A-203ENST00000456563 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.29
FAM239A-203ENST00000456563 MYH14Q7Z406 1995 aaKnown RBP23.07■■□□□ 1.28
FAM239A-203ENST00000456563 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
FAM239A-203ENST00000456563 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
FAM239A-203ENST00000456563 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
FAM239A-203ENST00000456563 VAMP4O75379 141 aa23.06■■□□□ 1.28
FAM239A-203ENST00000456563 CANXP27824 592 aaKnown RBP23.06■■□□□ 1.28
FAM239A-203ENST00000456563 SSFA2P28290 1259 aa23.06■■□□□ 1.28
FAM239A-203ENST00000456563 NBPF26B4DH59 902 aa23.05■■□□□ 1.28
FAM239A-203ENST00000456563 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
FAM239A-203ENST00000456563 NBPF10Q6P3W6 841 aaKnown RBP23.05■■□□□ 1.28
FAM239A-203ENST00000456563 AMIGO3Q86WK7 504 aa23.05■■□□□ 1.28
FAM239A-203ENST00000456563 NBPF15Q8N660 670 aa23.05■■□□□ 1.28
FAM239A-203ENST00000456563 FLAD1Q8NFF5 587 aa23.05■■□□□ 1.28
FAM239A-203ENST00000456563 ADRA2BP18089 450 aa23.04■■□□□ 1.28
FAM239A-203ENST00000456563 EIF5P55010 431 aaKnown RBP23.04■■□□□ 1.28
FAM239A-203ENST00000456563 PNPLA7Q6ZV29 1317 aa23.04■■□□□ 1.28
FAM239A-203ENST00000456563 UBR3Q6ZT12 1888 aa23.03■■□□□ 1.28
FAM239A-203ENST00000456563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.03■■□□□ 1.28
FAM239A-203ENST00000456563 R3HDM1Q15032 1099 aaKnown RBP23.03■■□□□ 1.28
FAM239A-203ENST00000456563 PDIA6Q15084 440 aa23.03■■□□□ 1.28
FAM239A-203ENST00000456563 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
FAM239A-203ENST00000456563 NECTIN2Q92692 538 aa23.03■■□□□ 1.28
FAM239A-203ENST00000456563 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
FAM239A-203ENST00000456563 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
FAM239A-203ENST00000456563 TRAPPC3LQ5T215 181 aa23.02■■□□□ 1.28
FAM239A-203ENST00000456563 DDX21Q9NR30 783 aaKnown RBP eCLIP23.02■■□□□ 1.28
FAM239A-203ENST00000456563 PHF14O94880 888 aa23.01■■□□□ 1.27
FAM239A-203ENST00000456563 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
FAM239A-203ENST00000456563 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
FAM239A-203ENST00000456563 DBF4Q9UBU7 674 aaPredicted RBP23.01■■□□□ 1.27
FAM239A-203ENST00000456563 QSER1Q2KHR3 1735 aa23.01■■□□□ 1.27
FAM239A-203ENST00000456563 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
FAM239A-203ENST00000456563 COL23A1Q86Y22 540 aaPredicted RBP23■■□□□ 1.27
FAM239A-203ENST00000456563 ARHGEF1Q92888 912 aaKnown RBP23■■□□□ 1.27
FAM239A-203ENST00000456563 TUBGCP6Q96RT7 1819 aa23■■□□□ 1.27
FAM239A-203ENST00000456563 COL15A1P39059 1388 aa23■■□□□ 1.27
FAM239A-203ENST00000456563 A0A087WZG4 1122 aa22.99■■□□□ 1.27
FAM239A-203ENST00000456563 MYL6BP14649 208 aa22.99■■□□□ 1.27
FAM239A-203ENST00000456563 PROSER3Q2NL68 480 aa22.99■■□□□ 1.27
FAM239A-203ENST00000456563 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
FAM239A-203ENST00000456563 PSDA5PKW4 1024 aaPredicted RBP22.98■■□□□ 1.27
FAM239A-203ENST00000456563 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
FAM239A-203ENST00000456563 ANXA1P04083 346 aa22.97■■□□□ 1.27
FAM239A-203ENST00000456563 RFC4P35249 363 aa22.97■■□□□ 1.27
FAM239A-203ENST00000456563 STK31Q9BXU1 1019 aa22.97■■□□□ 1.27
FAM239A-203ENST00000456563 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
FAM239A-203ENST00000456563 ZNF330Q9Y3S2 320 aaPredicted RBP22.97■■□□□ 1.27
FAM239A-203ENST00000456563 SLC16A10Q8TF71 515 aa22.95■■□□□ 1.26
FAM239A-203ENST00000456563 PDGFDQ9GZP0 370 aaPredicted RBP22.95■■□□□ 1.26
FAM239A-203ENST00000456563 NARFQ9UHQ1 456 aa22.95■■□□□ 1.26
FAM239A-203ENST00000456563 USP42Q9H9J4 1324 aaKnown RBP22.94■■□□□ 1.26
FAM239A-203ENST00000456563 TCERG1O14776 1098 aaKnown RBP22.94■■□□□ 1.26
FAM239A-203ENST00000456563 MSH5O43196 834 aa22.94■■□□□ 1.26
FAM239A-203ENST00000456563 DZIP3Q86Y13 1208 aaKnown RBP22.94■■□□□ 1.26
FAM239A-203ENST00000456563 SLC4A2P04920 1241 aa22.93■■□□□ 1.26
FAM239A-203ENST00000456563 TBC1D2BQ9UPU7 963 aa22.93■■□□□ 1.26
FAM239A-203ENST00000456563 ZPR1O75312 459 aa22.92■■□□□ 1.26
FAM239A-203ENST00000456563 ALDH1L2Q3SY69 923 aa22.92■■□□□ 1.26
FAM239A-203ENST00000456563 COPS6Q7L5N1 327 aa22.92■■□□□ 1.26
FAM239A-203ENST00000456563 XAGE3Q8WTP9 111 aa22.92■■□□□ 1.26
FAM239A-203ENST00000456563 SRP68Q9UHB9 627 aaKnown RBP22.92■■□□□ 1.26
FAM239A-203ENST00000456563 CASZ1Q86V15 1759 aa22.91■■□□□ 1.26
FAM239A-203ENST00000456563 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
FAM239A-203ENST00000456563 RGL2O15211 777 aa22.91■■□□□ 1.26
FAM239A-203ENST00000456563 CAMTA2O94983 1202 aa22.91■■□□□ 1.26
FAM239A-203ENST00000456563 TTLL7Q6ZT98 887 aa22.91■■□□□ 1.26
FAM239A-203ENST00000456563 ARXQ96QS3 562 aa22.91■■□□□ 1.26
FAM239A-203ENST00000456563 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
FAM239A-203ENST00000456563 ERVV-1B6SEH8 477 aa22.9■■□□□ 1.26
FAM239A-203ENST00000456563 GYS1P13807 737 aa22.9■■□□□ 1.26
FAM239A-203ENST00000456563 USPL1Q5W0Q7 1092 aa22.9■■□□□ 1.26
FAM239A-203ENST00000456563 KIF6Q6ZMV9 814 aa22.9■■□□□ 1.26
FAM239A-203ENST00000456563 SSH1Q8WYL5 1049 aa22.9■■□□□ 1.26
FAM239A-203ENST00000456563 MAP3K15Q6ZN16 1313 aa22.89■■□□□ 1.26
FAM239A-203ENST00000456563 RARSP54136 660 aaKnown RBP22.89■■□□□ 1.25
FAM239A-203ENST00000456563 AIMP1Q12904 312 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms