RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 IPO8O15397 1037 aaKnown RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 BRPF1P55201 1214 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 ZC3H6P61129 1189 aaKnown RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 BRINP3Q76B58 766 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 LRRC59Q96AG4 307 aaKnown RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 HSP90AB1P08238 724 aaKnown RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 DDIT3P35638 169 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 MVPQ14764 893 aaKnown RBP9.34□□□□□ -0.91
HDAC9-218ENST00000456174 ANKRD24Q8TF21 1146 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 AXIN2Q9Y2T1 843 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
HDAC9-218ENST00000456174 SPATA31A3Q5VYP0 1347 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 CAMTA1Q9Y6Y1 1673 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 CLGNO14967 610 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
HDAC9-218ENST00000456174 PRIMPOLQ96LW4 560 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 PSEN1P49768 467 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 GABPB1Q06547 395 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-218ENST00000456174 CABLES1Q8TDN4 633 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 MIS18AQ9NYP9 233 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 COL18A1P39060 1754 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 KIAA0232Q92628 1395 aa9.33□□□□□ -0.92
HDAC9-218ENST00000456174 TULP2O00295 520 aa9.32□□□□□ -0.92
HDAC9-218ENST00000456174 HMGN5P82970 282 aaKnown RBP9.32□□□□□ -0.92
HDAC9-218ENST00000456174 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
HDAC9-218ENST00000456174 UPF2Q9HAU5 1272 aaKnown RBP9.32□□□□□ -0.92
HDAC9-218ENST00000456174 LMO7Q8WWI1 1683 aa9.32□□□□□ -0.92
HDAC9-218ENST00000456174 KRT24Q2M2I5 525 aa9.32□□□□□ -0.92
HDAC9-218ENST00000456174 TSPYL1Q9H0U9 437 aa9.32□□□□□ -0.92
HDAC9-218ENST00000456174 TSPYL4Q9UJ04 414 aa9.32□□□□□ -0.92
HDAC9-218ENST00000456174 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-218ENST00000456174 KCNJ4P48050 445 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 IL17REQ8NFR9 667 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 ARHGAP45Q92619 1136 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 DDX19BQ9UMR2 479 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 ERBB3P21860 1342 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 CCDC66A2RUB6 948 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 IGHDP01880 384 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-218ENST00000456174 TMEM57Q8N5G2 664 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
HDAC9-218ENST00000456174 GEMIN8Q9NWZ8 242 aaKnown RBP9.31□□□□□ -0.92
HDAC9-218ENST00000456174 FAM208AQ9UK61 1670 aaKnown RBP9.3□□□□□ -0.92
HDAC9-218ENST00000456174 SPDYE4A6NLX3 237 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 ZNF445P59923 1031 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 PLEKHO1Q53GL0 409 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-218ENST00000456174 ZNF771Q7L3S4 317 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-218ENST00000456174 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 ABCC6O95255 1503 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-218ENST00000456174 AMOTQ4VCS5 1084 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 FEZ1Q99689 392 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 PCDHB15Q9Y5E8 787 aa9.3□□□□□ -0.92
HDAC9-218ENST00000456174 TAF7Q15545 349 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-218ENST00000456174 ZNF530Q6P9A1 599 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-218ENST00000456174 TIGD1Q96MW7 591 aa9.29□□□□□ -0.92
HDAC9-218ENST00000456174 CCDC39Q9UFE4 941 aa9.29□□□□□ -0.92
HDAC9-218ENST00000456174 HDAC5Q9UQL6 1122 aa9.29□□□□□ -0.92
HDAC9-218ENST00000456174 CEMIPQ8WUJ3 1361 aa9.29□□□□□ -0.92
HDAC9-218ENST00000456174 CHRNA2Q15822 529 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 AKAP4Q5JQC9 854 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.92
HDAC9-218ENST00000456174 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 NLRP2Q9NX02 1062 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 KIF3AQ9Y496 699 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 U3KPZ7 1027 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-218ENST00000456174 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 CPDO75976 1380 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 CACNA1FO60840 1977 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 API5Q9BZZ5 524 aaKnown RBP9.28□□□□□ -0.92
HDAC9-218ENST00000456174 LGR6Q9HBX8 967 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 KCNG1Q9UIX4 513 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 KDM3BQ7LBC6 1761 aa9.28□□□□□ -0.92
HDAC9-218ENST00000456174 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.92
HDAC9-218ENST00000456174 CAPN2P17655 700 aa9.27□□□□□ -0.92
HDAC9-218ENST00000456174 RAB3GAP1Q15042 981 aa9.27□□□□□ -0.92
HDAC9-218ENST00000456174 C1orf141Q5JVX7 400 aa9.27□□□□□ -0.92
HDAC9-218ENST00000456174 TNPO1Q92973 898 aaKnown RBP9.27□□□□□ -0.92
HDAC9-218ENST00000456174 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.92
HDAC9-218ENST00000456174 CLEC17AQ6ZS10 378 aa9.27□□□□□ -0.93
HDAC9-218ENST00000456174 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
HDAC9-218ENST00000456174 ZBTB40Q9NUA8 1239 aa9.27□□□□□ -0.93
HDAC9-218ENST00000456174 OGFRQ9NZT2 677 aa9.27□□□□□ -0.93
HDAC9-218ENST00000456174 ABCC4O15439 1325 aa9.27□□□□□ -0.93
HDAC9-218ENST00000456174 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-218ENST00000456174 KLHL40Q2TBA0 621 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 MPRIPQ6WCQ1 1025 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 SMC5Q8IY18 1101 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 RAPGEF4Q8WZA2 1011 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 ANKRD7Q92527 254 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 SLFN14P0C7P3 912 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 TEFQ10587 303 aa9.26□□□□□ -0.93
HDAC9-218ENST00000456174 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-218ENST00000456174 DCAF8L1A6NGE4 600 aa9.25□□□□□ -0.93
HDAC9-218ENST00000456174 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms