RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
LINC01548-201ENST00000451980 SMAPO00193 183 aa11.11□□□□□ -0.63
LINC01548-201ENST00000451980 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
LINC01548-201ENST00000451980 TATDN2Q93075 761 aa11.11□□□□□ -0.63
LINC01548-201ENST00000451980 COL22A1Q8NFW1 1626 aaPredicted RBP11.1□□□□□ -0.63
LINC01548-201ENST00000451980 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
LINC01548-201ENST00000451980 GCP02774 474 aa11.1□□□□□ -0.63
LINC01548-201ENST00000451980 ARHGEF25Q86VW2 580 aa11.1□□□□□ -0.63
LINC01548-201ENST00000451980 ZNF516Q92618 1163 aa11.1□□□□□ -0.63
LINC01548-201ENST00000451980 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
LINC01548-201ENST00000451980 HOXC9P31274 260 aa11.09□□□□□ -0.63
LINC01548-201ENST00000451980 GGCXP38435 758 aa11.09□□□□□ -0.63
LINC01548-201ENST00000451980 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC01548-201ENST00000451980 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
LINC01548-201ENST00000451980 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
LINC01548-201ENST00000451980 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
LINC01548-201ENST00000451980 LMO7Q8WWI1 1683 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 FLT4P35916 1363 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 KIF24Q5T7B8 1368 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 PPM1GO15355 546 aaPredicted RBP11.08□□□□□ -0.64
LINC01548-201ENST00000451980 DIAPH1O60610 1272 aaKnown RBP11.08□□□□□ -0.64
LINC01548-201ENST00000451980 CFAP53Q96M91 514 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
LINC01548-201ENST00000451980 DLG5Q8TDM6 1919 aa11.07□□□□□ -0.64
LINC01548-201ENST00000451980 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
LINC01548-201ENST00000451980 WDR43Q15061 677 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC01548-201ENST00000451980 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
LINC01548-201ENST00000451980 ZBED9Q6R2W3 1325 aa11.07□□□□□ -0.64
LINC01548-201ENST00000451980 APLP1P51693 650 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 KCNH5Q8NCM2 988 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 IP6K1Q92551 441 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 ZNF521Q96K83 1311 aa11.06□□□□□ -0.64
LINC01548-201ENST00000451980 CPDO75976 1380 aa11.05□□□□□ -0.64
LINC01548-201ENST00000451980 U2AF1L5P0DN76 240 aaPredicted RBP11.05□□□□□ -0.64
LINC01548-201ENST00000451980 U2AF1Q01081 240 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01548-201ENST00000451980 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
LINC01548-201ENST00000451980 AEBP1Q8IUX7 1158 aa11.05□□□□□ -0.64
LINC01548-201ENST00000451980 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
LINC01548-201ENST00000451980 ABCC6O95255 1503 aa11.04□□□□□ -0.64
LINC01548-201ENST00000451980 UBAP1LF5GYI3 381 aa11.04□□□□□ -0.64
LINC01548-201ENST00000451980 C3orf80F5H4A9 247 aa11.04□□□□□ -0.64
LINC01548-201ENST00000451980 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
LINC01548-201ENST00000451980 TOM1O60784 492 aa11.04□□□□□ -0.64
LINC01548-201ENST00000451980 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
LINC01548-201ENST00000451980 ZNF775Q96BV0 537 aaPredicted RBP11.04□□□□□ -0.64
LINC01548-201ENST00000451980 EYA1Q99502 592 aa11.04□□□□□ -0.64
LINC01548-201ENST00000451980 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
LINC01548-201ENST00000451980 IGSF1Q8N6C5 1336 aa11.04□□□□□ -0.64
LINC01548-201ENST00000451980 KDRP35968 1356 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 APAF1O14727 1248 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 AMPHP49418 695 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 PIP4K2BP78356 416 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 PHACTR3Q96KR7 559 aa11.03□□□□□ -0.64
LINC01548-201ENST00000451980 HMOX1P09601 288 aa11.02□□□□□ -0.65
LINC01548-201ENST00000451980 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
LINC01548-201ENST00000451980 RNF40O75150 1001 aa11.01□□□□□ -0.65
LINC01548-201ENST00000451980 FCHSD2O94868 740 aa11.01□□□□□ -0.65
LINC01548-201ENST00000451980 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
LINC01548-201ENST00000451980 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
LINC01548-201ENST00000451980 NUDT18Q6ZVK8 323 aa11.01□□□□□ -0.65
LINC01548-201ENST00000451980 TCP11L2Q8N4U5 519 aa11.01□□□□□ -0.65
LINC01548-201ENST00000451980 LRRC59Q96AG4 307 aaKnown RBP11.01□□□□□ -0.65
LINC01548-201ENST00000451980 NBPF6Q5VWK0 638 aa11□□□□□ -0.65
LINC01548-201ENST00000451980 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
LINC01548-201ENST00000451980 NBPF4Q96M43 638 aa11□□□□□ -0.65
LINC01548-201ENST00000451980 RRP7AQ9Y3A4 280 aaKnown RBP11□□□□□ -0.65
LINC01548-201ENST00000451980 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
LINC01548-201ENST00000451980 FAM83GA6ND36 823 aa10.99□□□□□ -0.65
LINC01548-201ENST00000451980 TMPOP42166 694 aaKnown RBP10.99□□□□□ -0.65
LINC01548-201ENST00000451980 PRIM1P49642 420 aaKnown RBP10.99□□□□□ -0.65
LINC01548-201ENST00000451980 ANKRD24Q8TF21 1146 aa10.99□□□□□ -0.65
LINC01548-201ENST00000451980 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
LINC01548-201ENST00000451980 PLCH1Q4KWH8 1693 aa10.98□□□□□ -0.65
LINC01548-201ENST00000451980 NRAPQ86VF7 1730 aa10.98□□□□□ -0.65
LINC01548-201ENST00000451980 COL14A1Q05707 1796 aaKnown RBP10.98□□□□□ -0.65
LINC01548-201ENST00000451980 VIRMAQ69YN4 1812 aaKnown RBP10.98□□□□□ -0.65
LINC01548-201ENST00000451980 ZBTB7CA1YPR0 619 aa10.98□□□□□ -0.65
LINC01548-201ENST00000451980 SLF2Q8IX21 1173 aa10.98□□□□□ -0.65
LINC01548-201ENST00000451980 USHBP1Q8N6Y0 703 aa10.98□□□□□ -0.65
LINC01548-201ENST00000451980 COL5A2P05997 1499 aaPredicted RBP10.98□□□□□ -0.65
LINC01548-201ENST00000451980 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
LINC01548-201ENST00000451980 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
LINC01548-201ENST00000451980 ZPR1O75312 459 aa10.96□□□□□ -0.65
LINC01548-201ENST00000451980 COPS2P61201 443 aa10.96□□□□□ -0.65
LINC01548-201ENST00000451980 CCDC27Q2M243 656 aa10.96□□□□□ -0.65
LINC01548-201ENST00000451980 TRMT2AQ8IZ69 625 aaKnown RBP10.96□□□□□ -0.65
LINC01548-201ENST00000451980 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
LINC01548-201ENST00000451980 LRP6O75581 1613 aa10.95□□□□□ -0.66
LINC01548-201ENST00000451980 GRXCR2A6NFK2 248 aa10.95□□□□□ -0.66
LINC01548-201ENST00000451980 CENPBP07199 599 aaPredicted RBP10.95□□□□□ -0.66
LINC01548-201ENST00000451980 NFE2L2Q16236 605 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms