RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
HDAC9-217ENST00000455069 RTCBQ9Y3I0 505 aaKnown RBP14.95□□□□□ -0.02
HDAC9-217ENST00000455069 ANP32CO43423 234 aa14.94□□□□□ -0.02
HDAC9-217ENST00000455069 RIPK4P57078 832 aa14.94□□□□□ -0.02
HDAC9-217ENST00000455069 ZBTB1Q9Y2K1 713 aa14.94□□□□□ -0.02
HDAC9-217ENST00000455069 GOLGB1Q14789 3259 aaKnown RBP14.93□□□□□ -0.02
HDAC9-217ENST00000455069 PRAMEF22A3QJZ6 481 aa14.93□□□□□ -0.02
HDAC9-217ENST00000455069 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
HDAC9-217ENST00000455069 ARHGEF1Q92888 912 aaKnown RBP14.93□□□□□ -0.02
HDAC9-217ENST00000455069 FMNL2Q96PY5 1086 aa14.93□□□□□ -0.02
HDAC9-217ENST00000455069 CCDC87Q9NVE4 849 aa14.93□□□□□ -0.02
HDAC9-217ENST00000455069 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
HDAC9-217ENST00000455069 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
HDAC9-217ENST00000455069 SOS1Q07889 1333 aaPredicted RBP14.92□□□□□ -0.02
HDAC9-217ENST00000455069 POLD1P28340 1107 aa14.92□□□□□ -0.02
HDAC9-217ENST00000455069 TAF7Q15545 349 aaPredicted RBP14.92□□□□□ -0.02
HDAC9-217ENST00000455069 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
HDAC9-217ENST00000455069 BCORQ6W2J9 1755 aa14.91□□□□□ -0.02
HDAC9-217ENST00000455069 NEUROD2Q15784 382 aa14.91□□□□□ -0.02
HDAC9-217ENST00000455069 TRAPPC3LQ5T215 181 aa14.91□□□□□ -0.02
HDAC9-217ENST00000455069 RNF216Q9NWF9 866 aaPredicted RBP14.91□□□□□ -0.02
HDAC9-217ENST00000455069 KIF13BQ9NQT8 1826 aa14.91□□□□□ -0.02
HDAC9-217ENST00000455069 COL15A1P39059 1388 aa14.9□□□□□ -0.02
HDAC9-217ENST00000455069 KIAA1551Q9HCM1 1747 aa14.9□□□□□ -0.02
HDAC9-217ENST00000455069 PNISRQ8TF01 805 aaKnown RBP14.9□□□□□ -0.02
HDAC9-217ENST00000455069 MRS2Q9HD23 443 aa14.9□□□□□ -0.02
HDAC9-217ENST00000455069 SRP68Q9UHB9 627 aaKnown RBP14.9□□□□□ -0.02
HDAC9-217ENST00000455069 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
HDAC9-217ENST00000455069 GYS1P13807 737 aa14.89□□□□□ -0.03
HDAC9-217ENST00000455069 USP16Q9Y5T5 823 aa14.89□□□□□ -0.03
HDAC9-217ENST00000455069 AFDNP55196 1824 aaKnown RBP14.88□□□□□ -0.03
HDAC9-217ENST00000455069 APAF1O14727 1248 aa14.88□□□□□ -0.03
HDAC9-217ENST00000455069 A1BGP04217 495 aa14.88□□□□□ -0.03
HDAC9-217ENST00000455069 RFC4P35249 363 aa14.88□□□□□ -0.03
HDAC9-217ENST00000455069 LMOD3Q0VAK6 560 aa14.88□□□□□ -0.03
HDAC9-217ENST00000455069 ZNF784Q8NCA9 323 aaPredicted RBP14.88□□□□□ -0.03
HDAC9-217ENST00000455069 STARD3NLO95772 234 aa14.87□□□□□ -0.03
HDAC9-217ENST00000455069 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
HDAC9-217ENST00000455069 EIF5P55010 431 aaKnown RBP14.87□□□□□ -0.03
HDAC9-217ENST00000455069 EIF4A1P60842 406 aaKnown RBP14.87□□□□□ -0.03
HDAC9-217ENST00000455069 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
HDAC9-217ENST00000455069 TEX13AQ9BXU3 409 aaPredicted RBP14.87□□□□□ -0.03
HDAC9-217ENST00000455069 NRXN2Q9P2S2 1712 aa14.86□□□□□ -0.03
HDAC9-217ENST00000455069 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
HDAC9-217ENST00000455069 PIP4K2AP48426 406 aaPredicted RBP14.86□□□□□ -0.03
HDAC9-217ENST00000455069 FKBP8Q14318 412 aa14.86□□□□□ -0.03
HDAC9-217ENST00000455069 NLGN2Q8NFZ4 835 aa14.86□□□□□ -0.03
HDAC9-217ENST00000455069 GIGYF1O75420 1035 aaPredicted RBP14.85□□□□□ -0.03
HDAC9-217ENST00000455069 MMP10P09238 476 aa14.85□□□□□ -0.03
HDAC9-217ENST00000455069 GPR162Q16538 588 aa14.85□□□□□ -0.03
HDAC9-217ENST00000455069 USPL1Q5W0Q7 1092 aa14.85□□□□□ -0.03
HDAC9-217ENST00000455069 BCL2L12Q9HB09 334 aa14.85□□□□□ -0.03
HDAC9-217ENST00000455069 TSPYL4Q9UJ04 414 aa14.85□□□□□ -0.03
HDAC9-217ENST00000455069 N4BP2Q86UW6 1770 aaPredicted RBP14.85□□□□□ -0.03
HDAC9-217ENST00000455069 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
HDAC9-217ENST00000455069 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
HDAC9-217ENST00000455069 NBPF10Q6P3W6 841 aaKnown RBP14.84□□□□□ -0.03
HDAC9-217ENST00000455069 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
HDAC9-217ENST00000455069 NBPF15Q8N660 670 aa14.84□□□□□ -0.03
HDAC9-217ENST00000455069 NARFQ9UHQ1 456 aa14.84□□□□□ -0.03
HDAC9-217ENST00000455069 BRCA1P38398 1863 aaKnown RBP14.84□□□□□ -0.03
HDAC9-217ENST00000455069 C10orf71Q711Q0 1435 aa14.83□□□□□ -0.03
HDAC9-217ENST00000455069 CHL1O00533 1208 aa14.83□□□□□ -0.04
HDAC9-217ENST00000455069 IL6STP40189 918 aaPredicted RBP14.83□□□□□ -0.04
HDAC9-217ENST00000455069 DDR1Q08345 913 aa14.83□□□□□ -0.04
HDAC9-217ENST00000455069 BABAM1Q9NWV8 329 aa14.82□□□□□ -0.04
HDAC9-217ENST00000455069 NUP98P52948 1817 aa14.81□□□□□ -0.04
HDAC9-217ENST00000455069 KRT24Q2M2I5 525 aa14.81□□□□□ -0.04
HDAC9-217ENST00000455069 ZNF330Q9Y3S2 320 aaPredicted RBP14.81□□□□□ -0.04
HDAC9-217ENST00000455069 ANKRD31Q8N7Z5 1873 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 POLRMTO00411 1230 aaKnown RBP14.8□□□□□ -0.04
HDAC9-217ENST00000455069 ZPR1O75312 459 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 TM4SF1P30408 202 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
HDAC9-217ENST00000455069 TBC1D2BQ9UPU7 963 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 CD2APQ9Y5K6 639 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 PXDNLA1KZ92 1463 aa14.8□□□□□ -0.04
HDAC9-217ENST00000455069 CAMTA2O94983 1202 aa14.79□□□□□ -0.04
HDAC9-217ENST00000455069 YBX3P16989 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDAC9-217ENST00000455069 NFIXQ14938 502 aa14.79□□□□□ -0.04
HDAC9-217ENST00000455069 CFAP44Q96MT7 982 aa14.79□□□□□ -0.04
HDAC9-217ENST00000455069 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
HDAC9-217ENST00000455069 DLEC1Q9Y238 1755 aa14.78□□□□□ -0.04
HDAC9-217ENST00000455069 A0A087WZG4 1122 aa14.78□□□□□ -0.04
HDAC9-217ENST00000455069 DZIP3Q86Y13 1208 aaKnown RBP14.78□□□□□ -0.04
HDAC9-217ENST00000455069 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
HDAC9-217ENST00000455069 PARP3Q9Y6F1 533 aa14.78□□□□□ -0.04
HDAC9-217ENST00000455069 GRIN3BO60391 1043 aa14.77□□□□□ -0.05
HDAC9-217ENST00000455069 TBC1D9BQ66K14 1250 aa14.77□□□□□ -0.05
HDAC9-217ENST00000455069 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.05
HDAC9-217ENST00000455069 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.05
HDAC9-217ENST00000455069 CARMIL3Q8ND23 1372 aa14.76□□□□□ -0.05
HDAC9-217ENST00000455069 ANKRD36CQ5JPF3 1778 aa14.76□□□□□ -0.05
HDAC9-217ENST00000455069 COL11A2P13942 1736 aaPredicted RBP14.76□□□□□ -0.05
HDAC9-217ENST00000455069 PDIA6Q15084 440 aa14.76□□□□□ -0.05
HDAC9-217ENST00000455069 CCDC27Q2M243 656 aa14.76□□□□□ -0.05
HDAC9-217ENST00000455069 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
HDAC9-217ENST00000455069 IFT57Q9NWB7 429 aa14.76□□□□□ -0.05
HDAC9-217ENST00000455069 ERBB4Q15303 1308 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms