RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
CDC42EP3-203ENST00000453555 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP3-203ENST00000453555 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
CDC42EP3-203ENST00000453555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
CDC42EP3-203ENST00000453555 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
CDC42EP3-203ENST00000453555 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
CDC42EP3-203ENST00000453555 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
CDC42EP3-203ENST00000453555 MRC1P22897 1456 aa12.64□□□□□ -0.39
CDC42EP3-203ENST00000453555 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
CDC42EP3-203ENST00000453555 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP3-203ENST00000453555 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
CDC42EP3-203ENST00000453555 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
CDC42EP3-203ENST00000453555 SSFA2P28290 1259 aa12.62□□□□□ -0.39
CDC42EP3-203ENST00000453555 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
CDC42EP3-203ENST00000453555 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
CDC42EP3-203ENST00000453555 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
CDC42EP3-203ENST00000453555 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
CDC42EP3-203ENST00000453555 FCHSD2O94868 740 aa12.61□□□□□ -0.39
CDC42EP3-203ENST00000453555 TEFQ10587 303 aa12.61□□□□□ -0.39
CDC42EP3-203ENST00000453555 RALBP1Q15311 655 aa12.61□□□□□ -0.39
CDC42EP3-203ENST00000453555 RTCBQ9Y3I0 505 aaKnown RBP12.61□□□□□ -0.39
CDC42EP3-203ENST00000453555 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
CDC42EP3-203ENST00000453555 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
CDC42EP3-203ENST00000453555 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
CDC42EP3-203ENST00000453555 CRKLP46109 303 aaKnown RBP12.59□□□□□ -0.39
CDC42EP3-203ENST00000453555 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
CDC42EP3-203ENST00000453555 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
CDC42EP3-203ENST00000453555 DNAJC10Q8IXB1 793 aa12.59□□□□□ -0.39
CDC42EP3-203ENST00000453555 MCM10Q7L590 875 aa12.58□□□□□ -0.4
CDC42EP3-203ENST00000453555 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
CDC42EP3-203ENST00000453555 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
CDC42EP3-203ENST00000453555 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
CDC42EP3-203ENST00000453555 NEFMP07197 916 aa12.57□□□□□ -0.4
CDC42EP3-203ENST00000453555 RFC4P35249 363 aa12.57□□□□□ -0.4
CDC42EP3-203ENST00000453555 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
CDC42EP3-203ENST00000453555 MS4A3Q96HJ5 214 aa12.57□□□□□ -0.4
CDC42EP3-203ENST00000453555 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
CDC42EP3-203ENST00000453555 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
CDC42EP3-203ENST00000453555 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 CYP19A1P11511 503 aaPredicted RBP12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 LHX8Q68G74 356 aa12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 CCDC87Q9NVE4 849 aa12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
CDC42EP3-203ENST00000453555 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
CDC42EP3-203ENST00000453555 KCNQ3O43525 872 aa12.55□□□□□ -0.4
CDC42EP3-203ENST00000453555 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
CDC42EP3-203ENST00000453555 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
CDC42EP3-203ENST00000453555 PLEKHF1Q96S99 279 aa12.55□□□□□ -0.4
CDC42EP3-203ENST00000453555 CHD4Q14839 1912 aa12.54□□□□□ -0.4
CDC42EP3-203ENST00000453555 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
CDC42EP3-203ENST00000453555 ZNF496Q96IT1 587 aaPredicted RBP12.54□□□□□ -0.4
CDC42EP3-203ENST00000453555 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
CDC42EP3-203ENST00000453555 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
CDC42EP3-203ENST00000453555 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 MMP10P09238 476 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 GYS1P13807 737 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 NUBP1P53384 320 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 GPR162Q16538 588 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 NLGN1Q8N2Q7 840 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 ZBTB1Q9Y2K1 713 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
CDC42EP3-203ENST00000453555 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
CDC42EP3-203ENST00000453555 FMNL2Q96PY5 1086 aa12.52□□□□□ -0.41
CDC42EP3-203ENST00000453555 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
CDC42EP3-203ENST00000453555 KIF13BQ9NQT8 1826 aa12.52□□□□□ -0.41
CDC42EP3-203ENST00000453555 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
CDC42EP3-203ENST00000453555 STARD3NLO95772 234 aa12.51□□□□□ -0.41
CDC42EP3-203ENST00000453555 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
CDC42EP3-203ENST00000453555 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
CDC42EP3-203ENST00000453555 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
CDC42EP3-203ENST00000453555 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CDC42EP3-203ENST00000453555 PRAMEF22A3QJZ6 481 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 ZPR1O75312 459 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 YY1P25490 414 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 PARP3Q9Y6F1 533 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 COL15A1P39059 1388 aa12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 AFDNP55196 1824 aaKnown RBP12.5□□□□□ -0.41
CDC42EP3-203ENST00000453555 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
CDC42EP3-203ENST00000453555 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
CDC42EP3-203ENST00000453555 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
CDC42EP3-203ENST00000453555 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
CDC42EP3-203ENST00000453555 A1BGP04217 495 aa12.48□□□□□ -0.41
CDC42EP3-203ENST00000453555 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDC42EP3-203ENST00000453555 RIPK4P57078 832 aa12.48□□□□□ -0.41
CDC42EP3-203ENST00000453555 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
CDC42EP3-203ENST00000453555 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms