RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CYP19A1P11511 503 aaPredicted RBP21.29■■□□□ 1
CCDC90B-202ENST00000455220 MRPL50Q8N5N7 158 aaKnown RBP21.29■■□□□ 1
CCDC90B-202ENST00000455220 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
CCDC90B-202ENST00000455220 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
CCDC90B-202ENST00000455220 TAF1LQ8IZX4 1826 aa21.29■■□□□ 1
CCDC90B-202ENST00000455220 RREB1Q92766 1687 aa21.28■■□□□ 1
CCDC90B-202ENST00000455220 SLC27A3Q5K4L6 730 aa21.28■■□□□ 1
CCDC90B-202ENST00000455220 NECTIN2Q92692 538 aa21.28■■□□□ 1
CCDC90B-202ENST00000455220 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
CCDC90B-202ENST00000455220 STK31Q9BXU1 1019 aa21.28■■□□□ 1
CCDC90B-202ENST00000455220 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
CCDC90B-202ENST00000455220 PDIA6Q15084 440 aa21.27■■□□□ 1
CCDC90B-202ENST00000455220 CHPF2Q9P2E5 772 aa21.27■■□□□ 1
CCDC90B-202ENST00000455220 DBF4Q9UBU7 674 aaPredicted RBP21.27■■□□□ 1
CCDC90B-202ENST00000455220 DDX21Q9NR30 783 aaKnown RBP eCLIP21.27■□□□□ 0.99
CCDC90B-202ENST00000455220 RNF123Q5XPI4 1314 aa21.27■□□□□ 0.99
CCDC90B-202ENST00000455220 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
CCDC90B-202ENST00000455220 TXNRD1Q16881 649 aa21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 CCDC125Q86Z20 511 aa21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 PROM2Q8N271 834 aa21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 LINC00116Q8NCU8 138 aa21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 LRRC4BQ9NT99 713 aa21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 MYH14Q7Z406 1995 aaKnown RBP21.25■□□□□ 0.99
CCDC90B-202ENST00000455220 KIF16BQ96L93 1317 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 A1BGP04217 495 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 KCNQ4P56696 695 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 PROSER3Q2NL68 480 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
CCDC90B-202ENST00000455220 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
CCDC90B-202ENST00000455220 CRKLP46109 303 aaKnown RBP21.23■□□□□ 0.99
CCDC90B-202ENST00000455220 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
CCDC90B-202ENST00000455220 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
CCDC90B-202ENST00000455220 C4BP0C0L5 1744 aa21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 ANXA1P04083 346 aa21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 HMGB2P26583 209 aaKnown RBP21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 RC3H1Q5TC82 1133 aaKnown RBP21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 CAMKK2Q96RR4 588 aa21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 CCDC87Q9NVE4 849 aa21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 ZBTB1Q9Y2K1 713 aa21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 SUPT16HQ9Y5B9 1047 aaKnown RBP21.22■□□□□ 0.99
CCDC90B-202ENST00000455220 BAG6P46379 1132 aa21.21■□□□□ 0.99
CCDC90B-202ENST00000455220 RRP1P56182 461 aaKnown RBP21.21■□□□□ 0.99
CCDC90B-202ENST00000455220 G2E3Q7L622 706 aa21.21■□□□□ 0.99
CCDC90B-202ENST00000455220 PIP4K2AP48426 406 aaPredicted RBP21.2■□□□□ 0.98
CCDC90B-202ENST00000455220 FLIIQ13045 1269 aa21.2■□□□□ 0.98
CCDC90B-202ENST00000455220 ARHGAP45Q92619 1136 aa21.2■□□□□ 0.98
CCDC90B-202ENST00000455220 PHAXQ9H814 394 aaKnown RBP21.2■□□□□ 0.98
CCDC90B-202ENST00000455220 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
CCDC90B-202ENST00000455220 PTPRCP08575 1304 aa21.2■□□□□ 0.98
CCDC90B-202ENST00000455220 MYL6BP14649 208 aa21.19■□□□□ 0.98
CCDC90B-202ENST00000455220 IL6STP40189 918 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-202ENST00000455220 EN1Q05925 392 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-202ENST00000455220 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-202ENST00000455220 IPO8O15397 1037 aaKnown RBP21.18■□□□□ 0.98
CCDC90B-202ENST00000455220 CANXP27824 592 aaKnown RBP21.18■□□□□ 0.98
CCDC90B-202ENST00000455220 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
CCDC90B-202ENST00000455220 FRAT1Q92837 279 aaPredicted RBP21.18■□□□□ 0.98
CCDC90B-202ENST00000455220 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
CCDC90B-202ENST00000455220 EZH2Q15910 746 aaKnown RBP21.17■□□□□ 0.98
CCDC90B-202ENST00000455220 PLIN1O60240 522 aa21.16■□□□□ 0.98
CCDC90B-202ENST00000455220 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
CCDC90B-202ENST00000455220 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
CCDC90B-202ENST00000455220 XAGE3Q8WTP9 111 aa21.16■□□□□ 0.98
CCDC90B-202ENST00000455220 UPF1Q92900 1129 aaKnown RBP eCLIP21.16■□□□□ 0.98
CCDC90B-202ENST00000455220 TRIM27P14373 513 aa21.15■□□□□ 0.98
CCDC90B-202ENST00000455220 RPS6KA4O75676 772 aa21.14■□□□□ 0.98
CCDC90B-202ENST00000455220 FKBP5Q13451 457 aaPredicted RBP21.14■□□□□ 0.98
CCDC90B-202ENST00000455220 COPS6Q7L5N1 327 aa21.14■□□□□ 0.98
CCDC90B-202ENST00000455220 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.98
CCDC90B-202ENST00000455220 UBR3Q6ZT12 1888 aa21.14■□□□□ 0.98
CCDC90B-202ENST00000455220 NUP188Q5SRE5 1749 aa21.14■□□□□ 0.97
CCDC90B-202ENST00000455220 AK7Q96M32 723 aa21.13■□□□□ 0.97
CCDC90B-202ENST00000455220 ADCY9O60503 1353 aa21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 COL15A1P39059 1388 aa21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 GNPATO15228 680 aa21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 DDX58O95786 925 aaKnown RBP21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 AKT1S1Q96B36 256 aa21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 ABCC4O15439 1325 aa21.12■□□□□ 0.97
CCDC90B-202ENST00000455220 PDE3AQ14432 1141 aa21.11■□□□□ 0.97
CCDC90B-202ENST00000455220 KSR2Q6VAB6 950 aa21.11■□□□□ 0.97
CCDC90B-202ENST00000455220 TTLL7Q6ZT98 887 aa21.11■□□□□ 0.97
CCDC90B-202ENST00000455220 TNNQ9UQP3 1299 aa21.11■□□□□ 0.97
CCDC90B-202ENST00000455220 RTCBQ9Y3I0 505 aaKnown RBP21.11■□□□□ 0.97
CCDC90B-202ENST00000455220 PXDNLA1KZ92 1463 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 ZNF330Q9Y3S2 320 aaPredicted RBP21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 ARFGEF2Q9Y6D5 1785 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 MS4A1P11836 297 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 ZNF827Q17R98 1081 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 ANKRD13DQ6ZTN6 518 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 AMIGO3Q86WK7 504 aa21.1■□□□□ 0.97
CCDC90B-202ENST00000455220 DZIP1LQ8IYY4 767 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms