RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 MMP10P09238 476 aa15.72■□□□□ 0.11
TMEM56-202ENST00000455656 RFC4P35249 363 aa15.72■□□□□ 0.11
TMEM56-202ENST00000455656 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
TMEM56-202ENST00000455656 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
TMEM56-202ENST00000455656 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
TMEM56-202ENST00000455656 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
TMEM56-202ENST00000455656 FMNL2Q96PY5 1086 aa15.71■□□□□ 0.11
TMEM56-202ENST00000455656 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.11
TMEM56-202ENST00000455656 CD2APQ9Y5K6 639 aa15.71■□□□□ 0.11
TMEM56-202ENST00000455656 UTRNP46939 3433 aa15.71■□□□□ 0.1
TMEM56-202ENST00000455656 C10orf71Q711Q0 1435 aa15.7■□□□□ 0.1
TMEM56-202ENST00000455656 EIF5P55010 431 aaKnown RBP15.7■□□□□ 0.1
TMEM56-202ENST00000455656 FKBP8Q14318 412 aa15.7■□□□□ 0.1
TMEM56-202ENST00000455656 TAF7Q15545 349 aaPredicted RBP15.7■□□□□ 0.1
TMEM56-202ENST00000455656 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
TMEM56-202ENST00000455656 BCL2L12Q9HB09 334 aa15.7■□□□□ 0.1
TMEM56-202ENST00000455656 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
TMEM56-202ENST00000455656 MAPK8IP3Q9UPT6 1336 aa15.69■□□□□ 0.1
TMEM56-202ENST00000455656 TMPOP42166 694 aaKnown RBP15.69■□□□□ 0.1
TMEM56-202ENST00000455656 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
TMEM56-202ENST00000455656 PXDNLA1KZ92 1463 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 NEFMP07197 916 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
TMEM56-202ENST00000455656 TM4SF1P30408 202 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 DDR1Q08345 913 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
TMEM56-202ENST00000455656 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 NARFQ9UHQ1 456 aa15.68■□□□□ 0.1
TMEM56-202ENST00000455656 STARD3NLO95772 234 aa15.67■□□□□ 0.1
TMEM56-202ENST00000455656 A1BGP04217 495 aa15.67■□□□□ 0.1
TMEM56-202ENST00000455656 YBX3P16989 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
TMEM56-202ENST00000455656 CCDC184Q52MB2 194 aa15.67■□□□□ 0.1
TMEM56-202ENST00000455656 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
TMEM56-202ENST00000455656 GOLGB1Q14789 3259 aaKnown RBP15.66■□□□□ 0.1
TMEM56-202ENST00000455656 IL6STP40189 918 aaPredicted RBP15.66■□□□□ 0.1
TMEM56-202ENST00000455656 RIPK4P57078 832 aa15.66■□□□□ 0.1
TMEM56-202ENST00000455656 RUNDC1Q96C34 613 aa15.66■□□□□ 0.1
TMEM56-202ENST00000455656 POLRMTO00411 1230 aaKnown RBP15.65■□□□□ 0.1
TMEM56-202ENST00000455656 SNRPA1P09661 255 aaKnown RBP15.65■□□□□ 0.1
TMEM56-202ENST00000455656 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
TMEM56-202ENST00000455656 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
TMEM56-202ENST00000455656 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
TMEM56-202ENST00000455656 EIF4A1P60842 406 aaKnown RBP15.64■□□□□ 0.09
TMEM56-202ENST00000455656 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
TMEM56-202ENST00000455656 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
TMEM56-202ENST00000455656 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
TMEM56-202ENST00000455656 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.09
TMEM56-202ENST00000455656 NBPF26B4DH59 902 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 ZPR1O75312 459 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 PIP4K2AP48426 406 aaPredicted RBP15.63■□□□□ 0.09
TMEM56-202ENST00000455656 NFIXQ14938 502 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 GPR162Q16538 588 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 NBPF10Q6P3W6 841 aaKnown RBP15.63■□□□□ 0.09
TMEM56-202ENST00000455656 NBPF15Q8N660 670 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 PARP3Q9Y6F1 533 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 ARFGEF1Q9Y6D6 1849 aa15.63■□□□□ 0.09
TMEM56-202ENST00000455656 GIGYF1O75420 1035 aaPredicted RBP15.62■□□□□ 0.09
TMEM56-202ENST00000455656 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
TMEM56-202ENST00000455656 YY1P25490 414 aa15.61■□□□□ 0.09
TMEM56-202ENST00000455656 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
TMEM56-202ENST00000455656 NUP98P52948 1817 aa15.6■□□□□ 0.09
TMEM56-202ENST00000455656 A0A087WZG4 1122 aa15.6■□□□□ 0.09
TMEM56-202ENST00000455656 KCNA3P22001 575 aa15.6■□□□□ 0.09
TMEM56-202ENST00000455656 TGFB2P61812 414 aa15.6■□□□□ 0.09
TMEM56-202ENST00000455656 LMOD3Q0VAK6 560 aa15.6■□□□□ 0.09
TMEM56-202ENST00000455656 NEUROD2Q15784 382 aa15.59■□□□□ 0.09
TMEM56-202ENST00000455656 TBC1D9BQ66K14 1250 aa15.59■□□□□ 0.09
TMEM56-202ENST00000455656 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
TMEM56-202ENST00000455656 BABAM1Q9NWV8 329 aa15.59■□□□□ 0.09
TMEM56-202ENST00000455656 COL11A2P13942 1736 aaPredicted RBP15.59■□□□□ 0.09
TMEM56-202ENST00000455656 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
TMEM56-202ENST00000455656 A0A0G2JLW4 131 aa15.58■□□□□ 0.08
TMEM56-202ENST00000455656 DPEP1P16444 411 aa15.58■□□□□ 0.08
TMEM56-202ENST00000455656 DZIP3Q86Y13 1208 aaKnown RBP15.58■□□□□ 0.08
TMEM56-202ENST00000455656 TSPYL4Q9UJ04 414 aa15.58■□□□□ 0.08
TMEM56-202ENST00000455656 WWC3Q9ULE0 1092 aa15.58■□□□□ 0.08
TMEM56-202ENST00000455656 ZNF330Q9Y3S2 320 aaPredicted RBP15.58■□□□□ 0.08
TMEM56-202ENST00000455656 CHL1O00533 1208 aa15.57■□□□□ 0.08
TMEM56-202ENST00000455656 SERPINB2P05120 415 aa15.57■□□□□ 0.08
TMEM56-202ENST00000455656 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
TMEM56-202ENST00000455656 APAF1O14727 1248 aa15.56■□□□□ 0.08
TMEM56-202ENST00000455656 GRIN3BO60391 1043 aa15.55■□□□□ 0.08
TMEM56-202ENST00000455656 PDIA6Q15084 440 aa15.55■□□□□ 0.08
TMEM56-202ENST00000455656 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
TMEM56-202ENST00000455656 CHRNA5P30532 468 aa15.54■□□□□ 0.08
TMEM56-202ENST00000455656 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
TMEM56-202ENST00000455656 BICDL1Q6ZP65 573 aa15.54■□□□□ 0.08
TMEM56-202ENST00000455656 ERBB4Q15303 1308 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 RGL2O15211 777 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 ANP32CO43423 234 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 HLFQ16534 295 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 PRR5LQ6MZQ0 368 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 ANKRD36CQ5JPF3 1778 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 ARFGEF2Q9Y6D5 1785 aa15.53■□□□□ 0.08
TMEM56-202ENST00000455656 CACNA1SQ13698 1873 aa15.52■□□□□ 0.08
TMEM56-202ENST00000455656 ADCY9O60503 1353 aa15.52■□□□□ 0.08
TMEM56-202ENST00000455656 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
TMEM56-202ENST00000455656 SBF1O95248 1867 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms