RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MMP10P09238 476 aa19.32■□□□□ 0.68
HSPG2-207ENST00000453796 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
HSPG2-207ENST00000453796 SRP68Q9UHB9 627 aaKnown RBP19.32■□□□□ 0.68
HSPG2-207ENST00000453796 COL15A1P39059 1388 aa19.32■□□□□ 0.68
HSPG2-207ENST00000453796 TEX13AQ9BXU3 409 aaPredicted RBP19.3■□□□□ 0.68
HSPG2-207ENST00000453796 LAMB4A4D0S4 1761 aa19.29■□□□□ 0.68
HSPG2-207ENST00000453796 MAPK8IP3Q9UPT6 1336 aa19.29■□□□□ 0.68
HSPG2-207ENST00000453796 STARD3NLO95772 234 aa19.29■□□□□ 0.68
HSPG2-207ENST00000453796 TAF7Q15545 349 aaPredicted RBP19.29■□□□□ 0.68
HSPG2-207ENST00000453796 AFDNP55196 1824 aaKnown RBP19.29■□□□□ 0.68
HSPG2-207ENST00000453796 SCN7AQ01118 1682 aa19.29■□□□□ 0.68
HSPG2-207ENST00000453796 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
HSPG2-207ENST00000453796 C10orf71Q711Q0 1435 aa19.28■□□□□ 0.68
HSPG2-207ENST00000453796 EIF5P55010 431 aaKnown RBP19.28■□□□□ 0.68
HSPG2-207ENST00000453796 FKBP8Q14318 412 aa19.28■□□□□ 0.68
HSPG2-207ENST00000453796 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
HSPG2-207ENST00000453796 BRCA1P38398 1863 aaKnown RBP19.27■□□□□ 0.68
HSPG2-207ENST00000453796 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
HSPG2-207ENST00000453796 NARFQ9UHQ1 456 aa19.27■□□□□ 0.68
HSPG2-207ENST00000453796 BCORQ6W2J9 1755 aa19.27■□□□□ 0.67
HSPG2-207ENST00000453796 PRAMEF22A3QJZ6 481 aa19.26■□□□□ 0.67
HSPG2-207ENST00000453796 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
HSPG2-207ENST00000453796 GPR162Q16538 588 aa19.26■□□□□ 0.67
HSPG2-207ENST00000453796 USPL1Q5W0Q7 1092 aa19.26■□□□□ 0.67
HSPG2-207ENST00000453796 BCL2L12Q9HB09 334 aa19.26■□□□□ 0.67
HSPG2-207ENST00000453796 USP16Q9Y5T5 823 aa19.26■□□□□ 0.67
HSPG2-207ENST00000453796 PXDNLA1KZ92 1463 aa19.25■□□□□ 0.67
HSPG2-207ENST00000453796 ZPR1O75312 459 aa19.25■□□□□ 0.67
HSPG2-207ENST00000453796 A1BGP04217 495 aa19.25■□□□□ 0.67
HSPG2-207ENST00000453796 YBX3P16989 372 aaKnown RBP eCLIP19.25■□□□□ 0.676e-9■■■□□ 14.9
HSPG2-207ENST00000453796 TM4SF1P30408 202 aa19.25■□□□□ 0.67
HSPG2-207ENST00000453796 TMPOP42166 694 aaKnown RBP19.25■□□□□ 0.67
HSPG2-207ENST00000453796 DDR1Q08345 913 aa19.25■□□□□ 0.67
HSPG2-207ENST00000453796 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
HSPG2-207ENST00000453796 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
HSPG2-207ENST00000453796 YY1P25490 414 aa19.24■□□□□ 0.67
HSPG2-207ENST00000453796 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
HSPG2-207ENST00000453796 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
HSPG2-207ENST00000453796 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
HSPG2-207ENST00000453796 PARP3Q9Y6F1 533 aa19.24■□□□□ 0.67
HSPG2-207ENST00000453796 POLRMTO00411 1230 aaKnown RBP19.23■□□□□ 0.67
HSPG2-207ENST00000453796 RIPK4P57078 832 aa19.23■□□□□ 0.67
HSPG2-207ENST00000453796 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
HSPG2-207ENST00000453796 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
HSPG2-207ENST00000453796 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
HSPG2-207ENST00000453796 PELP1Q8IZL8 1130 aaKnown RBP19.22■□□□□ 0.67
HSPG2-207ENST00000453796 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
HSPG2-207ENST00000453796 A0A087WZG4 1122 aa19.2■□□□□ 0.66
HSPG2-207ENST00000453796 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
HSPG2-207ENST00000453796 TGFB2P61812 414 aa19.2■□□□□ 0.66
HSPG2-207ENST00000453796 NFIXQ14938 502 aa19.2■□□□□ 0.66
HSPG2-207ENST00000453796 NBPF26B4DH59 902 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 GRIN3BO60391 1043 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 GIGYF1O75420 1035 aaPredicted RBP19.18■□□□□ 0.66
HSPG2-207ENST00000453796 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
HSPG2-207ENST00000453796 LMOD3Q0VAK6 560 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 NBPF10Q6P3W6 841 aaKnown RBP19.18■□□□□ 0.66
HSPG2-207ENST00000453796 NBPF15Q8N660 670 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 TRIM35Q9UPQ4 493 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 TBC1D2BQ9UPU7 963 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
HSPG2-207ENST00000453796 ARFGEF1Q9Y6D6 1849 aa19.18■□□□□ 0.66
HSPG2-207ENST00000453796 DLEC1Q9Y238 1755 aa19.17■□□□□ 0.66
HSPG2-207ENST00000453796 CAMTA2O94983 1202 aa19.17■□□□□ 0.66
HSPG2-207ENST00000453796 CCDC184Q52MB2 194 aa19.17■□□□□ 0.66
HSPG2-207ENST00000453796 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
HSPG2-207ENST00000453796 A0A0G2JLW4 131 aa19.16■□□□□ 0.66
HSPG2-207ENST00000453796 KCNA3P22001 575 aa19.16■□□□□ 0.66
HSPG2-207ENST00000453796 BABAM1Q9NWV8 329 aa19.16■□□□□ 0.66
HSPG2-207ENST00000453796 ZNF330Q9Y3S2 320 aaPredicted RBP19.16■□□□□ 0.66
HSPG2-207ENST00000453796 DPEP1P16444 411 aa19.15■□□□□ 0.66
HSPG2-207ENST00000453796 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
HSPG2-207ENST00000453796 TBC1D9BQ66K14 1250 aa19.15■□□□□ 0.66
HSPG2-207ENST00000453796 DZIP3Q86Y13 1208 aaKnown RBP19.15■□□□□ 0.66
HSPG2-207ENST00000453796 TSPYL4Q9UJ04 414 aa19.15■□□□□ 0.66
HSPG2-207ENST00000453796 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
HSPG2-207ENST00000453796 SERPINB2P05120 415 aa19.14■□□□□ 0.65
HSPG2-207ENST00000453796 NUP98P52948 1817 aa19.14■□□□□ 0.65
HSPG2-207ENST00000453796 CARMIL3Q8ND23 1372 aa19.11■□□□□ 0.65
HSPG2-207ENST00000453796 CHL1O00533 1208 aa19.11■□□□□ 0.65
HSPG2-207ENST00000453796 BICDL1Q6ZP65 573 aa19.11■□□□□ 0.65
HSPG2-207ENST00000453796 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
HSPG2-207ENST00000453796 APAF1O14727 1248 aa19.1■□□□□ 0.65
HSPG2-207ENST00000453796 RGL2O15211 777 aa19.1■□□□□ 0.65
HSPG2-207ENST00000453796 CLEC4GQ6UXB4 293 aa19.1■□□□□ 0.65
HSPG2-207ENST00000453796 COL11A2P13942 1736 aaPredicted RBP19.09■□□□□ 0.65
HSPG2-207ENST00000453796 CHRNA5P30532 468 aa19.09■□□□□ 0.65
HSPG2-207ENST00000453796 ZNF784Q8NCA9 323 aaPredicted RBP19.09■□□□□ 0.65
HSPG2-207ENST00000453796 ERBB4Q15303 1308 aa19.08■□□□□ 0.65
HSPG2-207ENST00000453796 ANP32CO43423 234 aa19.08■□□□□ 0.64
HSPG2-207ENST00000453796 BCS1LQ9Y276 419 aa19.08■□□□□ 0.64
HSPG2-207ENST00000453796 PRR5LQ6MZQ0 368 aa19.07■□□□□ 0.64
HSPG2-207ENST00000453796 LRP10Q7Z4F1 713 aa19.07■□□□□ 0.64
HSPG2-207ENST00000453796 SETDB2Q96T68 719 aa19.07■□□□□ 0.64
HSPG2-207ENST00000453796 PIM2Q9P1W9 311 aa19.07■□□□□ 0.64
HSPG2-207ENST00000453796 PDIA6Q15084 440 aa19.06■□□□□ 0.64
HSPG2-207ENST00000453796 ZNF652Q9Y2D9 606 aa19.06■□□□□ 0.64
HSPG2-207ENST00000453796 ADCY9O60503 1353 aa19.06■□□□□ 0.64
HSPG2-207ENST00000453796 ZNF853P0CG23 659 aa19.05■□□□□ 0.64
HSPG2-207ENST00000453796 HLFQ16534 295 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms