RNA–Protein interactions for RNA: ENST00000451686.5

ITSN1-220, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 501 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-220ENST00000451686 ZNF316A6NFI3 1004 aaPredicted RBP29.01■■■□□ 2.23
ITSN1-220ENST00000451686 FMNL2Q96PY5 1086 aa29■■■□□ 2.23
ITSN1-220ENST00000451686 CD2APQ9Y5K6 639 aa29■■■□□ 2.23
ITSN1-220ENST00000451686 COL15A1P39059 1388 aa29■■■□□ 2.23
ITSN1-220ENST00000451686 N4BP2Q86UW6 1770 aaPredicted RBP28.99■■■□□ 2.23
ITSN1-220ENST00000451686 NEFMP07197 916 aa28.99■■■□□ 2.23
ITSN1-220ENST00000451686 RFC4P35249 363 aa28.99■■■□□ 2.23
ITSN1-220ENST00000451686 NLGN1Q8N2Q7 840 aa28.99■■■□□ 2.23
ITSN1-220ENST00000451686 MAPK8IP3Q9UPT6 1336 aa28.98■■■□□ 2.23
ITSN1-220ENST00000451686 C10orf71Q711Q0 1435 aa28.98■■■□□ 2.23
ITSN1-220ENST00000451686 SRP68Q9UHB9 627 aaKnown RBP28.97■■■□□ 2.23
ITSN1-220ENST00000451686 MMP10P09238 476 aa28.96■■■□□ 2.23
ITSN1-220ENST00000451686 EIF5P55010 431 aaKnown RBP28.96■■■□□ 2.23
ITSN1-220ENST00000451686 TAF7Q15545 349 aaPredicted RBP28.96■■■□□ 2.23
ITSN1-220ENST00000451686 TEX13AQ9BXU3 409 aaPredicted RBP28.96■■■□□ 2.23
ITSN1-220ENST00000451686 STARD3NLO95772 234 aa28.95■■■□□ 2.22
ITSN1-220ENST00000451686 KLHL34Q8N239 644 aa28.94■■■□□ 2.22
ITSN1-220ENST00000451686 TMPOP42166 694 aaKnown RBP28.93■■■□□ 2.22
ITSN1-220ENST00000451686 FKBP8Q14318 412 aa28.93■■■□□ 2.22
ITSN1-220ENST00000451686 THUMPD2Q9BTF0 503 aaKnown RBP28.93■■■□□ 2.22
ITSN1-220ENST00000451686 NARFQ9UHQ1 456 aa28.92■■■□□ 2.22
ITSN1-220ENST00000451686 ADAMTS8Q9UP79 889 aa28.92■■■□□ 2.22
ITSN1-220ENST00000451686 BCL2L12Q9HB09 334 aa28.91■■■□□ 2.22
ITSN1-220ENST00000451686 PXDNLA1KZ92 1463 aa28.91■■■□□ 2.22
ITSN1-220ENST00000451686 PRAMEF22A3QJZ6 481 aa28.9■■■□□ 2.22
ITSN1-220ENST00000451686 USP16Q9Y5T5 823 aa28.9■■■□□ 2.22
ITSN1-220ENST00000451686 DLEC1Q9Y238 1755 aa28.9■■■□□ 2.22
ITSN1-220ENST00000451686 DDR1Q08345 913 aa28.89■■■□□ 2.22
ITSN1-220ENST00000451686 ARFGEF1Q9Y6D6 1849 aa28.88■■■□□ 2.21
ITSN1-220ENST00000451686 DCAF8L1A6NGE4 600 aa28.88■■■□□ 2.21
ITSN1-220ENST00000451686 SNRPA1P09661 255 aaKnown RBP28.88■■■□□ 2.21
ITSN1-220ENST00000451686 CANXP27824 592 aaKnown RBP28.88■■■□□ 2.21
ITSN1-220ENST00000451686 TM4SF1P30408 202 aa28.88■■■□□ 2.21
ITSN1-220ENST00000451686 IL6STP40189 918 aaPredicted RBP28.88■■■□□ 2.21
ITSN1-220ENST00000451686 WDR43Q15061 677 aaKnown RBP eCLIP28.88■■■□□ 2.21
ITSN1-220ENST00000451686 USPL1Q5W0Q7 1092 aa28.88■■■□□ 2.21
ITSN1-220ENST00000451686 CCDC146Q8IYE0 955 aa28.88■■■□□ 2.21
ITSN1-220ENST00000451686 PNISRQ8TF01 805 aaKnown RBP28.88■■■□□ 2.21
ITSN1-220ENST00000451686 RUNDC1Q96C34 613 aa28.88■■■□□ 2.21
ITSN1-220ENST00000451686 ANKRD31Q8N7Z5 1873 aa28.87■■■□□ 2.21
ITSN1-220ENST00000451686 A1BGP04217 495 aa28.87■■■□□ 2.21
ITSN1-220ENST00000451686 RIPK4P57078 832 aa28.87■■■□□ 2.21
ITSN1-220ENST00000451686 MIS18AQ9NYP9 233 aa28.87■■■□□ 2.21
ITSN1-220ENST00000451686 YBX3P16989 372 aaKnown RBP eCLIP28.85■■■□□ 2.21
ITSN1-220ENST00000451686 CCDC184Q52MB2 194 aa28.85■■■□□ 2.21
ITSN1-220ENST00000451686 POLRMTO00411 1230 aaKnown RBP28.84■■■□□ 2.21
ITSN1-220ENST00000451686 ZPR1O75312 459 aa28.84■■■□□ 2.21
ITSN1-220ENST00000451686 EIF4A1P60842 406 aaKnown RBP28.84■■■□□ 2.21
ITSN1-220ENST00000451686 TRIM35Q9UPQ4 493 aa28.84■■■□□ 2.21
ITSN1-220ENST00000451686 NUP98P52948 1817 aa28.83■■■□□ 2.21
ITSN1-220ENST00000451686 LMOD3Q0VAK6 560 aa28.82■■■□□ 2.2
ITSN1-220ENST00000451686 PARP3Q9Y6F1 533 aa28.82■■■□□ 2.2
ITSN1-220ENST00000451686 A0A087WZG4 1122 aa28.81■■■□□ 2.2
ITSN1-220ENST00000451686 NBPF26B4DH59 902 aa28.81■■■□□ 2.2
ITSN1-220ENST00000451686 GIGYF1O75420 1035 aaPredicted RBP28.81■■■□□ 2.2
ITSN1-220ENST00000451686 NFIXQ14938 502 aa28.81■■■□□ 2.2
ITSN1-220ENST00000451686 NBPF10Q6P3W6 841 aaKnown RBP28.81■■■□□ 2.2
ITSN1-220ENST00000451686 NBPF15Q8N660 670 aa28.81■■■□□ 2.2
ITSN1-220ENST00000451686 BABAM1Q9NWV8 329 aa28.81■■■□□ 2.2
ITSN1-220ENST00000451686 RRP7AQ9Y3A4 280 aaKnown RBP28.81■■■□□ 2.2
ITSN1-220ENST00000451686 GPR162Q16538 588 aa28.79■■■□□ 2.2
ITSN1-220ENST00000451686 CAMTA2O94983 1202 aa28.78■■■□□ 2.2
ITSN1-220ENST00000451686 TGFB2P61812 414 aa28.77■■■□□ 2.2
ITSN1-220ENST00000451686 COL11A2P13942 1736 aaPredicted RBP28.77■■■□□ 2.2
ITSN1-220ENST00000451686 PIP4K2AP48426 406 aaPredicted RBP28.76■■■□□ 2.19
ITSN1-220ENST00000451686 YY1P25490 414 aa28.75■■■□□ 2.19
ITSN1-220ENST00000451686 TBC1D2BQ9UPU7 963 aa28.75■■■□□ 2.19
ITSN1-220ENST00000451686 TSPYL4Q9UJ04 414 aa28.74■■■□□ 2.19
ITSN1-220ENST00000451686 CHL1O00533 1208 aa28.73■■■□□ 2.19
ITSN1-220ENST00000451686 RGL2O15211 777 aa28.73■■■□□ 2.19
ITSN1-220ENST00000451686 KCNA3P22001 575 aa28.73■■■□□ 2.19
ITSN1-220ENST00000451686 NEUROD2Q15784 382 aa28.72■■■□□ 2.19
ITSN1-220ENST00000451686 TBC1D9BQ66K14 1250 aa28.72■■■□□ 2.19
ITSN1-220ENST00000451686 DZIP3Q86Y13 1208 aaKnown RBP28.72■■■□□ 2.19
ITSN1-220ENST00000451686 CARMIL3Q8ND23 1372 aa28.72■■■□□ 2.19
ITSN1-220ENST00000451686 GRIN3BO60391 1043 aa28.71■■■□□ 2.19
ITSN1-220ENST00000451686 ANKRD36CQ5JPF3 1778 aa28.7■■■□□ 2.19
ITSN1-220ENST00000451686 ARFGEF2Q9Y6D5 1785 aa28.7■■■□□ 2.19
ITSN1-220ENST00000451686 APAF1O14727 1248 aa28.7■■■□□ 2.18
ITSN1-220ENST00000451686 DPEP1P16444 411 aa28.7■■■□□ 2.18
ITSN1-220ENST00000451686 PELP1Q8IZL8 1130 aaKnown RBP28.7■■■□□ 2.18
ITSN1-220ENST00000451686 ZNF330Q9Y3S2 320 aaPredicted RBP28.7■■■□□ 2.18
ITSN1-220ENST00000451686 ERBB4Q15303 1308 aa28.69■■■□□ 2.18
ITSN1-220ENST00000451686 ANP32CO43423 234 aa28.69■■■□□ 2.18
ITSN1-220ENST00000451686 SERPINB2P05120 415 aa28.69■■■□□ 2.18
ITSN1-220ENST00000451686 A0A0G2JLW4 131 aa28.68■■■□□ 2.18
ITSN1-220ENST00000451686 LRP10Q7Z4F1 713 aa28.68■■■□□ 2.18
ITSN1-220ENST00000451686 CLEC4GQ6UXB4 293 aa28.67■■■□□ 2.18
ITSN1-220ENST00000451686 SBF1O95248 1867 aa28.67■■■□□ 2.18
ITSN1-220ENST00000451686 ZNF853P0CG23 659 aa28.66■■■□□ 2.18
ITSN1-220ENST00000451686 CACNA1SQ13698 1873 aa28.66■■■□□ 2.18
ITSN1-220ENST00000451686 PDIA6Q15084 440 aa28.64■■■□□ 2.18
ITSN1-220ENST00000451686 CFAP44Q96MT7 982 aa28.64■■■□□ 2.18
ITSN1-220ENST00000451686 MRS2Q9HD23 443 aa28.63■■■□□ 2.17
ITSN1-220ENST00000451686 ADCY9O60503 1353 aa28.62■■■□□ 2.17
ITSN1-220ENST00000451686 BICDL1Q6ZP65 573 aa28.62■■■□□ 2.17
ITSN1-220ENST00000451686 NPM2Q86SE8 214 aaKnown RBP28.62■■■□□ 2.17
ITSN1-220ENST00000451686 WWC3Q9ULE0 1092 aa28.62■■■□□ 2.17
ITSN1-220ENST00000451686 ATP10DQ9P241 1426 aa28.61■■■□□ 2.17
ITSN1-220ENST00000451686 CHRNA5P30532 468 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms