RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 CTSOP43234 321 aaPredicted RBP7.13□□□□□ -1.27
VPS8-211ENST00000452140 NAA30Q147X3 362 aaPredicted RBP7.13□□□□□ -1.27
VPS8-211ENST00000452140 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
VPS8-211ENST00000452140 CCER1Q8TC90 406 aaPredicted RBP7.13□□□□□ -1.27
VPS8-211ENST00000452140 TSEN34Q9BSV6 310 aaKnown RBP7.13□□□□□ -1.27
VPS8-211ENST00000452140 IQSEC3Q9UPP2 1182 aaPredicted RBP7.13□□□□□ -1.27
VPS8-211ENST00000452140 GNEQ9Y223 722 aaKnown RBP7.13□□□□□ -1.27
VPS8-211ENST00000452140 PARP3Q9Y6F1 533 aa7.13□□□□□ -1.27
VPS8-211ENST00000452140 UPP2O95045 317 aa7.12□□□□□ -1.27
VPS8-211ENST00000452140 BMP2P12643 396 aa7.12□□□□□ -1.27
VPS8-211ENST00000452140 ZNF211Q13398 564 aaPredicted RBP7.12□□□□□ -1.27
VPS8-211ENST00000452140 SCARF1Q14162 830 aa7.12□□□□□ -1.27
VPS8-211ENST00000452140 SH3PXD2AQ5TCZ1 1133 aa7.12□□□□□ -1.27
VPS8-211ENST00000452140 FOXD4L5Q5VV16 416 aaPredicted RBP7.12□□□□□ -1.27
VPS8-211ENST00000452140 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
VPS8-211ENST00000452140 ZSCAN10Q96SZ4 725 aaPredicted RBP7.12□□□□□ -1.27
VPS8-211ENST00000452140 CDK2AP1O14519 115 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 SPINT1O43278 529 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 FOXO3O43524 673 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 MTMR3Q13615 1198 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 SLC27A3Q5K4L6 730 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 TMEM214Q6NUQ4 689 aaKnown RBP7.11□□□□□ -1.27
VPS8-211ENST00000452140 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
VPS8-211ENST00000452140 ZFP42Q96MM3 310 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 CABP1Q9NZU7 370 aa7.11□□□□□ -1.27
VPS8-211ENST00000452140 PSMA6P60900 246 aaKnown RBP7.1□□□□□ -1.27
VPS8-211ENST00000452140 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
VPS8-211ENST00000452140 ZDHHC1Q8WTX9 485 aa7.1□□□□□ -1.27
VPS8-211ENST00000452140 GTF3C2Q8WUA4 911 aaPredicted RBP7.1□□□□□ -1.27
VPS8-211ENST00000452140 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
VPS8-211ENST00000452140 NGLY1Q96IV0 654 aa7.1□□□□□ -1.27
VPS8-211ENST00000452140 ZNF232Q9UNY5 417 aa7.1□□□□□ -1.27
VPS8-211ENST00000452140 H3BM21 787 aa7.09□□□□□ -1.27
VPS8-211ENST00000452140 PPARGC1BQ86YN6 1023 aaKnown RBP7.09□□□□□ -1.27
VPS8-211ENST00000452140 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
VPS8-211ENST00000452140 NBPF15Q8N660 670 aa7.09□□□□□ -1.27
VPS8-211ENST00000452140 C2orf49Q9BVC5 232 aaPredicted RBP7.09□□□□□ -1.27
VPS8-211ENST00000452140 DNMT3AQ9Y6K1 912 aaPredicted RBP7.09□□□□□ -1.27
VPS8-211ENST00000452140 SERTM1A2A2V5 107 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 SOWAHDA6NJG2 315 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 H3BRB1 525 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 EML1O00423 815 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
VPS8-211ENST00000452140 GMPRP36959 345 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 PHKA2P46019 1235 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 PLA2G4AP47712 749 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 RNF144AP50876 292 aaPredicted RBP7.08□□□□□ -1.28
VPS8-211ENST00000452140 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS8-211ENST00000452140 PRICKLE2Q7Z3G6 844 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 ZSCAN1Q8NBB4 408 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 RNF217Q8TC41 542 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 RHBDD1Q8TEB9 315 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 L3MBTL2Q969R5 705 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 GRIP2Q9C0E4 1043 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 SAP130Q9H0E3 1048 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 TUT1Q9H6E5 874 aaKnown RBP7.08□□□□□ -1.28
VPS8-211ENST00000452140 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 CHMP3Q9Y3E7 222 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 HCN4Q9Y3Q4 1203 aa7.08□□□□□ -1.28
VPS8-211ENST00000452140 FIGNL2A6NMB9 653 aa7.07□□□□□ -1.28
VPS8-211ENST00000452140 PTCD1O75127 700 aaKnown RBP7.07□□□□□ -1.28
VPS8-211ENST00000452140 NOS2P35228 1153 aa7.07□□□□□ -1.28
VPS8-211ENST00000452140 TEAD4Q15561 434 aa7.07□□□□□ -1.28
VPS8-211ENST00000452140 C4orf17Q53FE4 359 aa7.07□□□□□ -1.28
VPS8-211ENST00000452140 GNASQ5JWF2 1037 aa7.07□□□□□ -1.28
VPS8-211ENST00000452140 NIFKQ9BYG3 293 aaKnown RBP7.07□□□□□ -1.28
VPS8-211ENST00000452140 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
VPS8-211ENST00000452140 TTLL8A6PVC2 850 aa7.06□□□□□ -1.28
VPS8-211ENST00000452140 RHOQP17081 205 aa7.06□□□□□ -1.28
VPS8-211ENST00000452140 GPC1P35052 558 aa7.06□□□□□ -1.28
VPS8-211ENST00000452140 TXLNAP40222 546 aa7.06□□□□□ -1.28
VPS8-211ENST00000452140 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
VPS8-211ENST00000452140 POU4F2Q12837 409 aa7.06□□□□□ -1.28
VPS8-211ENST00000452140 BIN2Q9UBW5 565 aaPredicted RBP7.06□□□□□ -1.28
VPS8-211ENST00000452140 CCDC9Q9Y3X0 531 aaKnown RBP7.06□□□□□ -1.28
VPS8-211ENST00000452140 VEGFBP49765 207 aa7.05□□□□□ -1.28
VPS8-211ENST00000452140 COX20Q5RI15 118 aa7.05□□□□□ -1.28
VPS8-211ENST00000452140 C16orf46Q6P387 395 aa7.05□□□□□ -1.28
VPS8-211ENST00000452140 STAG2Q8N3U4 1231 aa7.05□□□□□ -1.28
VPS8-211ENST00000452140 COL26A1Q96A83 441 aa7.05□□□□□ -1.28
VPS8-211ENST00000452140 AIDAQ96BJ3 306 aa7.05□□□□□ -1.28
VPS8-211ENST00000452140 ICMTO60725 284 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 POTEAQ6S8J7 498 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 LYSMD3Q7Z3D4 306 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 GLYCTKQ8IVS8 523 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 ALDH16A1Q8IZ83 802 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 PHACTR1Q9C0D0 580 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 LRFN2Q9ULH4 789 aa7.04□□□□□ -1.28
VPS8-211ENST00000452140 SOS2Q07890 1332 aaPredicted RBP7.03□□□□□ -1.28
VPS8-211ENST00000452140 SOBPA7XYQ1 873 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 MAN1A2O60476 641 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
VPS8-211ENST00000452140 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
VPS8-211ENST00000452140 HELQQ8TDG4 1101 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 KLRG1Q96E93 195 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 DNMT3LQ9UJW3 386 aa7.03□□□□□ -1.28
VPS8-211ENST00000452140 ERBB4Q15303 1308 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms